Aquisalimonas asiatica

Taxonomy: cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Aquisalimonas

Average proteome isoelectric point is 5.91

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3698 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1H8SZY3|A0A1H8SZY3_9GAMM ADP-ribosylglycohydrolase OS=Aquisalimonas asiatica OX=406100 GN=SAMN04488052_103324 PE=4 SV=1
MM1 pKa = 6.49TTRR4 pKa = 11.84TSATTVFCIACASLLNGCFGGSSSGSGAGDD34 pKa = 4.1DD35 pKa = 3.89NDD37 pKa = 3.98GVQPEE42 pKa = 4.34DD43 pKa = 3.48VQVRR47 pKa = 11.84QFDD50 pKa = 3.82ASDD53 pKa = 3.37HH54 pKa = 6.85DD55 pKa = 4.4EE56 pKa = 4.37PVHH59 pKa = 7.08VDD61 pKa = 3.83LSTGEE66 pKa = 4.27VLTLSAGEE74 pKa = 4.28AADD77 pKa = 4.09SEE79 pKa = 4.47AWDD82 pKa = 3.38IALQRR87 pKa = 11.84HH88 pKa = 5.28QISLNGGTSGPGRR101 pKa = 11.84VQGALLDD108 pKa = 4.35GQASFYY114 pKa = 11.46NEE116 pKa = 4.84DD117 pKa = 3.46GTPNASVFTNTGAADD132 pKa = 3.64TLDD135 pKa = 4.08ALLAPVDD142 pKa = 4.23AVDD145 pKa = 4.01SGDD148 pKa = 3.42WVLDD152 pKa = 3.92SITTEE157 pKa = 5.38FGDD160 pKa = 3.26DD161 pKa = 2.86WYY163 pKa = 10.14IYY165 pKa = 11.03DD166 pKa = 4.01FATGEE171 pKa = 4.1FQPDD175 pKa = 3.9PDD177 pKa = 4.27NGWLLRR183 pKa = 11.84SGTGDD188 pKa = 2.56SYY190 pKa = 11.81ARR192 pKa = 11.84VRR194 pKa = 11.84ITEE197 pKa = 4.09LDD199 pKa = 3.37FDD201 pKa = 4.15SRR203 pKa = 11.84AGDD206 pKa = 3.6GVEE209 pKa = 3.83HH210 pKa = 6.59FRR212 pKa = 11.84FEE214 pKa = 4.75FDD216 pKa = 3.37VQVPNTQQFTEE227 pKa = 4.36TAVFTGSLPGGGGDD241 pKa = 3.68LCFDD245 pKa = 3.84VDD247 pKa = 4.03SDD249 pKa = 3.87ATADD253 pKa = 3.72CSGVDD258 pKa = 3.22WDD260 pKa = 4.26IQIGFQGQDD269 pKa = 2.75FYY271 pKa = 11.83LRR273 pKa = 11.84SNSGVSGDD281 pKa = 3.36GDD283 pKa = 3.47GGVFGPFPWSEE294 pKa = 3.9LEE296 pKa = 4.58AYY298 pKa = 10.23DD299 pKa = 4.2SATVTPSGEE308 pKa = 4.43SIAGHH313 pKa = 5.34YY314 pKa = 10.01QPDD317 pKa = 3.76ASTGIFDD324 pKa = 4.23AYY326 pKa = 10.58SWYY329 pKa = 10.54AYY331 pKa = 10.87NLTGQHH337 pKa = 5.6QLWPNYY343 pKa = 8.99RR344 pKa = 11.84VYY346 pKa = 11.03LIDD349 pKa = 4.35SDD351 pKa = 4.24HH352 pKa = 7.44DD353 pKa = 3.73EE354 pKa = 4.7DD355 pKa = 5.52AAAQYY360 pKa = 11.08ALQVINYY367 pKa = 8.91YY368 pKa = 10.83DD369 pKa = 3.48GTGDD373 pKa = 3.37SGHH376 pKa = 7.27PEE378 pKa = 4.0LRR380 pKa = 11.84WRR382 pKa = 11.84QVDD385 pKa = 3.22

Molecular weight: 41.28 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1H8VD67|A0A1H8VD67_9GAMM Uncharacterized protein OS=Aquisalimonas asiatica OX=406100 GN=SAMN04488052_11139 PE=4 SV=1
MM1 pKa = 7.12FRR3 pKa = 11.84MFRR6 pKa = 11.84MFRR9 pKa = 11.84MFRR12 pKa = 11.84MFRR15 pKa = 11.84MFRR18 pKa = 11.84MFRR21 pKa = 11.84MFRR24 pKa = 11.84MFRR27 pKa = 11.84MFRR30 pKa = 11.84VVRR33 pKa = 11.84VVRR36 pKa = 11.84VVRR39 pKa = 11.84VVRR42 pKa = 11.84VVRR45 pKa = 11.84VVRR48 pKa = 3.93

Molecular weight: 6.49 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3698

0

3698

1223554

40

6102

330.9

36.22

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

11.413 ± 0.056

0.854 ± 0.012

6.564 ± 0.045

6.473 ± 0.039

3.373 ± 0.028

8.741 ± 0.041

2.411 ± 0.021

4.332 ± 0.031

1.977 ± 0.03

10.519 ± 0.053

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.491 ± 0.02

2.469 ± 0.025

5.036 ± 0.032

3.616 ± 0.025

7.969 ± 0.043

4.961 ± 0.028

5.184 ± 0.027

7.783 ± 0.035

1.453 ± 0.018

2.38 ± 0.019
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski