Bogoriella caseilytica

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Actinobacteria; Actinomycetia; Micrococcales; Bogoriellaceae; Bogoriella

Average proteome isoelectric point is 5.98

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2844 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A3N2BEL8|A0A3N2BEL8_9MICO Enterochelin esterase family protein OS=Bogoriella caseilytica OX=56055 GN=EDD31_2091 PE=4 SV=1
MM1 pKa = 7.44AVLIGVLGSMAMAVPVAADD20 pKa = 3.49TALEE24 pKa = 3.96PAIEE28 pKa = 4.75ADD30 pKa = 4.48SADD33 pKa = 3.74ADD35 pKa = 3.8ADD37 pKa = 3.74ADD39 pKa = 3.97ADD41 pKa = 3.74ADD43 pKa = 3.97AAADD47 pKa = 3.61AAAEE51 pKa = 4.12ADD53 pKa = 3.83STEE56 pKa = 4.02AAAEE60 pKa = 4.05EE61 pKa = 4.21DD62 pKa = 4.37TEE64 pKa = 4.5TLSDD68 pKa = 3.62TADD71 pKa = 3.36EE72 pKa = 4.54GTPATSSDD80 pKa = 3.91DD81 pKa = 3.58VSTLAEE87 pKa = 3.87VSPFAEE93 pKa = 4.35PSPVYY98 pKa = 10.21EE99 pKa = 4.01ITGVWLEE106 pKa = 4.04QPEE109 pKa = 4.55VTSRR113 pKa = 11.84GNPVVADD120 pKa = 3.15WRR122 pKa = 11.84INVNDD127 pKa = 3.99GNNPPSNEE135 pKa = 3.78LVDD138 pKa = 4.2NVVATFDD145 pKa = 3.19VGNAVFQTIPDD156 pKa = 3.79LCLTTGVQPASSISADD172 pKa = 3.59GSLLTCNFGTVALGRR187 pKa = 11.84SIALQTPVITEE198 pKa = 4.28GVTGTNVSLSGTSPAGEE215 pKa = 4.11TVEE218 pKa = 5.3LPLIPIQNDD227 pKa = 2.77FRR229 pKa = 11.84MDD231 pKa = 3.14MHH233 pKa = 7.16FGQNTNQRR241 pKa = 11.84EE242 pKa = 4.16WDD244 pKa = 3.79SLSNPTNVNLDD255 pKa = 3.85VQWSLRR261 pKa = 11.84LGKK264 pKa = 10.77GSDD267 pKa = 3.72PGPANQTFRR276 pKa = 11.84LRR278 pKa = 11.84IAPIFPAGSTVEE290 pKa = 4.34VGTHH294 pKa = 6.4IYY296 pKa = 9.35TGVVGCSPFDD306 pKa = 3.75LSNAPGHH313 pKa = 6.81PYY315 pKa = 10.46SSNPPHH321 pKa = 6.65PRR323 pKa = 11.84HH324 pKa = 5.89TNFVDD329 pKa = 3.41SCTLTAVPGEE339 pKa = 4.12PGVFDD344 pKa = 4.03LTLEE348 pKa = 4.64GINYY352 pKa = 10.0SLVNAPTNDD361 pKa = 3.2AGTANSPLPADD372 pKa = 3.55WDD374 pKa = 4.28YY375 pKa = 11.82VASGSLWFQVNAGSNGSLALTMDD398 pKa = 4.43PVTYY402 pKa = 9.18TATTGQTSEE411 pKa = 5.0DD412 pKa = 3.89LGTNNQTTKK421 pKa = 11.17AFTLPGAWSASFRR434 pKa = 11.84RR435 pKa = 11.84SATGSGGTFWDD446 pKa = 3.49DD447 pKa = 3.37SYY449 pKa = 11.78RR450 pKa = 11.84VTPGVTLRR458 pKa = 11.84NEE460 pKa = 3.75ARR462 pKa = 11.84NGYY465 pKa = 10.06SGDD468 pKa = 3.59RR469 pKa = 11.84NVAPTAQYY477 pKa = 10.82GSCLALDD484 pKa = 3.66TRR486 pKa = 11.84YY487 pKa = 10.88VIVDD491 pKa = 3.56RR492 pKa = 11.84DD493 pKa = 3.23FDD495 pKa = 4.23LAVATGFLARR505 pKa = 11.84NDD507 pKa = 3.62WPASAVLEE515 pKa = 4.44YY516 pKa = 10.92YY517 pKa = 10.88VGGSTLLDD525 pKa = 3.87PATGNTAYY533 pKa = 10.87NPDD536 pKa = 3.55QFEE539 pKa = 4.54CDD541 pKa = 3.66SDD543 pKa = 3.84PGGWTTEE550 pKa = 4.05LPADD554 pKa = 4.38LSTIRR559 pKa = 11.84AARR562 pKa = 11.84VTYY565 pKa = 10.27DD566 pKa = 3.48FSSFDD571 pKa = 3.33EE572 pKa = 4.35VGRR575 pKa = 11.84EE576 pKa = 4.09FIDD579 pKa = 3.65LVGWTTVRR587 pKa = 11.84EE588 pKa = 4.05DD589 pKa = 3.49VQPGQDD595 pKa = 2.07IWTFGSRR602 pKa = 11.84LRR604 pKa = 11.84NGGWFGPAQEE614 pKa = 4.57EE615 pKa = 5.39VITPTPDD622 pKa = 2.52ARR624 pKa = 11.84YY625 pKa = 8.07PHH627 pKa = 6.65TDD629 pKa = 2.44GRR631 pKa = 11.84RR632 pKa = 11.84DD633 pKa = 3.2IARR636 pKa = 11.84VISANPAIQKK646 pKa = 9.26SAEE649 pKa = 3.98RR650 pKa = 11.84SVVVPGVPTVFTLRR664 pKa = 11.84YY665 pKa = 8.55SANTGAGIPEE675 pKa = 4.35SVDD678 pKa = 2.96GYY680 pKa = 9.1TVVDD684 pKa = 3.81TLPPLVTYY692 pKa = 9.71EE693 pKa = 4.28VGSSDD698 pKa = 4.18PEE700 pKa = 4.05PTVTTNANNQQVLTWTFDD718 pKa = 3.57NVPTNVQNVLTYY730 pKa = 10.73AAAADD735 pKa = 3.9SSVAPGTPLVNTATASLGGTTSSPARR761 pKa = 11.84ATVTTANNGFTTILKK776 pKa = 9.07TSDD779 pKa = 3.1VEE781 pKa = 4.59FIPNRR786 pKa = 11.84LGDD789 pKa = 4.08GVGSGSWTVTIEE801 pKa = 4.03SRR803 pKa = 11.84DD804 pKa = 3.85PQSQAWTDD812 pKa = 3.68TIDD815 pKa = 3.21ILPYY819 pKa = 10.53NGDD822 pKa = 3.13GRR824 pKa = 11.84GTSFSGTYY832 pKa = 9.37TLGDD836 pKa = 3.27VVLFDD841 pKa = 5.17GGTLYY846 pKa = 9.82YY847 pKa = 10.43TDD849 pKa = 5.36ADD851 pKa = 4.23PATLSDD857 pKa = 4.56DD858 pKa = 4.08PAHH861 pKa = 6.79EE862 pKa = 4.96SNGAPNAPSALWSTEE877 pKa = 3.66RR878 pKa = 11.84PEE880 pKa = 4.12NPTAIRR886 pKa = 11.84VIGGTLATGGSFSFQVPITTDD907 pKa = 3.02GAEE910 pKa = 4.15AQDD913 pKa = 3.61VFVNRR918 pKa = 11.84AQARR922 pKa = 11.84AEE924 pKa = 3.91HH925 pKa = 6.5TEE927 pKa = 3.72LVMRR931 pKa = 11.84TSAALVVTDD940 pKa = 3.55YY941 pKa = 11.32LVEE944 pKa = 4.24KK945 pKa = 10.22SANPEE950 pKa = 3.7SGSTVRR956 pKa = 11.84PGDD959 pKa = 3.58VVEE962 pKa = 4.26YY963 pKa = 9.29TVTVSQMGDD972 pKa = 3.17VPAGAWFSDD981 pKa = 3.68DD982 pKa = 3.71MSDD985 pKa = 4.18VLDD988 pKa = 4.42DD989 pKa = 4.02ADD991 pKa = 3.99YY992 pKa = 11.51NGDD995 pKa = 3.17VTASHH1000 pKa = 6.79GEE1002 pKa = 3.97VLSFEE1007 pKa = 4.28NGILEE1012 pKa = 4.37WEE1014 pKa = 4.6GVVPVGEE1021 pKa = 4.35IATITYY1027 pKa = 10.29SVTVKK1032 pKa = 10.44AAEE1035 pKa = 4.09EE1036 pKa = 3.85LRR1038 pKa = 11.84EE1039 pKa = 4.13GDD1041 pKa = 4.7SNTFLNNQVTSPGCQGACSTEE1062 pKa = 4.02HH1063 pKa = 6.03LVGYY1067 pKa = 9.57YY1068 pKa = 9.96SVSKK1072 pKa = 9.09TAEE1075 pKa = 4.03PAPGEE1080 pKa = 4.19TVRR1083 pKa = 11.84IGDD1086 pKa = 3.87VITYY1090 pKa = 8.78HH1091 pKa = 5.79VQVTQHH1097 pKa = 6.42GEE1099 pKa = 4.1GAVDD1103 pKa = 3.2NAFFIDD1109 pKa = 4.52DD1110 pKa = 4.15LSEE1113 pKa = 4.15VLDD1116 pKa = 3.96DD1117 pKa = 6.57AIWNDD1122 pKa = 3.64DD1123 pKa = 3.32AAATDD1128 pKa = 4.39GEE1130 pKa = 4.57LSFDD1134 pKa = 3.88EE1135 pKa = 6.13PILSWSAPLEE1145 pKa = 4.32VGDD1148 pKa = 4.39VVDD1151 pKa = 3.37VTYY1154 pKa = 11.08SVTVTGEE1161 pKa = 3.49GDD1163 pKa = 3.5YY1164 pKa = 11.05EE1165 pKa = 4.1LRR1167 pKa = 11.84NVVSSVCAEE1176 pKa = 4.62DD1177 pKa = 6.06DD1178 pKa = 4.05PDD1180 pKa = 4.21CLEE1183 pKa = 5.05AICVPAADD1191 pKa = 4.8EE1192 pKa = 5.12NPDD1195 pKa = 3.53CTTEE1199 pKa = 4.58HH1200 pKa = 6.59IVGDD1204 pKa = 3.86YY1205 pKa = 10.63QVTKK1209 pKa = 10.9VSDD1212 pKa = 4.07PEE1214 pKa = 4.14SGSAVEE1220 pKa = 4.34VGDD1223 pKa = 4.0VIDD1226 pKa = 3.76YY1227 pKa = 7.79TVTVSHH1233 pKa = 7.04IGLADD1238 pKa = 3.56VEE1240 pKa = 4.41ASFVDD1245 pKa = 3.97DD1246 pKa = 5.32LSDD1249 pKa = 4.22VLDD1252 pKa = 4.09DD1253 pKa = 6.15AIWNDD1258 pKa = 4.05DD1259 pKa = 3.28VSASAGEE1266 pKa = 4.04FSFEE1270 pKa = 4.67GEE1272 pKa = 4.21TLSWWGALSEE1282 pKa = 4.31GDD1284 pKa = 4.0VVTVTYY1290 pKa = 10.65SVTVTAEE1297 pKa = 3.63GDD1299 pKa = 3.38RR1300 pKa = 11.84YY1301 pKa = 10.78LEE1303 pKa = 4.16NVVTTDD1309 pKa = 3.34GWCVPAEE1316 pKa = 4.39GQDD1319 pKa = 3.57EE1320 pKa = 4.54ACRR1323 pKa = 11.84TVHH1326 pKa = 6.75INGAYY1331 pKa = 8.38TYY1333 pKa = 9.31SKK1335 pKa = 10.66SSEE1338 pKa = 4.31SPSGSLVRR1346 pKa = 11.84PGEE1349 pKa = 4.27VVTYY1353 pKa = 8.17TLEE1356 pKa = 4.12VEE1358 pKa = 4.77HH1359 pKa = 6.94VGTAPVSGAIVTDD1372 pKa = 4.36DD1373 pKa = 4.02LSQVLPYY1380 pKa = 10.94ASWNDD1385 pKa = 3.47DD1386 pKa = 3.39AEE1388 pKa = 4.53ATDD1391 pKa = 3.81GTVVRR1396 pKa = 11.84DD1397 pKa = 3.9GEE1399 pKa = 4.54TLTWTGDD1406 pKa = 3.66LAVGQVVEE1414 pKa = 4.11ITYY1417 pKa = 10.68SVTVGDD1423 pKa = 4.23LEE1425 pKa = 4.59EE1426 pKa = 4.46IAMVNVVTSPDD1437 pKa = 3.21EE1438 pKa = 4.03RR1439 pKa = 11.84AVCVPAADD1447 pKa = 4.25EE1448 pKa = 4.46NADD1451 pKa = 3.8CTTEE1455 pKa = 4.21HH1456 pKa = 6.72YY1457 pKa = 10.78NGAYY1461 pKa = 8.79TFSKK1465 pKa = 9.9TSDD1468 pKa = 3.62PASGSVVEE1476 pKa = 4.47AGEE1479 pKa = 4.34VVTYY1483 pKa = 8.45TVVVEE1488 pKa = 4.53HH1489 pKa = 6.74YY1490 pKa = 8.08GTAGVQDD1497 pKa = 5.23AIVVDD1502 pKa = 4.45DD1503 pKa = 4.0LTGVLAYY1510 pKa = 10.43AEE1512 pKa = 4.4WNDD1515 pKa = 4.28DD1516 pKa = 3.57AQADD1520 pKa = 4.11SGDD1523 pKa = 3.53LAYY1526 pKa = 10.37ADD1528 pKa = 5.01EE1529 pKa = 4.34EE1530 pKa = 4.7LVWSGDD1536 pKa = 3.54LAIGQVVEE1544 pKa = 3.84ITYY1547 pKa = 10.64SVTVGDD1553 pKa = 3.97EE1554 pKa = 4.3PEE1556 pKa = 4.12ATLHH1560 pKa = 6.12NVVTSPDD1567 pKa = 3.45DD1568 pKa = 3.46RR1569 pKa = 11.84AVCVPAADD1577 pKa = 4.28GNAGCATEE1585 pKa = 4.64HH1586 pKa = 5.53TTPPDD1591 pKa = 3.56APGKK1595 pKa = 9.45PPVPGLPSTGALLPWGMGLVALLLIACGGVLTITEE1630 pKa = 3.93QRR1632 pKa = 11.84KK1633 pKa = 7.82AASRR1637 pKa = 11.84ARR1639 pKa = 11.84QQIGTDD1645 pKa = 3.12RR1646 pKa = 11.84FF1647 pKa = 3.63

Molecular weight: 173.21 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A3N2BG53|A0A3N2BG53_9MICO 23S rRNA (Cytidine1920-2'-O)/16S rRNA (Cytidine1409-2'-O)-methyltransferase OS=Bogoriella caseilytica OX=56055 GN=EDD31_2631 PE=4 SV=1
MM1 pKa = 7.3ARR3 pKa = 11.84AARR6 pKa = 11.84GNIVLALLALLALLALLALLALLALLALLALARR39 pKa = 11.84PAGTSRR45 pKa = 11.84LGAATSGPTRR55 pKa = 11.84RR56 pKa = 11.84ATPHH60 pKa = 6.69RR61 pKa = 11.84LPRR64 pKa = 11.84DD65 pKa = 3.37AGGVRR70 pKa = 3.61

Molecular weight: 7.08 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2844

0

2844

992085

30

2576

348.8

37.33

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

13.521 ± 0.061

0.539 ± 0.011

5.789 ± 0.043

6.728 ± 0.051

2.756 ± 0.03

9.151 ± 0.041

2.257 ± 0.024

3.916 ± 0.028

1.493 ± 0.03

10.372 ± 0.057

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.922 ± 0.019

1.78 ± 0.022

5.721 ± 0.04

3.088 ± 0.024

7.372 ± 0.058

5.59 ± 0.029

5.897 ± 0.038

8.62 ± 0.043

1.539 ± 0.019

1.949 ± 0.022
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski