Wuhan horsefly Virus 3
Average proteome isoelectric point is 9.19
Get precalculated fractions of proteins
Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
All
Note: above files contain also dissociation constants (pKa)
Virtual 2D-PAGE plot for 1 proteins (isoelectric point calculated using IPC2_protein)
Get csv file with sequences according to given criteria:
* You can choose from 21 different methods for calculating isoelectric point
Summary statistics related to proteome-wise predictions
Protein with the lowest isoelectric point:
>tr|A0A1L3KIE1|A0A1L3KIE1_9VIRU RNA-dependent RNA polymerase OS=Wuhan horsefly Virus 3 OX=1923704 PE=4 SV=1
MM1 pKa = 7.36 TVTSVPVVAQVRR13 pKa = 11.84 IPTLRR18 pKa = 11.84 LAAAVLQRR26 pKa = 11.84 SPVLRR31 pKa = 11.84 KK32 pKa = 9.81 GSLRR36 pKa = 11.84 EE37 pKa = 3.62 SLLRR41 pKa = 11.84 LRR43 pKa = 11.84 SLSLKK48 pKa = 10.63 AEE50 pKa = 4.06 EE51 pKa = 4.3 RR52 pKa = 11.84 LDD54 pKa = 4.25 PIEE57 pKa = 4.16 RR58 pKa = 11.84 KK59 pKa = 9.36 FRR61 pKa = 11.84 EE62 pKa = 3.99 EE63 pKa = 3.47 LLRR66 pKa = 11.84 WVDD69 pKa = 3.02 AALYY73 pKa = 9.01 MSLPMYY79 pKa = 10.54 NRR81 pKa = 11.84 TISGSHH87 pKa = 5.13 QVEE90 pKa = 4.53 QYY92 pKa = 11.6 LLALWKK98 pKa = 10.2 LLHH101 pKa = 5.89 YY102 pKa = 10.0 VYY104 pKa = 10.64 KK105 pKa = 10.93 NSIPDD110 pKa = 3.42 VVKK113 pKa = 9.64 TLKK116 pKa = 10.81 DD117 pKa = 3.27 LFFRR121 pKa = 11.84 YY122 pKa = 9.81 LDD124 pKa = 4.34 AGLQSDD130 pKa = 3.84 RR131 pKa = 11.84 EE132 pKa = 3.94 FRR134 pKa = 11.84 RR135 pKa = 11.84 RR136 pKa = 11.84 RR137 pKa = 11.84 FTYY140 pKa = 9.52 LGKK143 pKa = 10.11 RR144 pKa = 11.84 HH145 pKa = 5.87 PLKK148 pKa = 10.88 GFFAIAVKK156 pKa = 10.7 GLTRR160 pKa = 11.84 EE161 pKa = 4.0 SARR164 pKa = 11.84 TIGLAGRR171 pKa = 11.84 CIPSLPLSKK180 pKa = 10.19 EE181 pKa = 3.82 RR182 pKa = 11.84 RR183 pKa = 11.84 LEE185 pKa = 3.89 EE186 pKa = 3.81 YY187 pKa = 11.12 LNLKK191 pKa = 9.5 EE192 pKa = 5.11 RR193 pKa = 11.84 LTTPMPTIPACRR205 pKa = 11.84 GCGHH209 pKa = 7.89 LPPEE213 pKa = 4.94 HH214 pKa = 6.99 PDD216 pKa = 2.91 KK217 pKa = 11.06 RR218 pKa = 11.84 LAAGPGCQRR227 pKa = 11.84 LSRR230 pKa = 11.84 DD231 pKa = 3.79 HH232 pKa = 7.55 IVEE235 pKa = 4.17 SVIKK239 pKa = 9.74 FAEE242 pKa = 4.34 VFARR246 pKa = 11.84 PVKK249 pKa = 10.1 HH250 pKa = 6.53 LPPMSYY256 pKa = 9.85 PADD259 pKa = 3.33 NMVYY263 pKa = 9.99 IPGPLHH269 pKa = 6.78 HH270 pKa = 7.2 GEE272 pKa = 4.03 TRR274 pKa = 11.84 PWLMGVTKK282 pKa = 9.76 PAVEE286 pKa = 5.1 AISDD290 pKa = 3.71 AFDD293 pKa = 5.34 SFDD296 pKa = 3.23 EE297 pKa = 4.26 WKK299 pKa = 10.62 EE300 pKa = 3.81 AVNSPKK306 pKa = 10.46 LPYY309 pKa = 10.07 QLGIWSVHH317 pKa = 6.01 PEE319 pKa = 4.2 AIEE322 pKa = 4.09 NPPEE326 pKa = 4.52 RR327 pKa = 11.84 DD328 pKa = 3.1 PAVGLTRR335 pKa = 11.84 VISEE339 pKa = 4.27 GEE341 pKa = 4.0 SLKK344 pKa = 9.79 TPKK347 pKa = 9.98 RR348 pKa = 11.84 RR349 pKa = 11.84 ANVWYY354 pKa = 9.58 DD355 pKa = 3.4 RR356 pKa = 11.84 KK357 pKa = 10.64 DD358 pKa = 3.31 LRR360 pKa = 11.84 VWYY363 pKa = 9.09 SEE365 pKa = 3.66 RR366 pKa = 11.84 HH367 pKa = 5.24 APSVLHH373 pKa = 6.55 PKK375 pKa = 10.47 DD376 pKa = 3.69 PEE378 pKa = 3.73 AEE380 pKa = 3.9 RR381 pKa = 11.84 RR382 pKa = 11.84 DD383 pKa = 3.68 DD384 pKa = 5.06 HH385 pKa = 7.43 RR386 pKa = 11.84 ILPPGYY392 pKa = 10.05 GLRR395 pKa = 11.84 ALKK398 pKa = 10.09 RR399 pKa = 11.84 SPIAPILNDD408 pKa = 3.29 VVLSGEE414 pKa = 4.29 DD415 pKa = 3.14 QCLVPVHH422 pKa = 6.32 KK423 pKa = 10.92 VLFIPEE429 pKa = 3.97 AGAKK433 pKa = 9.61 VRR435 pKa = 11.84 VATVPSVVSLQTAARR450 pKa = 11.84 QINGIVLRR458 pKa = 11.84 ALKK461 pKa = 10.1 HH462 pKa = 6.15 CPTFHH467 pKa = 7.48 LGLKK471 pKa = 9.64 NSKK474 pKa = 9.89 CFSSKK479 pKa = 8.83 TFAMPDD485 pKa = 3.14 GAKK488 pKa = 10.03 FYY490 pKa = 11.15 SVDD493 pKa = 3.67 LSAASDD499 pKa = 3.63 RR500 pKa = 11.84 LSQPLSLSVLWPFIRR515 pKa = 11.84 EE516 pKa = 4.0 AEE518 pKa = 4.25 KK519 pKa = 10.95 AGLEE523 pKa = 4.11 NAFEE527 pKa = 4.37 VARR530 pKa = 11.84 LSCGPQRR537 pKa = 11.84 IILEE541 pKa = 4.4 DD542 pKa = 3.99 PEE544 pKa = 4.71 VMEE547 pKa = 5.51 LLADD551 pKa = 4.23 PKK553 pKa = 11.07 YY554 pKa = 10.38 SAHH557 pKa = 6.63 LPFFEE562 pKa = 4.57 TEE564 pKa = 3.74 AGLLMGTPLAWPALSLLHH582 pKa = 6.84 LFAALEE588 pKa = 4.12 AGIDD592 pKa = 3.25 IHH594 pKa = 8.03 RR595 pKa = 11.84 VFIVGDD601 pKa = 3.88 DD602 pKa = 3.63 GGLIATAPEE611 pKa = 3.86 YY612 pKa = 10.12 QKK614 pKa = 10.88 YY615 pKa = 7.54 YY616 pKa = 10.9 HH617 pKa = 7.02 IMTNILGLRR626 pKa = 11.84 VNRR629 pKa = 11.84 EE630 pKa = 3.96 KK631 pKa = 9.92 THH633 pKa = 6.36 EE634 pKa = 4.16 SPMMGVVAQKK644 pKa = 10.4 VLKK647 pKa = 10.03 IRR649 pKa = 11.84 PAPCPHH655 pKa = 7.01 AGTPRR660 pKa = 11.84 GKK662 pKa = 10.6 LGIGPLTVWDD672 pKa = 5.02 FVRR675 pKa = 11.84 HH676 pKa = 5.17 EE677 pKa = 4.78 LNLNPNEE684 pKa = 4.2 SPVYY688 pKa = 7.88 WGKK691 pKa = 10.43 VEE693 pKa = 5.32 LDD695 pKa = 3.29 QSHH698 pKa = 7.05 CYY700 pKa = 10.02 VPAALTARR708 pKa = 11.84 SRR710 pKa = 11.84 RR711 pKa = 11.84 RR712 pKa = 11.84 RR713 pKa = 11.84 DD714 pKa = 3.01 PHH716 pKa = 7.64 APWNPPEE723 pKa = 4.1 WSDD726 pKa = 3.34 VARR729 pKa = 11.84 WKK731 pKa = 9.49 RR732 pKa = 11.84 WRR734 pKa = 11.84 RR735 pKa = 11.84 EE736 pKa = 3.93 RR737 pKa = 11.84 LPKK740 pKa = 10.2 ALRR743 pKa = 11.84 LVYY746 pKa = 9.91 PSLVSQSRR754 pKa = 11.84 YY755 pKa = 9.14 RR756 pKa = 11.84 GLRR759 pKa = 11.84 MEE761 pKa = 4.88 APAILGGCGPLTEE774 pKa = 4.39 GAVRR778 pKa = 11.84 KK779 pKa = 9.91 GLTPVQRR786 pKa = 11.84 AGAYY790 pKa = 9.73 AIARR794 pKa = 11.84 EE795 pKa = 4.13 IMHH798 pKa = 6.57 GTRR801 pKa = 11.84 KK802 pKa = 10.19 DD803 pKa = 3.36 LSIDD807 pKa = 3.39 VGPDD811 pKa = 3.0 LTRR814 pKa = 11.84 TIPRR818 pKa = 11.84 AVILAANEE826 pKa = 4.04 VFNEE830 pKa = 4.34 LPRR833 pKa = 11.84 SEE835 pKa = 4.17 TRR837 pKa = 11.84 GTGLPKK843 pKa = 10.12 EE844 pKa = 3.99 AALRR848 pKa = 11.84 SLTSFFVRR856 pKa = 11.84 VAWEE860 pKa = 4.23 GGFRR864 pKa = 11.84 DD865 pKa = 3.55 ANSYY869 pKa = 10.43 LGRR872 pKa = 11.84 SLGHH876 pKa = 5.46 RR877 pKa = 11.84 VVRR880 pKa = 11.84 HH881 pKa = 5.69 PGRR884 pKa = 11.84 LLEE887 pKa = 4.32 AKK889 pKa = 10.16 GRR891 pKa = 11.84 IFLRR895 pKa = 11.84 SRR897 pKa = 11.84 GKK899 pKa = 10.14 RR900 pKa = 11.84 AVPKK904 pKa = 10.09 PLTVVQAFKK913 pKa = 10.9 RR914 pKa = 11.84 LPKK917 pKa = 10.2 PVDD920 pKa = 3.41 VSPGVLKK927 pKa = 10.77 GLNRR931 pKa = 11.84 LIHH934 pKa = 6.99 DD935 pKa = 4.86 LDD937 pKa = 4.74 LGGRR941 pKa = 11.84 QRR943 pKa = 11.84 KK944 pKa = 8.64 RR945 pKa = 11.84 RR946 pKa = 11.84 LDD948 pKa = 3.6 YY949 pKa = 11.04 VLSAGRR955 pKa = 11.84 NDD957 pKa = 3.84 DD958 pKa = 4.13 AEE960 pKa = 4.67 EE961 pKa = 4.67 GTSSSSVQVPEE972 pKa = 4.83 AMSSLLNRR980 pKa = 11.84 LRR982 pKa = 11.84 HH983 pKa = 5.11 GWGKK987 pKa = 10.08 VWGQIQSLGSGGKK1000 pKa = 10.18 GNLTSTHH1007 pKa = 6.46 HH1008 pKa = 5.81 EE1009 pKa = 3.97 AA1010 pKa = 5.0
Molecular weight: 113.17 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 9.192
IPC2_protein 9.253
IPC_protein 9.341
Toseland 10.058
ProMoST 9.736
Dawson 10.233
Bjellqvist 9.926
Wikipedia 10.409
Rodwell 10.555
Grimsley 10.306
Solomon 10.262
Lehninger 10.233
Nozaki 10.072
DTASelect 9.897
Thurlkill 10.101
EMBOSS 10.452
Sillero 10.16
Patrickios 10.058
IPC_peptide 10.277
IPC2_peptide 8.639
IPC2.peptide.svr19 8.255
Protein with the highest isoelectric point:
>tr|A0A1L3KIE1|A0A1L3KIE1_9VIRU RNA-dependent RNA polymerase OS=Wuhan horsefly Virus 3 OX=1923704 PE=4 SV=1
MM1 pKa = 7.36 TVTSVPVVAQVRR13 pKa = 11.84 IPTLRR18 pKa = 11.84 LAAAVLQRR26 pKa = 11.84 SPVLRR31 pKa = 11.84 KK32 pKa = 9.81 GSLRR36 pKa = 11.84 EE37 pKa = 3.62 SLLRR41 pKa = 11.84 LRR43 pKa = 11.84 SLSLKK48 pKa = 10.63 AEE50 pKa = 4.06 EE51 pKa = 4.3 RR52 pKa = 11.84 LDD54 pKa = 4.25 PIEE57 pKa = 4.16 RR58 pKa = 11.84 KK59 pKa = 9.36 FRR61 pKa = 11.84 EE62 pKa = 3.99 EE63 pKa = 3.47 LLRR66 pKa = 11.84 WVDD69 pKa = 3.02 AALYY73 pKa = 9.01 MSLPMYY79 pKa = 10.54 NRR81 pKa = 11.84 TISGSHH87 pKa = 5.13 QVEE90 pKa = 4.53 QYY92 pKa = 11.6 LLALWKK98 pKa = 10.2 LLHH101 pKa = 5.89 YY102 pKa = 10.0 VYY104 pKa = 10.64 KK105 pKa = 10.93 NSIPDD110 pKa = 3.42 VVKK113 pKa = 9.64 TLKK116 pKa = 10.81 DD117 pKa = 3.27 LFFRR121 pKa = 11.84 YY122 pKa = 9.81 LDD124 pKa = 4.34 AGLQSDD130 pKa = 3.84 RR131 pKa = 11.84 EE132 pKa = 3.94 FRR134 pKa = 11.84 RR135 pKa = 11.84 RR136 pKa = 11.84 RR137 pKa = 11.84 FTYY140 pKa = 9.52 LGKK143 pKa = 10.11 RR144 pKa = 11.84 HH145 pKa = 5.87 PLKK148 pKa = 10.88 GFFAIAVKK156 pKa = 10.7 GLTRR160 pKa = 11.84 EE161 pKa = 4.0 SARR164 pKa = 11.84 TIGLAGRR171 pKa = 11.84 CIPSLPLSKK180 pKa = 10.19 EE181 pKa = 3.82 RR182 pKa = 11.84 RR183 pKa = 11.84 LEE185 pKa = 3.89 EE186 pKa = 3.81 YY187 pKa = 11.12 LNLKK191 pKa = 9.5 EE192 pKa = 5.11 RR193 pKa = 11.84 LTTPMPTIPACRR205 pKa = 11.84 GCGHH209 pKa = 7.89 LPPEE213 pKa = 4.94 HH214 pKa = 6.99 PDD216 pKa = 2.91 KK217 pKa = 11.06 RR218 pKa = 11.84 LAAGPGCQRR227 pKa = 11.84 LSRR230 pKa = 11.84 DD231 pKa = 3.79 HH232 pKa = 7.55 IVEE235 pKa = 4.17 SVIKK239 pKa = 9.74 FAEE242 pKa = 4.34 VFARR246 pKa = 11.84 PVKK249 pKa = 10.1 HH250 pKa = 6.53 LPPMSYY256 pKa = 9.85 PADD259 pKa = 3.33 NMVYY263 pKa = 9.99 IPGPLHH269 pKa = 6.78 HH270 pKa = 7.2 GEE272 pKa = 4.03 TRR274 pKa = 11.84 PWLMGVTKK282 pKa = 9.76 PAVEE286 pKa = 5.1 AISDD290 pKa = 3.71 AFDD293 pKa = 5.34 SFDD296 pKa = 3.23 EE297 pKa = 4.26 WKK299 pKa = 10.62 EE300 pKa = 3.81 AVNSPKK306 pKa = 10.46 LPYY309 pKa = 10.07 QLGIWSVHH317 pKa = 6.01 PEE319 pKa = 4.2 AIEE322 pKa = 4.09 NPPEE326 pKa = 4.52 RR327 pKa = 11.84 DD328 pKa = 3.1 PAVGLTRR335 pKa = 11.84 VISEE339 pKa = 4.27 GEE341 pKa = 4.0 SLKK344 pKa = 9.79 TPKK347 pKa = 9.98 RR348 pKa = 11.84 RR349 pKa = 11.84 ANVWYY354 pKa = 9.58 DD355 pKa = 3.4 RR356 pKa = 11.84 KK357 pKa = 10.64 DD358 pKa = 3.31 LRR360 pKa = 11.84 VWYY363 pKa = 9.09 SEE365 pKa = 3.66 RR366 pKa = 11.84 HH367 pKa = 5.24 APSVLHH373 pKa = 6.55 PKK375 pKa = 10.47 DD376 pKa = 3.69 PEE378 pKa = 3.73 AEE380 pKa = 3.9 RR381 pKa = 11.84 RR382 pKa = 11.84 DD383 pKa = 3.68 DD384 pKa = 5.06 HH385 pKa = 7.43 RR386 pKa = 11.84 ILPPGYY392 pKa = 10.05 GLRR395 pKa = 11.84 ALKK398 pKa = 10.09 RR399 pKa = 11.84 SPIAPILNDD408 pKa = 3.29 VVLSGEE414 pKa = 4.29 DD415 pKa = 3.14 QCLVPVHH422 pKa = 6.32 KK423 pKa = 10.92 VLFIPEE429 pKa = 3.97 AGAKK433 pKa = 9.61 VRR435 pKa = 11.84 VATVPSVVSLQTAARR450 pKa = 11.84 QINGIVLRR458 pKa = 11.84 ALKK461 pKa = 10.1 HH462 pKa = 6.15 CPTFHH467 pKa = 7.48 LGLKK471 pKa = 9.64 NSKK474 pKa = 9.89 CFSSKK479 pKa = 8.83 TFAMPDD485 pKa = 3.14 GAKK488 pKa = 10.03 FYY490 pKa = 11.15 SVDD493 pKa = 3.67 LSAASDD499 pKa = 3.63 RR500 pKa = 11.84 LSQPLSLSVLWPFIRR515 pKa = 11.84 EE516 pKa = 4.0 AEE518 pKa = 4.25 KK519 pKa = 10.95 AGLEE523 pKa = 4.11 NAFEE527 pKa = 4.37 VARR530 pKa = 11.84 LSCGPQRR537 pKa = 11.84 IILEE541 pKa = 4.4 DD542 pKa = 3.99 PEE544 pKa = 4.71 VMEE547 pKa = 5.51 LLADD551 pKa = 4.23 PKK553 pKa = 11.07 YY554 pKa = 10.38 SAHH557 pKa = 6.63 LPFFEE562 pKa = 4.57 TEE564 pKa = 3.74 AGLLMGTPLAWPALSLLHH582 pKa = 6.84 LFAALEE588 pKa = 4.12 AGIDD592 pKa = 3.25 IHH594 pKa = 8.03 RR595 pKa = 11.84 VFIVGDD601 pKa = 3.88 DD602 pKa = 3.63 GGLIATAPEE611 pKa = 3.86 YY612 pKa = 10.12 QKK614 pKa = 10.88 YY615 pKa = 7.54 YY616 pKa = 10.9 HH617 pKa = 7.02 IMTNILGLRR626 pKa = 11.84 VNRR629 pKa = 11.84 EE630 pKa = 3.96 KK631 pKa = 9.92 THH633 pKa = 6.36 EE634 pKa = 4.16 SPMMGVVAQKK644 pKa = 10.4 VLKK647 pKa = 10.03 IRR649 pKa = 11.84 PAPCPHH655 pKa = 7.01 AGTPRR660 pKa = 11.84 GKK662 pKa = 10.6 LGIGPLTVWDD672 pKa = 5.02 FVRR675 pKa = 11.84 HH676 pKa = 5.17 EE677 pKa = 4.78 LNLNPNEE684 pKa = 4.2 SPVYY688 pKa = 7.88 WGKK691 pKa = 10.43 VEE693 pKa = 5.32 LDD695 pKa = 3.29 QSHH698 pKa = 7.05 CYY700 pKa = 10.02 VPAALTARR708 pKa = 11.84 SRR710 pKa = 11.84 RR711 pKa = 11.84 RR712 pKa = 11.84 RR713 pKa = 11.84 DD714 pKa = 3.01 PHH716 pKa = 7.64 APWNPPEE723 pKa = 4.1 WSDD726 pKa = 3.34 VARR729 pKa = 11.84 WKK731 pKa = 9.49 RR732 pKa = 11.84 WRR734 pKa = 11.84 RR735 pKa = 11.84 EE736 pKa = 3.93 RR737 pKa = 11.84 LPKK740 pKa = 10.2 ALRR743 pKa = 11.84 LVYY746 pKa = 9.91 PSLVSQSRR754 pKa = 11.84 YY755 pKa = 9.14 RR756 pKa = 11.84 GLRR759 pKa = 11.84 MEE761 pKa = 4.88 APAILGGCGPLTEE774 pKa = 4.39 GAVRR778 pKa = 11.84 KK779 pKa = 9.91 GLTPVQRR786 pKa = 11.84 AGAYY790 pKa = 9.73 AIARR794 pKa = 11.84 EE795 pKa = 4.13 IMHH798 pKa = 6.57 GTRR801 pKa = 11.84 KK802 pKa = 10.19 DD803 pKa = 3.36 LSIDD807 pKa = 3.39 VGPDD811 pKa = 3.0 LTRR814 pKa = 11.84 TIPRR818 pKa = 11.84 AVILAANEE826 pKa = 4.04 VFNEE830 pKa = 4.34 LPRR833 pKa = 11.84 SEE835 pKa = 4.17 TRR837 pKa = 11.84 GTGLPKK843 pKa = 10.12 EE844 pKa = 3.99 AALRR848 pKa = 11.84 SLTSFFVRR856 pKa = 11.84 VAWEE860 pKa = 4.23 GGFRR864 pKa = 11.84 DD865 pKa = 3.55 ANSYY869 pKa = 10.43 LGRR872 pKa = 11.84 SLGHH876 pKa = 5.46 RR877 pKa = 11.84 VVRR880 pKa = 11.84 HH881 pKa = 5.69 PGRR884 pKa = 11.84 LLEE887 pKa = 4.32 AKK889 pKa = 10.16 GRR891 pKa = 11.84 IFLRR895 pKa = 11.84 SRR897 pKa = 11.84 GKK899 pKa = 10.14 RR900 pKa = 11.84 AVPKK904 pKa = 10.09 PLTVVQAFKK913 pKa = 10.9 RR914 pKa = 11.84 LPKK917 pKa = 10.2 PVDD920 pKa = 3.41 VSPGVLKK927 pKa = 10.77 GLNRR931 pKa = 11.84 LIHH934 pKa = 6.99 DD935 pKa = 4.86 LDD937 pKa = 4.74 LGGRR941 pKa = 11.84 QRR943 pKa = 11.84 KK944 pKa = 8.64 RR945 pKa = 11.84 RR946 pKa = 11.84 LDD948 pKa = 3.6 YY949 pKa = 11.04 VLSAGRR955 pKa = 11.84 NDD957 pKa = 3.84 DD958 pKa = 4.13 AEE960 pKa = 4.67 EE961 pKa = 4.67 GTSSSSVQVPEE972 pKa = 4.83 AMSSLLNRR980 pKa = 11.84 LRR982 pKa = 11.84 HH983 pKa = 5.11 GWGKK987 pKa = 10.08 VWGQIQSLGSGGKK1000 pKa = 10.18 GNLTSTHH1007 pKa = 6.46 HH1008 pKa = 5.81 EE1009 pKa = 3.97 AA1010 pKa = 5.0
Molecular weight: 113.17 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 9.192
IPC2_protein 9.253
IPC_protein 9.341
Toseland 10.058
ProMoST 9.736
Dawson 10.233
Bjellqvist 9.926
Wikipedia 10.409
Rodwell 10.555
Grimsley 10.306
Solomon 10.262
Lehninger 10.233
Nozaki 10.072
DTASelect 9.897
Thurlkill 10.101
EMBOSS 10.452
Sillero 10.16
Patrickios 10.058
IPC_peptide 10.277
IPC2_peptide 8.639
IPC2.peptide.svr19 8.255
Peptides (in silico digests for buttom-up proteomics)
Below you can find
in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.
Try ESI
ChTry ESI
ArgC ESI
LysN ESI
TryLysC ESI
Try MALDI
ChTry MALDI
ArgC MALDI
LysN MALDI
TryLysC MALDI
Try LTQ
ChTry LTQ
ArgC LTQ
LysN LTQ
TryLysC LTQ
Try MSlow
ChTry MSlow
ArgC MSlow
LysN MSlow
TryLysC MSlow
Try MShigh
ChTry MShigh
ArgC MShigh
LysN MShigh
TryLysC MShigh
General Statistics
Number of major isoforms
Number of additional isoforms
Number of all proteins
Number of amino acids
Min. Seq. Length
Max. Seq. Length
Avg. Seq. Length
Avg. Mol. Weight
1
0
1
1010
1010
1010
1010.0
113.17
Amino acid frequency
Ala
Cys
Asp
Glu
Phe
Gly
His
Ile
Lys
Leu
8.317 ± 0.0
1.089 ± 0.0
4.158 ± 0.0
6.04 ± 0.0
2.871 ± 0.0
7.03 ± 0.0
3.168 ± 0.0
4.059 ± 0.0
5.149 ± 0.0
11.98 ± 0.0
Met
Asn
Gln
Pro
Arg
Ser
Thr
Val
Trp
Tyr
1.584 ± 0.0
2.376 ± 0.0
8.02 ± 0.0
2.178 ± 0.0
9.703 ± 0.0
6.634 ± 0.0
3.861 ± 0.0
7.426 ± 0.0
1.782 ± 0.0
2.574 ± 0.0
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level
Most of the basic statistics you can see at this page can be downloaded from this CSV file
For dipeptide frequency statistics click here