Apricot vein clearing associated virus

Taxonomy: Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes; Tymovirales; Betaflexiviridae; Trivirinae; Prunevirus

Average proteome isoelectric point is 7.45

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 4 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    

Protein with the lowest isoelectric point:
>tr|W0UUT5|W0UUT5_9VIRU Coat protein OS=Apricot vein clearing associated virus OX=1343920 GN=CP PE=4 SV=1
MM1 pKa = 7.53ALLYY5 pKa = 7.5RR6 pKa = 11.84TPQVNLLGSFPQKK19 pKa = 10.09HH20 pKa = 5.18VEE22 pKa = 4.1IIYY25 pKa = 9.91NLQFEE30 pKa = 4.71RR31 pKa = 11.84FKK33 pKa = 10.91KK34 pKa = 9.66ICICRR39 pKa = 11.84FCIFLTHH46 pKa = 6.3SEE48 pKa = 4.12KK49 pKa = 10.58NQKK52 pKa = 9.45KK53 pKa = 8.83VASIRR58 pKa = 11.84GWLGVPLHH66 pKa = 5.78PTPYY70 pKa = 9.46LAHH73 pKa = 6.1SHH75 pKa = 6.82PFSKK79 pKa = 10.22MLEE82 pKa = 3.86NHH84 pKa = 6.29ILLNVLPGHH93 pKa = 6.39ITGSWVFSSIKK104 pKa = 8.84PSKK107 pKa = 10.68VEE109 pKa = 3.89SLATKK114 pKa = 10.06GKK116 pKa = 10.3KK117 pKa = 9.64SVLKK121 pKa = 9.64TINRR125 pKa = 11.84LLCAKK130 pKa = 10.54DD131 pKa = 3.63FGRR134 pKa = 11.84YY135 pKa = 9.24DD136 pKa = 3.28VDD138 pKa = 3.45TDD140 pKa = 3.74SSVIRR145 pKa = 11.84SISRR149 pKa = 11.84EE150 pKa = 3.89APDD153 pKa = 3.73ILPEE157 pKa = 4.06PFVRR161 pKa = 11.84AVKK164 pKa = 10.0GRR166 pKa = 11.84NVMIHH171 pKa = 7.11DD172 pKa = 4.35EE173 pKa = 4.28VHH175 pKa = 6.16HH176 pKa = 5.78WTLDD180 pKa = 3.6DD181 pKa = 3.67MLGFLDD187 pKa = 3.63RR188 pKa = 11.84ARR190 pKa = 11.84PNRR193 pKa = 11.84FVFSVVYY200 pKa = 9.53PVEE203 pKa = 3.99LLAGILEE210 pKa = 4.34SQNPKK215 pKa = 9.31MYY217 pKa = 10.48KK218 pKa = 10.22FQDD221 pKa = 3.61SKK223 pKa = 11.24SDD225 pKa = 3.66KK226 pKa = 10.66IVFFPDD232 pKa = 2.84GRR234 pKa = 11.84ASEE237 pKa = 5.23GYY239 pKa = 7.46EE240 pKa = 3.54QRR242 pKa = 11.84ANLRR246 pKa = 11.84WLFCASHH253 pKa = 6.45FRR255 pKa = 11.84TSGSIWTVKK264 pKa = 10.25RR265 pKa = 11.84IYY267 pKa = 10.1SAYY270 pKa = 8.6SHH272 pKa = 6.84HH273 pKa = 6.78LFEE276 pKa = 4.87VVPGNYY282 pKa = 8.06FTDD285 pKa = 4.52EE286 pKa = 3.57IRR288 pKa = 11.84FFNDD292 pKa = 3.33FEE294 pKa = 4.82TIDD297 pKa = 3.76LQCIFKK303 pKa = 10.92SRR305 pKa = 11.84FLCRR309 pKa = 11.84DD310 pKa = 3.95FVPISKK316 pKa = 10.51DD317 pKa = 3.17LVEE320 pKa = 4.55RR321 pKa = 11.84VYY323 pKa = 11.17SYY325 pKa = 9.97LICLKK330 pKa = 10.63KK331 pKa = 10.2PDD333 pKa = 4.22MQSAMAKK340 pKa = 10.07LKK342 pKa = 10.69QLMGDD347 pKa = 3.78DD348 pKa = 3.91LDD350 pKa = 4.24VRR352 pKa = 11.84VQVFFRR358 pKa = 11.84SLVHH362 pKa = 7.08RR363 pKa = 11.84ILNEE367 pKa = 4.01SEE369 pKa = 4.26CFSLFDD375 pKa = 3.77VSIVNKK381 pKa = 8.82WKK383 pKa = 10.83KK384 pKa = 10.33KK385 pKa = 10.04FLDD388 pKa = 4.46FAPDD392 pKa = 3.01WLLNGFMTWKK402 pKa = 9.94SGNFIKK408 pKa = 10.83KK409 pKa = 10.11LGEE412 pKa = 3.91HH413 pKa = 5.54EE414 pKa = 4.49AARR417 pKa = 11.84QVQEE421 pKa = 3.77GAYY424 pKa = 9.61PEE426 pKa = 3.98GWMINLFLANYY437 pKa = 8.16GIRR440 pKa = 11.84MCCHH444 pKa = 4.78QHH446 pKa = 5.83SADD449 pKa = 3.29GVTIEE454 pKa = 4.76TGSGPISFCSLKK466 pKa = 10.06MEE468 pKa = 4.03NHH470 pKa = 6.43FDD472 pKa = 3.7YY473 pKa = 10.87LRR475 pKa = 11.84CLSSGVSKK483 pKa = 10.6EE484 pKa = 3.91HH485 pKa = 6.42TGLLGKK491 pKa = 6.82TTYY494 pKa = 10.32PSGPIINALQGLKK507 pKa = 10.06PKK509 pKa = 10.24SFRR512 pKa = 11.84GRR514 pKa = 11.84SSFFFARR521 pKa = 11.84SNEE524 pKa = 3.19IDD526 pKa = 3.48YY527 pKa = 10.8GHH529 pKa = 6.75NGFKK533 pKa = 10.66YY534 pKa = 9.1RR535 pKa = 11.84TEE537 pKa = 3.54NWFAEE542 pKa = 4.29LDD544 pKa = 3.81DD545 pKa = 5.76FIPSDD550 pKa = 4.76LIFNACLVQVYY561 pKa = 10.67DD562 pKa = 3.98KK563 pKa = 11.02GSKK566 pKa = 9.68IGFHH570 pKa = 7.19KK571 pKa = 11.01DD572 pKa = 2.97NEE574 pKa = 4.26QCYY577 pKa = 10.07AGYY580 pKa = 9.37PILTVNFGLALFEE593 pKa = 4.49FDD595 pKa = 4.47SGEE598 pKa = 4.1AFNLTDD604 pKa = 4.27GDD606 pKa = 4.46TILLSGDD613 pKa = 3.37YY614 pKa = 10.22LRR616 pKa = 11.84KK617 pKa = 9.31KK618 pKa = 8.84RR619 pKa = 11.84HH620 pKa = 5.6RR621 pKa = 11.84VTSLSDD627 pKa = 3.27SRR629 pKa = 11.84ISLTFRR635 pKa = 11.84RR636 pKa = 11.84HH637 pKa = 3.53VCRR640 pKa = 11.84MNKK643 pKa = 9.78SPLEE647 pKa = 3.87FFSNNGKK654 pKa = 9.75LGKK657 pKa = 9.74NKK659 pKa = 10.35CIIHH663 pKa = 6.14AVAMALGQTSNTVANKK679 pKa = 9.66IVAQRR684 pKa = 11.84PDD686 pKa = 3.72LLQCLVDD693 pKa = 6.1DD694 pKa = 5.07EE695 pKa = 4.86MLDD698 pKa = 3.51KK699 pKa = 10.52QTTEE703 pKa = 4.31TICVIMNLHH712 pKa = 5.36ATIVNEE718 pKa = 4.49DD719 pKa = 3.44EE720 pKa = 4.68GEE722 pKa = 4.28TMEE725 pKa = 5.27LNPEE729 pKa = 4.05GLIKK733 pKa = 10.8SSFSVLDD740 pKa = 3.23EE741 pKa = 4.29HH742 pKa = 6.99MMVLSDD748 pKa = 4.95IPNCRR753 pKa = 11.84SKK755 pKa = 10.93KK756 pKa = 10.72GIDD759 pKa = 3.0ICMSPDD765 pKa = 3.35LANSNCAANYY775 pKa = 8.19EE776 pKa = 4.53VTCQNLQVIQYY787 pKa = 9.46QADD790 pKa = 3.41HH791 pKa = 6.31EE792 pKa = 4.34RR793 pKa = 11.84AIKK796 pKa = 10.52LMNSFLAGTTGAVLNEE812 pKa = 3.98LVFKK816 pKa = 10.59GSRR819 pKa = 11.84FFTFMDD825 pKa = 3.64SVNEE829 pKa = 4.08RR830 pKa = 11.84KK831 pKa = 9.72SDD833 pKa = 3.8FVEE836 pKa = 4.11EE837 pKa = 4.3LSFVPGFAGSGKK849 pKa = 10.4SLGLLNEE856 pKa = 4.14VKK858 pKa = 10.39RR859 pKa = 11.84ISRR862 pKa = 11.84EE863 pKa = 3.19IHH865 pKa = 5.34LAKK868 pKa = 10.06EE869 pKa = 4.09KK870 pKa = 10.81KK871 pKa = 10.79GMGKK875 pKa = 10.55GSGKK879 pKa = 9.36GHH881 pKa = 5.76EE882 pKa = 4.2KK883 pKa = 10.54KK884 pKa = 10.34EE885 pKa = 4.1RR886 pKa = 11.84NRR888 pKa = 11.84GNLKK892 pKa = 10.39SMCIISPRR900 pKa = 11.84RR901 pKa = 11.84NLADD905 pKa = 3.41DD906 pKa = 4.01WEE908 pKa = 4.79TKK910 pKa = 10.17LGPSALEE917 pKa = 4.12HH918 pKa = 6.53CSVTTFEE925 pKa = 4.69VLFKK929 pKa = 11.2ASISKK934 pKa = 10.3IKK936 pKa = 10.61LIVVDD941 pKa = 4.84EE942 pKa = 4.35LTLFPNGYY950 pKa = 9.12IDD952 pKa = 5.37LLIFRR957 pKa = 11.84IRR959 pKa = 11.84TEE961 pKa = 4.07SPDD964 pKa = 3.53CKK966 pKa = 10.43LILIFDD972 pKa = 5.01PLQARR977 pKa = 11.84YY978 pKa = 10.3DD979 pKa = 3.89SAQDD983 pKa = 3.41RR984 pKa = 11.84AILGSEE990 pKa = 4.13HH991 pKa = 7.37DD992 pKa = 3.69VDD994 pKa = 6.29LILGDD999 pKa = 4.17SEE1001 pKa = 4.29VDD1003 pKa = 3.17YY1004 pKa = 9.63MYY1006 pKa = 10.56QSKK1009 pKa = 10.14RR1010 pKa = 11.84FEE1012 pKa = 4.17SEE1014 pKa = 3.64EE1015 pKa = 3.95LFNLFEE1021 pKa = 4.67DD1022 pKa = 4.13LKK1024 pKa = 11.02KK1025 pKa = 10.95NEE1027 pKa = 3.62VDD1029 pKa = 3.21AEE1031 pKa = 4.14SRR1033 pKa = 11.84EE1034 pKa = 4.21TGKK1037 pKa = 10.57GAKK1040 pKa = 9.11FRR1042 pKa = 11.84PRR1044 pKa = 11.84MYY1046 pKa = 10.81TNLLTMKK1053 pKa = 10.27VEE1055 pKa = 4.67EE1056 pKa = 4.46EE1057 pKa = 4.17NQGNPIDD1064 pKa = 3.95VLLVGSFDD1072 pKa = 3.76EE1073 pKa = 5.09AGLFASSIKK1082 pKa = 10.07TMTFGEE1088 pKa = 4.58SQGLTVDD1095 pKa = 3.84HH1096 pKa = 6.82AAILLSEE1103 pKa = 4.18NSALSDD1109 pKa = 3.33DD1110 pKa = 4.45HH1111 pKa = 6.79RR1112 pKa = 11.84WLVALTRR1119 pKa = 11.84ARR1121 pKa = 11.84KK1122 pKa = 9.35KK1123 pKa = 8.87VTFLCLHH1130 pKa = 6.62LSGLNGFLSTMEE1142 pKa = 4.05NRR1144 pKa = 11.84LVAAVINKK1152 pKa = 9.65GLVTKK1157 pKa = 10.49KK1158 pKa = 10.06RR1159 pKa = 11.84LSSMVRR1165 pKa = 11.84AKK1167 pKa = 10.85LNYY1170 pKa = 10.03VKK1172 pKa = 10.73FKK1174 pKa = 11.0GLAGKK1179 pKa = 10.34DD1180 pKa = 3.32EE1181 pKa = 4.18VDD1183 pKa = 3.76RR1184 pKa = 11.84EE1185 pKa = 4.06DD1186 pKa = 4.45RR1187 pKa = 11.84LEE1189 pKa = 4.95GDD1191 pKa = 4.15LFLKK1195 pKa = 10.8GVIFLGQRR1203 pKa = 11.84CEE1205 pKa = 3.81IMEE1208 pKa = 4.28PEE1210 pKa = 3.78IVEE1213 pKa = 3.88PVMAKK1218 pKa = 10.47EE1219 pKa = 3.87DD1220 pKa = 3.75MKK1222 pKa = 10.91THH1224 pKa = 6.91FFVCQEE1230 pKa = 4.18NFAQCYY1236 pKa = 9.72NFDD1239 pKa = 4.11NIRR1242 pKa = 11.84AKK1244 pKa = 9.29EE1245 pKa = 3.84LRR1247 pKa = 11.84EE1248 pKa = 3.48FRR1250 pKa = 11.84IGHH1253 pKa = 6.16RR1254 pKa = 11.84VTNQFIDD1261 pKa = 3.34NYY1263 pKa = 10.33EE1264 pKa = 4.12IVQHH1268 pKa = 4.95VQKK1271 pKa = 10.69KK1272 pKa = 7.0HH1273 pKa = 3.97TAGPLRR1279 pKa = 11.84FEE1281 pKa = 5.27AIYY1284 pKa = 9.58PRR1286 pKa = 11.84HH1287 pKa = 6.19CADD1290 pKa = 4.77DD1291 pKa = 4.56DD1292 pKa = 4.26VTFLMAVHH1300 pKa = 6.03KK1301 pKa = 10.23RR1302 pKa = 11.84LRR1304 pKa = 11.84FSNEE1308 pKa = 3.07MKK1310 pKa = 10.36EE1311 pKa = 4.08RR1312 pKa = 11.84EE1313 pKa = 4.22KK1314 pKa = 11.19LEE1316 pKa = 4.21RR1317 pKa = 11.84AHH1319 pKa = 6.08GTGSILFHH1327 pKa = 7.26NLIQKK1332 pKa = 10.48LGLNFTWDD1340 pKa = 3.22NQLFEE1345 pKa = 4.52EE1346 pKa = 4.77CVNDD1350 pKa = 4.36FEE1352 pKa = 5.11CKK1354 pKa = 10.31KK1355 pKa = 10.52LEE1357 pKa = 3.91KK1358 pKa = 10.62SKK1360 pKa = 11.27AVLANHH1366 pKa = 7.16SIRR1369 pKa = 11.84SDD1371 pKa = 3.7NDD1373 pKa = 3.08WSPNWVFLFMKK1384 pKa = 10.36SQLCTKK1390 pKa = 9.82YY1391 pKa = 10.18EE1392 pKa = 3.99KK1393 pKa = 10.72QYY1395 pKa = 11.35VDD1397 pKa = 3.67AKK1399 pKa = 10.81AGQTLACFQHH1409 pKa = 6.36MILVTFAPYY1418 pKa = 9.66CRR1420 pKa = 11.84YY1421 pKa = 9.19MEE1423 pKa = 4.33KK1424 pKa = 10.14QLRR1427 pKa = 11.84AQLPGEE1433 pKa = 4.37IYY1435 pKa = 10.12IHH1437 pKa = 6.14SNKK1440 pKa = 9.7NFNDD1444 pKa = 3.05LNEE1447 pKa = 4.2WVKK1450 pKa = 11.08KK1451 pKa = 10.02HH1452 pKa = 6.64AGDD1455 pKa = 4.19DD1456 pKa = 3.79LCVEE1460 pKa = 4.33SDD1462 pKa = 4.0YY1463 pKa = 11.62EE1464 pKa = 4.94AFDD1467 pKa = 4.04ASQDD1471 pKa = 3.54QYY1473 pKa = 11.54ILSFEE1478 pKa = 4.51LFMMRR1483 pKa = 11.84HH1484 pKa = 4.38MHH1486 pKa = 6.41IPEE1489 pKa = 4.3QIIQAYY1495 pKa = 9.42IDD1497 pKa = 3.67LKK1499 pKa = 11.57VNLGCKK1505 pKa = 9.62LGHH1508 pKa = 5.7FAIMRR1513 pKa = 11.84FTGEE1517 pKa = 3.45FSTFLFNTLANMAFTMCRR1535 pKa = 11.84YY1536 pKa = 7.87EE1537 pKa = 4.25WNSGDD1542 pKa = 4.1PIAFAGDD1549 pKa = 3.5DD1550 pKa = 3.54MCALKK1555 pKa = 10.51NLKK1558 pKa = 8.38VTDD1561 pKa = 3.28QFNNVFEE1568 pKa = 4.98KK1569 pKa = 10.67ISLKK1573 pKa = 10.83AKK1575 pKa = 7.43TQITEE1580 pKa = 3.78VPMFCGWRR1588 pKa = 11.84LSRR1591 pKa = 11.84FGIVKK1596 pKa = 10.11EE1597 pKa = 4.01PEE1599 pKa = 3.63LVYY1602 pKa = 11.03NRR1604 pKa = 11.84FMVALEE1610 pKa = 3.98RR1611 pKa = 11.84GNVKK1615 pKa = 10.52DD1616 pKa = 3.9CLEE1619 pKa = 4.18NYY1621 pKa = 10.1AIEE1624 pKa = 4.12VSYY1627 pKa = 10.55AYY1629 pKa = 10.77SLGEE1633 pKa = 3.91RR1634 pKa = 11.84LFDD1637 pKa = 3.22ILKK1640 pKa = 10.32RR1641 pKa = 11.84EE1642 pKa = 4.09EE1643 pKa = 3.77QLEE1646 pKa = 3.92YY1647 pKa = 9.98HH1648 pKa = 5.5QAVVRR1653 pKa = 11.84FIVKK1657 pKa = 9.94HH1658 pKa = 5.77LGNLRR1663 pKa = 11.84TKK1665 pKa = 10.77VKK1667 pKa = 10.79DD1668 pKa = 3.55LFAEE1672 pKa = 4.05QSNEE1676 pKa = 3.88DD1677 pKa = 3.57SCC1679 pKa = 5.7

Molecular weight:
192.54 kDa
Isoelectric point according different methods:






Protein with the highest isoelectric point:
>tr|W0UU68|W0UU68_9VIRU Replication-associated polyprotein OS=Apricot vein clearing associated virus OX=1343920 PE=4 SV=1
MM1 pKa = 7.42HH2 pKa = 7.68LDD4 pKa = 3.18KK5 pKa = 10.98HH6 pKa = 5.68VLVLGVCLKK15 pKa = 10.84RR16 pKa = 11.84LGLPTGPMSFVLYY29 pKa = 10.58KK30 pKa = 11.11AMLVRR35 pKa = 11.84KK36 pKa = 10.01LEE38 pKa = 4.13IQEE41 pKa = 4.13EE42 pKa = 4.25QAKK45 pKa = 8.87PLCGVSTFAIKK56 pKa = 10.22RR57 pKa = 11.84RR58 pKa = 11.84AKK60 pKa = 10.46RR61 pKa = 11.84LGVCYY66 pKa = 10.06RR67 pKa = 11.84CMRR70 pKa = 11.84VNPKK74 pKa = 10.11FYY76 pKa = 9.74FTTRR80 pKa = 11.84CDD82 pKa = 3.34NLTCHH87 pKa = 6.11FRR89 pKa = 11.84SFGLKK94 pKa = 8.67EE95 pKa = 3.76RR96 pKa = 11.84YY97 pKa = 9.17VRR99 pKa = 11.84FGLGKK104 pKa = 10.25NGVEE108 pKa = 4.56LRR110 pKa = 11.84DD111 pKa = 3.6SGHH114 pKa = 6.73FEE116 pKa = 3.8LTKK119 pKa = 9.71TGKK122 pKa = 10.18VSEE125 pKa = 4.14TSRR128 pKa = 11.84FIEE131 pKa = 4.05IEE133 pKa = 3.67VSRR136 pKa = 11.84CYY138 pKa = 10.32RR139 pKa = 3.35

Molecular weight:
16.11 kDa
Isoelectric point according different methods:






Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

4

0

4

2331

139

1679

582.8

66.57

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.577 ± 1.343

2.445 ± 0.428

5.534 ± 0.702

6.692 ± 0.338

6.221 ± 0.728

5.792 ± 0.672

2.831 ± 0.355

5.663 ± 0.411

7.121 ± 0.599

10.596 ± 0.962

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.746 ± 0.419

5.062 ± 0.637

3.26 ± 0.376

3.303 ± 0.494

5.877 ± 1.018

7.079 ± 1.477

4.462 ± 0.654

6.135 ± 0.458

1.03 ± 0.351

2.574 ± 0.313

Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski