Aureobasidium melanogenum CBS 110374

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Ascomycota; saccharomyceta; Pezizomycotina; leotiomyceta; dothideomyceta; Dothideomycetes; Dothideomycetidae; Dothideales; Saccotheciaceae; Aureobasidium; Aureobasidium melanogenum

Average proteome isoelectric point is 6.44

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 10583 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A074VG94|A0A074VG94_9PEZI Uncharacterized protein OS=Aureobasidium melanogenum CBS 110374 OX=1043003 GN=M437DRAFT_55826 PE=4 SV=1
MM1 pKa = 7.61HH2 pKa = 7.49NFTIQATLVFFTLGTISTVASPADD26 pKa = 3.6MLTALMLPSLLSKK39 pKa = 10.36PDD41 pKa = 3.26VSIQTLCSGAEE52 pKa = 4.19GNTTADD58 pKa = 4.34DD59 pKa = 3.71STTAAKK65 pKa = 10.1IISSGNKK72 pKa = 8.97EE73 pKa = 4.17DD74 pKa = 3.76NQAALNTQPSYY85 pKa = 11.48CPDD88 pKa = 3.33SYY90 pKa = 11.05EE91 pKa = 4.13TMPMCVDD98 pKa = 3.79CGGFTLFYY106 pKa = 10.56YY107 pKa = 10.64KK108 pKa = 10.6EE109 pKa = 3.81LDD111 pKa = 3.99YY112 pKa = 11.67YY113 pKa = 9.78DD114 pKa = 4.07TRR116 pKa = 11.84CKK118 pKa = 10.69GVGDD122 pKa = 3.93NEE124 pKa = 4.16DD125 pKa = 5.23LKK127 pKa = 11.41DD128 pKa = 3.89CSCLEE133 pKa = 3.62RR134 pKa = 11.84RR135 pKa = 11.84YY136 pKa = 10.28QEE138 pKa = 5.44DD139 pKa = 3.91DD140 pKa = 5.21DD141 pKa = 4.55IVCNMFAADD150 pKa = 4.56PDD152 pKa = 3.79IDD154 pKa = 4.67PDD156 pKa = 3.92PEE158 pKa = 3.68ATRR161 pKa = 11.84RR162 pKa = 11.84KK163 pKa = 7.56TVEE166 pKa = 3.91AMIQVPDD173 pKa = 4.52SIIDD177 pKa = 4.53PITGTEE183 pKa = 4.06LNQPHH188 pKa = 6.76IVLDD192 pKa = 4.0DD193 pKa = 4.51DD194 pKa = 4.38FWAATVQEE202 pKa = 4.92IMDD205 pKa = 3.94QEE207 pKa = 4.5DD208 pKa = 3.78KK209 pKa = 11.04EE210 pKa = 4.59QEE212 pKa = 4.16DD213 pKa = 3.76EE214 pKa = 4.41CLPKK218 pKa = 10.76EE219 pKa = 4.48SVV221 pKa = 3.02

Molecular weight: 24.46 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A074VTW3|A0A074VTW3_9PEZI Uncharacterized protein OS=Aureobasidium melanogenum CBS 110374 OX=1043003 GN=M437DRAFT_67501 PE=4 SV=1
MM1 pKa = 7.88PSHH4 pKa = 6.91KK5 pKa = 10.39SFRR8 pKa = 11.84TKK10 pKa = 10.45QKK12 pKa = 9.84LAKK15 pKa = 9.55AQKK18 pKa = 8.59QNRR21 pKa = 11.84PIPQWIRR28 pKa = 11.84LRR30 pKa = 11.84TNNTIRR36 pKa = 11.84YY37 pKa = 5.73NAKK40 pKa = 8.89RR41 pKa = 11.84RR42 pKa = 11.84HH43 pKa = 4.15WRR45 pKa = 11.84KK46 pKa = 7.38TRR48 pKa = 11.84IGII51 pKa = 4.0

Molecular weight: 6.31 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

10583

0

10583

4696349

49

4913

443.8

49.17

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.825 ± 0.022

1.268 ± 0.008

5.803 ± 0.02

6.08 ± 0.02

3.73 ± 0.015

6.478 ± 0.023

2.416 ± 0.011

4.939 ± 0.018

5.074 ± 0.023

8.845 ± 0.025

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.25 ± 0.009

3.867 ± 0.013

5.751 ± 0.025

4.198 ± 0.018

5.766 ± 0.022

8.247 ± 0.035

6.085 ± 0.018

6.075 ± 0.017

1.46 ± 0.008

2.843 ± 0.012
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski