Bathycoccus sp. RCC1105 virus BpV1

Taxonomy: Viruses; Varidnaviria; Bamfordvirae; Nucleocytoviricota; Megaviricetes; Algavirales; Phycodnaviridae; Prasinovirus; unclassified Prasinovirus; Bathycoccus sp. RCC1105 virus BpV

Average proteome isoelectric point is 6.69

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 203 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|E5ESN4|E5ESN4_9PHYC Uncharacterized protein OS=Bathycoccus sp. RCC1105 virus BpV1 OX=880159 GN=BpV1_016 PE=4 SV=1
MM1 pKa = 6.92EE2 pKa = 4.19TQIIDD7 pKa = 3.23VDD9 pKa = 3.96FDD11 pKa = 4.77DD12 pKa = 4.95GFKK15 pKa = 10.88SIAKK19 pKa = 9.69IIKK22 pKa = 9.25DD23 pKa = 3.76CYY25 pKa = 10.55SEE27 pKa = 4.85YY28 pKa = 10.82EE29 pKa = 4.27VALLEE34 pKa = 4.22YY35 pKa = 10.49YY36 pKa = 11.04GDD38 pKa = 4.23GEE40 pKa = 4.25WDD42 pKa = 3.54FDD44 pKa = 4.17TEE46 pKa = 4.22EE47 pKa = 4.22TTTIMKK53 pKa = 10.49DD54 pKa = 3.56SVSGFYY60 pKa = 9.83DD61 pKa = 3.42TTDD64 pKa = 3.4LEE66 pKa = 4.5NTGLYY71 pKa = 9.47EE72 pKa = 3.89KK73 pKa = 9.93LKK75 pKa = 9.56NGMYY79 pKa = 10.39VEE81 pKa = 4.21VDD83 pKa = 3.22EE84 pKa = 6.25SDD86 pKa = 3.63FEE88 pKa = 4.56YY89 pKa = 11.08EE90 pKa = 4.2LASSEE95 pKa = 4.17DD96 pKa = 4.15DD97 pKa = 3.58EE98 pKa = 5.61SEE100 pKa = 4.44SDD102 pKa = 3.56VSLDD106 pKa = 4.23DD107 pKa = 4.45EE108 pKa = 4.64EE109 pKa = 4.43FF110 pKa = 3.93

Molecular weight: 12.71 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|E5ESF7|E5ESF7_9PHYC Uncharacterized protein OS=Bathycoccus sp. RCC1105 virus BpV1 OX=880159 GN=BpV1_142c PE=4 SV=1
MM1 pKa = 7.43ILVMSKK7 pKa = 10.14PLPLSGSEE15 pKa = 3.78PKK17 pKa = 9.05YY18 pKa = 8.32TQRR21 pKa = 11.84LWGRR25 pKa = 11.84TVGVGNNNCYY35 pKa = 10.51AYY37 pKa = 10.43AVGDD41 pKa = 3.92YY42 pKa = 11.2EE43 pKa = 5.75KK44 pKa = 10.42MRR46 pKa = 11.84LQKK49 pKa = 10.55SIPGEE54 pKa = 3.63RR55 pKa = 11.84AGIRR59 pKa = 11.84NLSHH63 pKa = 7.34TYY65 pKa = 9.06TNCKK69 pKa = 9.8GLPKK73 pKa = 10.06RR74 pKa = 11.84VIADD78 pKa = 3.65NPKK81 pKa = 10.05KK82 pKa = 10.65VYY84 pKa = 8.98PAKK87 pKa = 10.06ATEE90 pKa = 4.07KK91 pKa = 10.54CKK93 pKa = 10.31PNHH96 pKa = 6.46FKK98 pKa = 11.47VMMFVAPGNKK108 pKa = 8.85RR109 pKa = 11.84NYY111 pKa = 8.73FRR113 pKa = 11.84QGDD116 pKa = 3.4FHH118 pKa = 7.36FYY120 pKa = 9.04KK121 pKa = 10.18QHH123 pKa = 5.71GAIEE127 pKa = 4.27YY128 pKa = 9.73KK129 pKa = 10.13VKK131 pKa = 10.63KK132 pKa = 9.98GNTYY136 pKa = 10.52EE137 pKa = 4.49SIAKK141 pKa = 9.17FFKK144 pKa = 10.98VPVTRR149 pKa = 11.84VKK151 pKa = 10.72RR152 pKa = 11.84SGKK155 pKa = 9.52LVPGRR160 pKa = 11.84LLKK163 pKa = 10.82FKK165 pKa = 11.24ANVFSHH171 pKa = 5.52KK172 pKa = 10.17RR173 pKa = 11.84GWATGPLLVDD183 pKa = 4.25AKK185 pKa = 10.56GKK187 pKa = 10.38SIQDD191 pKa = 3.18PRR193 pKa = 11.84TASRR197 pKa = 11.84DD198 pKa = 3.81YY199 pKa = 11.13PGLNYY204 pKa = 10.09QKK206 pKa = 9.93YY207 pKa = 9.78CSSFCVKK214 pKa = 10.35NRR216 pKa = 11.84GIKK219 pKa = 9.79VGHH222 pKa = 5.4THH224 pKa = 6.57PKK226 pKa = 9.06VVKK229 pKa = 9.02KK230 pKa = 9.01TRR232 pKa = 3.2

Molecular weight: 26.37 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

203

0

203

62473

65

5688

307.7

34.55

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.327 ± 0.261

1.353 ± 0.121

5.729 ± 0.145

6.111 ± 0.406

4.139 ± 0.134

7.11 ± 0.603

1.881 ± 0.072

6.707 ± 0.208

7.672 ± 0.536

7.238 ± 0.275

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.601 ± 0.175

6.259 ± 0.239

4.039 ± 0.212

2.969 ± 0.102

3.906 ± 0.253

7.672 ± 0.462

7.541 ± 0.495

6.084 ± 0.129

1.111 ± 0.076

4.551 ± 0.189
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski