Kwoniella heveanensis BCC8398
Average proteome isoelectric point is 6.43
Get precalculated fractions of proteins
Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
All
Note: above files contain also dissociation constants (pKa)
Virtual 2D-PAGE plot for 7924 proteins (isoelectric point calculated using IPC2_protein)
Get csv file with sequences according to given criteria:
* You can choose from 21 different methods for calculating isoelectric point
Summary statistics related to proteome-wise predictions
Protein with the lowest isoelectric point:
>tr|A0A1B9GJ44|A0A1B9GJ44_9TREE Cysteine proteinase 1 mitochondrial OS=Kwoniella heveanensis BCC8398 OX=1296120 GN=I316_07361 PE=3 SV=1
MM1 pKa = 7.81 LYY3 pKa = 10.55 NRR5 pKa = 11.84 LFSLLPLLPLVFSAPLPLPLLGLDD29 pKa = 4.73 DD30 pKa = 5.08 LAATDD35 pKa = 5.65 GILDD39 pKa = 4.26 PLLNTQDD46 pKa = 3.77 FAVPPPSSSDD56 pKa = 3.27 PSGPALGPGGLLSGLLGNDD75 pKa = 3.21 NDD77 pKa = 3.9 QSEE80 pKa = 4.61 GLLGSLVDD88 pKa = 3.88 TVTDD92 pKa = 3.06 ITGPLNISLGLNTSILGTDD111 pKa = 3.87 LDD113 pKa = 4.56 LGLNIQLGDD122 pKa = 4.27 DD123 pKa = 3.9 EE124 pKa = 5.3 EE125 pKa = 5.28 LICGSVNGVWDD136 pKa = 3.68 GTSYY140 pKa = 11.49 DD141 pKa = 4.11 LRR143 pKa = 11.84 CVCWSVEE150 pKa = 3.8 KK151 pKa = 10.98 GIVIDD156 pKa = 4.06 AQVGADD162 pKa = 2.97 IGLGEE167 pKa = 4.87 RR168 pKa = 11.84 EE169 pKa = 4.17 GLDD172 pKa = 3.0 AFLRR176 pKa = 11.84 AQIQFGGHH184 pKa = 5.46 KK185 pKa = 9.67 FAYY188 pKa = 8.51 PAYY191 pKa = 10.21 AEE193 pKa = 4.29 PTCDD197 pKa = 3.05 GSGGFNCPGGRR208 pKa = 11.84 QANGKK213 pKa = 9.81 CSAFLAAKK221 pKa = 8.72 PRR223 pKa = 11.84 PRR225 pKa = 11.84 PIPAADD231 pKa = 3.9 AGSPAPTPTPAPAAAAIPPATDD253 pKa = 3.46 LQINSVPPTTISASATTTTAAAAATVNSPDD283 pKa = 3.57 APQAQAQDD291 pKa = 3.62 EE292 pKa = 4.83 TFGIQAVPAVAAAVTQFGTTTTTSMSTEE320 pKa = 4.3 TIVLPATVFVEE331 pKa = 4.73 MITTTEE337 pKa = 3.61 MSTIYY342 pKa = 9.97 ATVTQTEE349 pKa = 4.54 VSTSISTATVTSTQTSTQTQWTTATSTVSTCSTTAEE385 pKa = 4.02 DD386 pKa = 3.51 EE387 pKa = 4.41 QINVDD392 pKa = 4.19 SVAQPTTSVTGYY404 pKa = 8.5 TPASSTLVTSTSSSSATPAPEE425 pKa = 3.73 VTIAATPAPATGPATSGSTGGVPAPDD451 pKa = 3.9 PTSTPTPAVDD461 pKa = 4.92 NGDD464 pKa = 3.94 GDD466 pKa = 5.55 DD467 pKa = 5.46 DD468 pKa = 4.36 DD469 pKa = 4.83 TFSGPRR475 pKa = 11.84 VIDD478 pKa = 3.45 LAKK481 pKa = 9.39 PQSHH485 pKa = 6.78 GSTTCPEE492 pKa = 3.89 GQAWGSTMCCRR503 pKa = 11.84 TDD505 pKa = 3.32 QVEE508 pKa = 3.97 VDD510 pKa = 4.63 GEE512 pKa = 4.71 CKK514 pKa = 10.53 CHH516 pKa = 7.38 DD517 pKa = 3.8 GFEE520 pKa = 4.87 NIVDD524 pKa = 3.62 VCLRR528 pKa = 11.84 LCIGDD533 pKa = 3.86 RR534 pKa = 11.84 LPSGEE539 pKa = 4.45 CSILGLGLDD548 pKa = 4.24 LGVGLGGLEE557 pKa = 4.02 LL558 pKa = 4.9
Molecular weight: 56.51 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 3.704
IPC2_protein 3.681
IPC_protein 3.719
Toseland 3.49
ProMoST 3.884
Dawson 3.719
Bjellqvist 3.872
Wikipedia 3.656
Rodwell 3.541
Grimsley 3.401
Solomon 3.706
Lehninger 3.668
Nozaki 3.821
DTASelect 4.088
Thurlkill 3.541
EMBOSS 3.668
Sillero 3.846
Patrickios 0.846
IPC_peptide 3.706
IPC2_peptide 3.821
IPC2.peptide.svr19 3.743
Protein with the highest isoelectric point:
>tr|A0A1B9GKX1|A0A1B9GKX1_9TREE BRCT domain-containing protein OS=Kwoniella heveanensis BCC8398 OX=1296120 GN=I316_06790 PE=4 SV=1
MM1 pKa = 7.56 PASPQICEE9 pKa = 3.94 NCGLPRR15 pKa = 11.84 AFPPSPRR22 pKa = 11.84 DD23 pKa = 3.28 LPTMFEE29 pKa = 4.22 EE30 pKa = 4.53 DD31 pKa = 3.6 FEE33 pKa = 5.16 RR34 pKa = 11.84 CFICEE39 pKa = 4.09 KK40 pKa = 10.24 ACKK43 pKa = 9.98 GLYY46 pKa = 9.87 CSSEE50 pKa = 3.78 CRR52 pKa = 11.84 LRR54 pKa = 11.84 DD55 pKa = 3.24 QGTPSPAVPAAKK67 pKa = 9.45 MGPVKK72 pKa = 9.79 ITSQLPASLSPLVRR86 pKa = 11.84 PAHH89 pKa = 5.9 HH90 pKa = 7.59 PGRR93 pKa = 11.84 SPRR96 pKa = 11.84 VFAQNRR102 pKa = 11.84 ASSSISSGSSSVSSSPLQSPQTNPSEE128 pKa = 4.09 ADD130 pKa = 3.44 SPKK133 pKa = 10.49 KK134 pKa = 9.97 DD135 pKa = 3.64 TFDD138 pKa = 4.63 LPPPAYY144 pKa = 8.39 PFKK147 pKa = 11.07 VGGIPTSVPMKK158 pKa = 10.23 IPALIPRR165 pKa = 11.84 AAVAQQPHH173 pKa = 5.98 GQTPGSQGSTIYY185 pKa = 10.23 PAGTSIDD192 pKa = 3.44 TLRR195 pKa = 11.84 FGRR198 pKa = 11.84 KK199 pKa = 8.36 PSVVNNVISPNALIPRR215 pKa = 11.84 CACGLPANHH224 pKa = 7.6 KK225 pKa = 10.21 GRR227 pKa = 11.84 ANSKK231 pKa = 10.36 DD232 pKa = 3.45 RR233 pKa = 11.84 ADD235 pKa = 3.81 LPEE238 pKa = 5.51 SGFSRR243 pKa = 11.84 LSLGPSVVNPPHH255 pKa = 6.9 ASEE258 pKa = 4.41 EE259 pKa = 3.97 PGPRR263 pKa = 11.84 SFRR266 pKa = 11.84 IVSDD270 pKa = 3.41 SAIPPFPGRR279 pKa = 11.84 PVQPSVPTPSRR290 pKa = 11.84 ASIPLSIPQSPQVNPTASLLSRR312 pKa = 11.84 SRR314 pKa = 11.84 SDD316 pKa = 4.84 PIPSSPQVQRR326 pKa = 11.84 RR327 pKa = 11.84 AKK329 pKa = 9.47 PIPAAPAPAPIIATNVITPSHH350 pKa = 7.11 RR351 pKa = 11.84 EE352 pKa = 3.71 TFAVPMSPIVPAQASACRR370 pKa = 11.84 PSRR373 pKa = 11.84 HH374 pKa = 5.64 TPNALEE380 pKa = 4.14 VSMASPRR387 pKa = 11.84 RR388 pKa = 11.84 GRR390 pKa = 11.84 SRR392 pKa = 11.84 EE393 pKa = 3.94 RR394 pKa = 11.84 QEE396 pKa = 3.86 HH397 pKa = 6.45 HH398 pKa = 6.42 VPQMTGNALGGPADD412 pKa = 4.23 RR413 pKa = 11.84 EE414 pKa = 4.23 QAPSRR419 pKa = 11.84 SRR421 pKa = 11.84 NRR423 pKa = 11.84 RR424 pKa = 11.84 DD425 pKa = 2.76 SRR427 pKa = 11.84 RR428 pKa = 11.84 RR429 pKa = 11.84 SDD431 pKa = 2.95 SRR433 pKa = 11.84 EE434 pKa = 3.65 RR435 pKa = 11.84 EE436 pKa = 3.88 RR437 pKa = 11.84 EE438 pKa = 3.78 RR439 pKa = 11.84 EE440 pKa = 3.92 RR441 pKa = 11.84 GRR443 pKa = 11.84 GRR445 pKa = 11.84 AGVVVGDD452 pKa = 4.15 RR453 pKa = 11.84 EE454 pKa = 4.33 RR455 pKa = 11.84 EE456 pKa = 3.91 HH457 pKa = 7.56 SGQRR461 pKa = 11.84 SPRR464 pKa = 11.84 SPLATTNGTVDD475 pKa = 3.99 PPQILPSWSRR485 pKa = 11.84 RR486 pKa = 11.84 ASEE489 pKa = 3.81 ATADD493 pKa = 3.62 MRR495 pKa = 11.84 KK496 pKa = 9.48 LVGDD500 pKa = 4.01 GVVTPVMRR508 pKa = 11.84 RR509 pKa = 11.84 TSSGDD514 pKa = 2.99 KK515 pKa = 10.22 KK516 pKa = 10.95 SPVYY520 pKa = 10.45 EE521 pKa = 3.93 RR522 pKa = 11.84 DD523 pKa = 3.12 EE524 pKa = 4.25 EE525 pKa = 4.0 EE526 pKa = 4.28 RR527 pKa = 11.84 EE528 pKa = 4.08 RR529 pKa = 11.84 KK530 pKa = 9.6 RR531 pKa = 11.84 EE532 pKa = 3.85 EE533 pKa = 3.68 LKK535 pKa = 10.79 RR536 pKa = 11.84 ASKK539 pKa = 10.63 QLGQVFGVAAGG550 pKa = 3.38
Molecular weight: 59.16 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 9.349
IPC2_protein 9.428
IPC_protein 10.233
Toseland 10.76
ProMoST 10.526
Dawson 10.804
Bjellqvist 10.555
Wikipedia 11.038
Rodwell 10.891
Grimsley 10.833
Solomon 10.994
Lehninger 10.965
Nozaki 10.76
DTASelect 10.54
Thurlkill 10.745
EMBOSS 11.169
Sillero 10.76
Patrickios 10.599
IPC_peptide 11.008
IPC2_peptide 9.809
IPC2.peptide.svr19 8.776
Peptides (in silico digests for buttom-up proteomics)
Below you can find
in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.
Try ESI
ChTry ESI
ArgC ESI
LysN ESI
TryLysC ESI
Try MALDI
ChTry MALDI
ArgC MALDI
LysN MALDI
TryLysC MALDI
Try LTQ
ChTry LTQ
ArgC LTQ
LysN LTQ
TryLysC LTQ
Try MSlow
ChTry MSlow
ArgC MSlow
LysN MSlow
TryLysC MSlow
Try MShigh
ChTry MShigh
ArgC MShigh
LysN MShigh
TryLysC MShigh
General Statistics
Number of major isoforms
Number of additional isoforms
Number of all proteins
Number of amino acids
Min. Seq. Length
Max. Seq. Length
Avg. Seq. Length
Avg. Mol. Weight
7924
0
7924
4255186
44
5007
537.0
58.57
Amino acid frequency
Ala
Cys
Asp
Glu
Phe
Gly
His
Ile
Lys
Leu
8.998 ± 0.028
0.937 ± 0.009
5.611 ± 0.019
6.203 ± 0.026
3.188 ± 0.016
7.705 ± 0.026
2.369 ± 0.013
4.544 ± 0.016
4.738 ± 0.022
8.54 ± 0.03
Met
Asn
Gln
Pro
Arg
Ser
Thr
Val
Trp
Tyr
2.019 ± 0.011
3.325 ± 0.014
6.75 ± 0.033
3.849 ± 0.022
6.015 ± 0.023
9.498 ± 0.036
6.046 ± 0.019
5.907 ± 0.018
1.316 ± 0.01
2.442 ± 0.013
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level
Most of the basic statistics you can see at this page can be downloaded from this CSV file
For dipeptide frequency statistics click here