Amino acid dipepetide frequency for Junin mammarenavirus (JUNV) (Junn mammarenavirus)

Apart from single amino acid frequencies one can also calculate so called amino acid dipeptide frequency.

There is 400 possibilites (441 if we consider Xaa as additional 21st amino acid representing all non-standard or unknown amino acids). Thus, if the dipeptides would be present randomly in proteins each amino acid dipeptide should be present with 0.25% frequency. As it is not the case in the nature, for better visablity all more than expected dipepetides are marked by red, and those which are underrepresented are marked by blue in the table.

All values are presented as per milles (‰), therefore need to be multiplied by 10-3.

For more information see sequence space article on Wikipedia.

AlaCysAspGluPheGlyHisIleLysLeuMetAsnProGlnArgSerThrValTrpTyrXaa
Ala
2.088AlaAla: 2.088 ± 1.268
1.492AlaCys: 1.492 ± 0.25
1.79AlaAsp: 1.79 ± 1.152
2.387AlaGlu: 2.387 ± 1.14
1.492AlaPhe: 1.492 ± 0.916
2.685AlaGly: 2.685 ± 0.921
1.193AlaHis: 1.193 ± 1.188
2.983AlaIle: 2.983 ± 1.113
2.387AlaLys: 2.387 ± 2.018
6.862AlaLeu: 6.862 ± 1.519
1.193AlaMet: 1.193 ± 0.465
1.492AlaAsn: 1.492 ± 0.57
1.492AlaPro: 1.492 ± 1.198
0.895AlaGln: 0.895 ± 0.519
0.895AlaArg: 0.895 ± 0.409
2.983AlaSer: 2.983 ± 1.53
0.895AlaThr: 0.895 ± 1.26
4.773AlaVal: 4.773 ± 1.189
0.0AlaTrp: 0.0 ± 0.0
1.79AlaTyr: 1.79 ± 0.702
0.0AlaXaa: 0.0 ± 0.0
Cys
1.193CysAla: 1.193 ± 0.465
0.298CysCys: 0.298 ± 1.275
2.088CysAsp: 2.088 ± 0.81
1.193CysGlu: 1.193 ± 0.689
2.088CysPhe: 2.088 ± 0.653
0.597CysGly: 0.597 ± 0.484
0.597CysHis: 0.597 ± 1.22
0.895CysIle: 0.895 ± 0.409
1.492CysLys: 1.492 ± 1.137
3.282CysLeu: 3.282 ± 1.557
0.597CysMet: 0.597 ± 0.421
2.088CysAsn: 2.088 ± 3.962
1.492CysPro: 1.492 ± 0.916
0.895CysGln: 0.895 ± 0.517
1.492CysArg: 1.492 ± 0.916
1.492CysSer: 1.492 ± 0.556
0.895CysThr: 0.895 ± 1.047
1.79CysVal: 1.79 ± 1.033
0.895CysTrp: 0.895 ± 2.684
1.193CysTyr: 1.193 ± 0.689
0.0CysXaa: 0.0 ± 0.0
Asp
2.387AspAla: 2.387 ± 0.93
1.79AspCys: 1.79 ± 0.817
2.983AspAsp: 2.983 ± 0.608
4.773AspGlu: 4.773 ± 1.304
2.685AspPhe: 2.685 ± 0.574
2.387AspGly: 2.387 ± 1.214
1.193AspHis: 1.193 ± 1.296
4.475AspIle: 4.475 ± 0.624
2.088AspLys: 2.088 ± 1.205
9.248AspLeu: 9.248 ± 2.643
2.983AspMet: 2.983 ± 0.599
2.088AspAsn: 2.088 ± 0.305
2.387AspPro: 2.387 ± 1.001
2.983AspGln: 2.983 ± 0.764
2.685AspArg: 2.685 ± 0.48
3.58AspSer: 3.58 ± 1.417
1.79AspThr: 1.79 ± 1.152
4.773AspVal: 4.773 ± 1.2
1.492AspTrp: 1.492 ± 0.916
1.193AspTyr: 1.193 ± 0.475
0.0AspXaa: 0.0 ± 0.0
Glu
4.475GluAla: 4.475 ± 0.745
0.895GluCys: 0.895 ± 0.517
4.475GluAsp: 4.475 ± 1.851
5.072GluGlu: 5.072 ± 0.78
3.58GluPhe: 3.58 ± 1.414
3.282GluGly: 3.282 ± 0.647
1.193GluHis: 1.193 ± 0.465
3.282GluIle: 3.282 ± 0.647
4.177GluLys: 4.177 ± 2.452
6.265GluLeu: 6.265 ± 2.218
1.79GluMet: 1.79 ± 0.219
2.088GluAsn: 2.088 ± 0.528
1.79GluPro: 1.79 ± 1.298
2.685GluGln: 2.685 ± 1.163
3.282GluArg: 3.282 ± 1.894
3.878GluSer: 3.878 ± 1.268
3.282GluThr: 3.282 ± 0.849
3.58GluVal: 3.58 ± 1.405
0.597GluTrp: 0.597 ± 0.484
1.492GluTyr: 1.492 ± 0.916
0.0GluXaa: 0.0 ± 0.0
Phe
0.597PheAla: 0.597 ± 1.22
1.193PheCys: 1.193 ± 0.475
2.685PheAsp: 2.685 ± 0.607
2.387PheGlu: 2.387 ± 1.377
2.983PhePhe: 2.983 ± 1.348
2.983PheGly: 2.983 ± 0.764
0.895PheHis: 0.895 ± 0.517
2.387PheIle: 2.387 ± 0.59
5.072PheLys: 5.072 ± 0.78
6.563PheLeu: 6.563 ± 2.341
1.492PheMet: 1.492 ± 0.916
1.79PheAsn: 1.79 ± 0.702
0.298PhePro: 0.298 ± 0.172
3.282PheGln: 3.282 ± 1.853
1.79PheArg: 1.79 ± 1.395
5.668PheSer: 5.668 ± 1.064
2.387PheThr: 2.387 ± 0.444
2.685PheVal: 2.685 ± 1.113
1.492PheTrp: 1.492 ± 0.916
1.492PheTyr: 1.492 ± 0.861
0.0PheXaa: 0.0 ± 0.0
Gly
1.492GlyAla: 1.492 ± 1.137
0.895GlyCys: 0.895 ± 0.447
2.983GlyAsp: 2.983 ± 1.14
3.58GlyGlu: 3.58 ± 0.776
2.983GlyPhe: 2.983 ± 0.543
2.387GlyGly: 2.387 ± 1.715
1.492GlyHis: 1.492 ± 0.873
3.58GlyIle: 3.58 ± 0.792
3.878GlyLys: 3.878 ± 2.216
5.072GlyLeu: 5.072 ± 0.646
1.193GlyMet: 1.193 ± 1.366
3.282GlyAsn: 3.282 ± 1.842
1.193GlyPro: 1.193 ± 0.841
2.088GlyGln: 2.088 ± 1.313
2.685GlyArg: 2.685 ± 1.414
5.072GlySer: 5.072 ± 2.119
1.193GlyThr: 1.193 ± 0.465
4.177GlyVal: 4.177 ± 1.245
0.298GlyTrp: 0.298 ± 0.496
2.088GlyTyr: 2.088 ± 0.305
0.0GlyXaa: 0.0 ± 0.0
His
0.298HisAla: 0.298 ± 0.172
0.597HisCys: 0.597 ± 0.992
1.79HisAsp: 1.79 ± 1.651
1.193HisGlu: 1.193 ± 0.689
0.597HisPhe: 0.597 ± 0.484
0.895HisGly: 0.895 ± 0.903
0.895HisHis: 0.895 ± 0.447
0.895HisIle: 0.895 ± 0.447
1.193HisLys: 1.193 ± 0.689
2.983HisLeu: 2.983 ± 1.682
0.298HisMet: 0.298 ± 0.489
0.895HisAsn: 0.895 ± 0.409
1.193HisPro: 1.193 ± 0.475
1.193HisGln: 1.193 ± 1.18
0.895HisArg: 0.895 ± 1.047
2.387HisSer: 2.387 ± 1.152
1.193HisThr: 1.193 ± 0.968
1.492HisVal: 1.492 ± 0.556
0.0HisTrp: 0.0 ± 0.0
0.597HisTyr: 0.597 ± 1.22
0.0HisXaa: 0.0 ± 0.0
Ile
3.282IleAla: 3.282 ± 0.963
2.088IleCys: 2.088 ± 1.198
3.282IleAsp: 3.282 ± 1.319
2.685IleGlu: 2.685 ± 1.026
2.387IlePhe: 2.387 ± 0.958
2.088IleGly: 2.088 ± 0.528
0.895IleHis: 0.895 ± 0.409
1.193IleIle: 1.193 ± 0.968
5.072IleLys: 5.072 ± 1.488
6.862IleLeu: 6.862 ± 2.221
0.895IleMet: 0.895 ± 0.409
3.282IleAsn: 3.282 ± 0.93
2.088IlePro: 2.088 ± 0.906
2.685IleGln: 2.685 ± 1.075
5.967IleArg: 5.967 ± 1.085
5.072IleSer: 5.072 ± 1.9
2.088IleThr: 2.088 ± 2.324
2.387IleVal: 2.387 ± 0.444
0.597IleTrp: 0.597 ± 0.68
0.597IleTyr: 0.597 ± 0.344
0.0IleXaa: 0.0 ± 0.0
Lys
2.088LysAla: 2.088 ± 0.884
1.79LysCys: 1.79 ± 1.53
3.58LysAsp: 3.58 ± 1.811
5.072LysGlu: 5.072 ± 1.551
4.773LysPhe: 4.773 ± 1.916
2.685LysGly: 2.685 ± 0.607
0.895LysHis: 0.895 ± 0.517
2.685LysIle: 2.685 ± 0.574
3.58LysLys: 3.58 ± 1.108
11.038LysLeu: 11.038 ± 4.14
1.193LysMet: 1.193 ± 0.475
4.773LysAsn: 4.773 ± 1.189
2.387LysPro: 2.387 ± 1.542
1.193LysGln: 1.193 ± 0.369
2.088LysArg: 2.088 ± 1.226
6.862LysSer: 6.862 ± 1.203
4.177LysThr: 4.177 ± 2.016
4.773LysVal: 4.773 ± 2.331
1.193LysTrp: 1.193 ± 0.689
2.088LysTyr: 2.088 ± 1.102
0.0LysXaa: 0.0 ± 0.0
Leu
5.072LeuAla: 5.072 ± 0.938
4.773LeuCys: 4.773 ± 2.234
7.458LeuAsp: 7.458 ± 1.767
6.862LeuGlu: 6.862 ± 2.028
5.668LeuPhe: 5.668 ± 0.956
5.37LeuGly: 5.37 ± 1.463
3.282LeuHis: 3.282 ± 1.017
9.248LeuIle: 9.248 ± 2.03
8.652LeuLys: 8.652 ± 2.627
10.74LeuLeu: 10.74 ± 2.327
5.37LeuMet: 5.37 ± 1.154
5.668LeuAsn: 5.668 ± 2.811
3.878LeuPro: 3.878 ± 2.702
2.685LeuGln: 2.685 ± 0.574
6.862LeuArg: 6.862 ± 2.173
11.635LeuSer: 11.635 ± 2.756
5.967LeuThr: 5.967 ± 1.67
7.16LeuVal: 7.16 ± 2.123
1.492LeuTrp: 1.492 ± 0.57
3.878LeuTyr: 3.878 ± 1.506
0.0LeuXaa: 0.0 ± 0.0
Met
2.088MetAla: 2.088 ± 0.859
0.298MetCys: 0.298 ± 0.172
1.193MetAsp: 1.193 ± 0.689
0.895MetGlu: 0.895 ± 0.409
1.193MetPhe: 1.193 ± 0.841
2.685MetGly: 2.685 ± 1.211
0.597MetHis: 0.597 ± 0.484
0.895MetIle: 0.895 ± 0.517
1.79MetLys: 1.79 ± 1.429
2.088MetLeu: 2.088 ± 1.962
0.597MetMet: 0.597 ± 0.344
1.79MetAsn: 1.79 ± 0.219
0.895MetPro: 0.895 ± 0.409
0.597MetGln: 0.597 ± 0.484
0.895MetArg: 0.895 ± 0.409
2.983MetSer: 2.983 ± 0.608
2.387MetThr: 2.387 ± 1.004
1.492MetVal: 1.492 ± 0.25
0.0MetTrp: 0.0 ± 0.0
0.298MetTyr: 0.298 ± 0.172
0.0MetXaa: 0.0 ± 0.0
Asn
2.088AsnAla: 2.088 ± 2.009
0.895AsnCys: 0.895 ± 2.49
2.983AsnAsp: 2.983 ± 1.369
2.088AsnGlu: 2.088 ± 0.81
2.088AsnPhe: 2.088 ± 0.859
2.685AsnGly: 2.685 ± 1.909
0.895AsnHis: 0.895 ± 1.047
3.878AsnIle: 3.878 ± 1.348
4.475AsnLys: 4.475 ± 1.149
7.16AsnLeu: 7.16 ± 1.508
0.597AsnMet: 0.597 ± 0.421
1.79AsnAsn: 1.79 ± 0.751
2.387AsnPro: 2.387 ± 0.444
2.685AsnGln: 2.685 ± 1.181
1.79AsnArg: 1.79 ± 0.219
3.58AsnSer: 3.58 ± 1.043
3.878AsnThr: 3.878 ± 0.973
2.088AsnVal: 2.088 ± 1.205
0.298AsnTrp: 0.298 ± 0.172
0.895AsnTyr: 0.895 ± 1.047
0.0AsnXaa: 0.0 ± 0.0
Pro
1.79ProAla: 1.79 ± 1.82
0.597ProCys: 0.597 ± 0.344
2.983ProAsp: 2.983 ± 0.979
1.193ProGlu: 1.193 ± 0.841
2.387ProPhe: 2.387 ± 0.444
1.492ProGly: 1.492 ± 0.751
1.193ProHis: 1.193 ± 1.359
1.492ProIle: 1.492 ± 0.861
2.983ProLys: 2.983 ± 1.326
4.475ProLeu: 4.475 ± 2.29
0.0ProMet: 0.0 ± 0.948
0.895ProAsn: 0.895 ± 0.519
1.79ProPro: 1.79 ± 2.673
1.79ProGln: 1.79 ± 0.673
1.193ProArg: 1.193 ± 1.009
2.088ProSer: 2.088 ± 1.226
3.878ProThr: 3.878 ± 2.96
2.088ProVal: 2.088 ± 1.237
0.0ProTrp: 0.0 ± 0.0
1.492ProTyr: 1.492 ± 0.751
0.0ProXaa: 0.0 ± 0.0
Gln
1.492GlnAla: 1.492 ± 0.811
0.895GlnCys: 0.895 ± 0.447
1.193GlnAsp: 1.193 ± 0.689
3.878GlnGlu: 3.878 ± 0.502
2.387GlnPhe: 2.387 ± 1.221
3.282GlnGly: 3.282 ± 1.658
0.895GlnHis: 0.895 ± 1.047
2.685GlnIle: 2.685 ± 0.607
1.79GlnLys: 1.79 ± 1.033
2.685GlnLeu: 2.685 ± 0.6
0.597GlnMet: 0.597 ± 0.344
0.298GlnAsn: 0.298 ± 0.496
1.79GlnPro: 1.79 ± 2.673
1.492GlnGln: 1.492 ± 1.319
2.088GlnArg: 2.088 ± 0.859
2.983GlnSer: 2.983 ± 1.262
2.088GlnThr: 2.088 ± 0.653
4.773GlnVal: 4.773 ± 0.948
0.298GlnTrp: 0.298 ± 0.573
1.193GlnTyr: 1.193 ± 0.369
0.0GlnXaa: 0.0 ± 0.0
Arg
2.387ArgAla: 2.387 ± 1.152
1.492ArgCys: 1.492 ± 1.614
2.387ArgAsp: 2.387 ± 1.214
4.177ArgGlu: 4.177 ± 0.607
2.387ArgPhe: 2.387 ± 1.377
3.282ArgGly: 3.282 ± 1.017
0.895ArgHis: 0.895 ± 0.519
0.895ArgIle: 0.895 ± 0.409
3.282ArgLys: 3.282 ± 1.62
7.16ArgLeu: 7.16 ± 1.8
0.298ArgMet: 0.298 ± 0.172
4.773ArgAsn: 4.773 ± 0.788
1.193ArgPro: 1.193 ± 0.689
2.088ArgGln: 2.088 ± 0.528
3.58ArgArg: 3.58 ± 1.689
4.177ArgSer: 4.177 ± 1.056
2.387ArgThr: 2.387 ± 1.004
2.685ArgVal: 2.685 ± 1.191
0.895ArgTrp: 0.895 ± 0.409
2.088ArgTyr: 2.088 ± 1.302
0.0ArgXaa: 0.0 ± 0.0
Ser
1.492SerAla: 1.492 ± 0.57
1.79SerCys: 1.79 ± 0.895
7.757SerAsp: 7.757 ± 1.001
5.072SerGlu: 5.072 ± 0.78
3.878SerPhe: 3.878 ± 1.487
3.878SerGly: 3.878 ± 0.789
2.685SerHis: 2.685 ± 0.6
4.475SerIle: 4.475 ± 1.782
5.37SerLys: 5.37 ± 0.904
11.337SerLeu: 11.337 ± 0.862
2.387SerMet: 2.387 ± 0.444
3.282SerAsn: 3.282 ± 1.391
2.387SerPro: 2.387 ± 1.377
4.177SerGln: 4.177 ± 1.696
5.668SerArg: 5.668 ± 2.068
6.862SerSer: 6.862 ± 2.136
3.282SerThr: 3.282 ± 0.93
5.37SerVal: 5.37 ± 1.444
1.492SerTrp: 1.492 ± 1.556
2.685SerTyr: 2.685 ± 0.6
0.0SerXaa: 0.0 ± 0.0
Thr
1.193ThrAla: 1.193 ± 1.711
1.193ThrCys: 1.193 ± 1.18
1.193ThrAsp: 1.193 ± 0.369
2.387ThrGlu: 2.387 ± 1.209
1.492ThrPhe: 1.492 ± 0.556
3.58ThrGly: 3.58 ± 0.711
0.895ThrHis: 0.895 ± 0.447
3.878ThrIle: 3.878 ± 1.039
4.773ThrLys: 4.773 ± 0.888
5.668ThrLeu: 5.668 ± 1.602
1.79ThrMet: 1.79 ± 0.702
2.088ThrAsn: 2.088 ± 1.113
2.983ThrPro: 2.983 ± 0.938
2.088ThrGln: 2.088 ± 2.088
2.685ThrArg: 2.685 ± 0.6
5.072ThrSer: 5.072 ± 0.78
1.193ThrThr: 1.193 ± 1.188
2.685ThrVal: 2.685 ± 2.575
0.0ThrTrp: 0.0 ± 0.0
0.895ThrTyr: 0.895 ± 0.517
0.0ThrXaa: 0.0 ± 0.0
Val
3.58ValAla: 3.58 ± 1.42
1.79ValCys: 1.79 ± 1.033
3.878ValAsp: 3.878 ± 0.919
4.475ValGlu: 4.475 ± 1.84
2.088ValPhe: 2.088 ± 0.653
4.177ValGly: 4.177 ± 0.748
0.0ValHis: 0.0 ± 0.0
3.878ValIle: 3.878 ± 0.911
5.072ValLys: 5.072 ± 2.434
7.16ValLeu: 7.16 ± 2.381
1.492ValMet: 1.492 ± 0.861
5.668ValAsn: 5.668 ± 2.365
2.387ValPro: 2.387 ± 1.152
2.088ValGln: 2.088 ± 1.226
3.58ValArg: 3.58 ± 1.657
5.37ValSer: 5.37 ± 2.227
2.088ValThr: 2.088 ± 1.226
4.177ValVal: 4.177 ± 1.717
0.597ValTrp: 0.597 ± 0.68
2.387ValTyr: 2.387 ± 1.004
0.0ValXaa: 0.0 ± 0.0
Trp
0.597TrpAla: 0.597 ± 0.344
0.298TrpCys: 0.298 ± 0.573
0.895TrpAsp: 0.895 ± 0.903
0.597TrpGlu: 0.597 ± 0.421
1.193TrpPhe: 1.193 ± 1.296
0.298TrpGly: 0.298 ± 0.172
0.597TrpHis: 0.597 ± 0.484
0.298TrpIle: 0.298 ± 0.573
0.597TrpLys: 0.597 ± 1.22
1.79TrpLeu: 1.79 ± 0.751
0.298TrpMet: 0.298 ± 0.573
0.0TrpAsn: 0.0 ± 0.0
0.895TrpPro: 0.895 ± 0.519
0.0TrpGln: 0.0 ± 0.0
0.298TrpArg: 0.298 ± 0.573
0.895TrpSer: 0.895 ± 1.047
0.298TrpThr: 0.298 ± 0.496
1.492TrpVal: 1.492 ± 0.861
0.0TrpTrp: 0.0 ± 0.0
0.298TrpTyr: 0.298 ± 0.573
0.0TrpXaa: 0.0 ± 0.0
Tyr
2.088TyrAla: 2.088 ± 0.305
1.492TyrCys: 1.492 ± 0.916
2.387TyrAsp: 2.387 ± 0.958
1.193TyrGlu: 1.193 ± 0.841
1.79TyrPhe: 1.79 ± 1.033
0.895TyrGly: 0.895 ± 1.26
0.298TyrHis: 0.298 ± 0.496
1.492TyrIle: 1.492 ± 0.751
1.193TyrLys: 1.193 ± 0.369
3.282TyrLeu: 3.282 ± 1.391
0.298TyrMet: 0.298 ± 0.496
1.193TyrAsn: 1.193 ± 1.366
1.193TyrPro: 1.193 ± 1.009
1.193TyrGln: 1.193 ± 0.689
2.088TyrArg: 2.088 ± 0.81
2.685TyrSer: 2.685 ± 1.113
2.387TyrThr: 2.387 ± 0.444
1.492TyrVal: 1.492 ± 0.25
0.0TyrTrp: 0.0 ± 0.0
0.0TyrTyr: 0.0 ± 0.0
0.0TyrXaa: 0.0 ± 0.0
Xaa
0.0XaaAla: 0.0 ± 0.0
0.0XaaCys: 0.0 ± 0.0
0.0XaaAsp: 0.0 ± 0.0
0.0XaaGlu: 0.0 ± 0.0
0.0XaaPhe: 0.0 ± 0.0
0.0XaaGly: 0.0 ± 0.0
0.0XaaHis: 0.0 ± 0.0
0.0XaaIle: 0.0 ± 0.0
0.0XaaLys: 0.0 ± 0.0
0.0XaaLeu: 0.0 ± 0.0
0.0XaaMet: 0.0 ± 0.0
0.0XaaAsn: 0.0 ± 0.0
0.0XaaPro: 0.0 ± 0.0
0.0XaaGln: 0.0 ± 0.0
0.0XaaArg: 0.0 ± 0.0
0.0XaaSer: 0.0 ± 0.0
0.0XaaThr: 0.0 ± 0.0
0.0XaaVal: 0.0 ± 0.0
0.0XaaTrp: 0.0 ± 0.0
0.0XaaTyr: 0.0 ± 0.0
0.0XaaXaa: 0.0 ± 0.0
Statistics based on 4 proteins (3353 amino acids)

Note: The error has been estimated with the bootstraping (x100) at the protein level

Above dipeptide statistics (among other stats for this proteome) you can download from this CSV file
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski