Amino acid dipepetide frequency for Falcovirus A1

Apart from single amino acid frequencies one can also calculate so called amino acid dipeptide frequency.

There is 400 possibilites (441 if we consider Xaa as additional 21st amino acid representing all non-standard or unknown amino acids). Thus, if the dipeptides would be present randomly in proteins each amino acid dipeptide should be present with 0.25% frequency. As it is not the case in the nature, for better visablity all more than expected dipepetides are marked by red, and those which are underrepresented are marked by blue in the table.

All values are presented as per milles (‰), therefore need to be multiplied by 10-3.

For more information see sequence space article on Wikipedia.

AlaCysAspGluPheGlyHisIleLysLeuMetAsnProGlnArgSerThrValTrpTyrXaa
Ala
4.134AlaAla: 4.134 ± 0.0
1.24AlaCys: 1.24 ± 0.0
5.374AlaAsp: 5.374 ± 0.0
4.961AlaGlu: 4.961 ± 0.0
2.894AlaPhe: 2.894 ± 0.0
3.721AlaGly: 3.721 ± 0.0
2.48AlaHis: 2.48 ± 0.0
2.894AlaIle: 2.894 ± 0.0
2.067AlaLys: 2.067 ± 0.0
4.134AlaLeu: 4.134 ± 0.0
1.24AlaMet: 1.24 ± 0.0
2.48AlaAsn: 2.48 ± 0.0
4.961AlaPro: 4.961 ± 0.0
1.654AlaGln: 1.654 ± 0.0
3.721AlaArg: 3.721 ± 0.0
6.201AlaSer: 6.201 ± 0.0
6.201AlaThr: 6.201 ± 0.0
6.201AlaVal: 6.201 ± 0.0
0.827AlaTrp: 0.827 ± 0.0
0.0AlaTyr: 0.0 ± 0.0
0.0AlaXaa: 0.0 ± 0.0
Cys
0.827CysAla: 0.827 ± 0.0
0.413CysCys: 0.413 ± 0.0
2.067CysAsp: 2.067 ± 0.0
1.654CysGlu: 1.654 ± 0.0
0.413CysPhe: 0.413 ± 0.0
1.654CysGly: 1.654 ± 0.0
0.827CysHis: 0.827 ± 0.0
0.413CysIle: 0.413 ± 0.0
1.654CysLys: 1.654 ± 0.0
1.24CysLeu: 1.24 ± 0.0
0.0CysMet: 0.0 ± 0.0
0.413CysAsn: 0.413 ± 0.0
0.0CysPro: 0.0 ± 0.0
0.0CysGln: 0.0 ± 0.0
1.24CysArg: 1.24 ± 0.0
0.0CysSer: 0.0 ± 0.0
0.827CysThr: 0.827 ± 0.0
1.24CysVal: 1.24 ± 0.0
0.413CysTrp: 0.413 ± 0.0
0.413CysTyr: 0.413 ± 0.0
0.0CysXaa: 0.0 ± 0.0
Asp
3.307AspAla: 3.307 ± 0.0
0.0AspCys: 0.0 ± 0.0
4.134AspAsp: 4.134 ± 0.0
3.721AspGlu: 3.721 ± 0.0
3.721AspPhe: 3.721 ± 0.0
4.134AspGly: 4.134 ± 0.0
2.067AspHis: 2.067 ± 0.0
3.721AspIle: 3.721 ± 0.0
4.134AspLys: 4.134 ± 0.0
5.374AspLeu: 5.374 ± 0.0
3.307AspMet: 3.307 ± 0.0
1.24AspAsn: 1.24 ± 0.0
3.721AspPro: 3.721 ± 0.0
1.654AspGln: 1.654 ± 0.0
2.067AspArg: 2.067 ± 0.0
3.307AspSer: 3.307 ± 0.0
4.134AspThr: 4.134 ± 0.0
6.614AspVal: 6.614 ± 0.0
0.413AspTrp: 0.413 ± 0.0
2.894AspTyr: 2.894 ± 0.0
0.0AspXaa: 0.0 ± 0.0
Glu
2.894GluAla: 2.894 ± 0.0
0.413GluCys: 0.413 ± 0.0
4.134GluAsp: 4.134 ± 0.0
2.067GluGlu: 2.067 ± 0.0
3.307GluPhe: 3.307 ± 0.0
4.961GluGly: 4.961 ± 0.0
0.827GluHis: 0.827 ± 0.0
2.48GluIle: 2.48 ± 0.0
1.654GluLys: 1.654 ± 0.0
4.134GluLeu: 4.134 ± 0.0
0.827GluMet: 0.827 ± 0.0
2.067GluAsn: 2.067 ± 0.0
1.24GluPro: 1.24 ± 0.0
2.067GluGln: 2.067 ± 0.0
1.654GluArg: 1.654 ± 0.0
2.067GluSer: 2.067 ± 0.0
2.894GluThr: 2.894 ± 0.0
4.134GluVal: 4.134 ± 0.0
0.413GluTrp: 0.413 ± 0.0
0.827GluTyr: 0.827 ± 0.0
0.0GluXaa: 0.0 ± 0.0
Phe
2.067PheAla: 2.067 ± 0.0
0.827PheCys: 0.827 ± 0.0
4.134PheAsp: 4.134 ± 0.0
2.48PheGlu: 2.48 ± 0.0
2.48PhePhe: 2.48 ± 0.0
3.721PheGly: 3.721 ± 0.0
2.067PheHis: 2.067 ± 0.0
2.48PheIle: 2.48 ± 0.0
1.654PheLys: 1.654 ± 0.0
5.374PheLeu: 5.374 ± 0.0
0.827PheMet: 0.827 ± 0.0
0.827PheAsn: 0.827 ± 0.0
3.307PhePro: 3.307 ± 0.0
3.307PheGln: 3.307 ± 0.0
2.067PheArg: 2.067 ± 0.0
4.134PheSer: 4.134 ± 0.0
4.134PheThr: 4.134 ± 0.0
4.547PheVal: 4.547 ± 0.0
2.48PheTrp: 2.48 ± 0.0
2.48PheTyr: 2.48 ± 0.0
0.0PheXaa: 0.0 ± 0.0
Gly
4.134GlyAla: 4.134 ± 0.0
2.067GlyCys: 2.067 ± 0.0
3.721GlyAsp: 3.721 ± 0.0
1.24GlyGlu: 1.24 ± 0.0
4.134GlyPhe: 4.134 ± 0.0
3.307GlyGly: 3.307 ± 0.0
2.894GlyHis: 2.894 ± 0.0
3.307GlyIle: 3.307 ± 0.0
2.894GlyLys: 2.894 ± 0.0
6.201GlyLeu: 6.201 ± 0.0
2.067GlyMet: 2.067 ± 0.0
1.24GlyAsn: 1.24 ± 0.0
2.894GlyPro: 2.894 ± 0.0
2.067GlyGln: 2.067 ± 0.0
3.307GlyArg: 3.307 ± 0.0
3.307GlySer: 3.307 ± 0.0
4.547GlyThr: 4.547 ± 0.0
8.268GlyVal: 8.268 ± 0.0
1.654GlyTrp: 1.654 ± 0.0
2.894GlyTyr: 2.894 ± 0.0
0.0GlyXaa: 0.0 ± 0.0
His
2.48HisAla: 2.48 ± 0.0
0.413HisCys: 0.413 ± 0.0
0.827HisAsp: 0.827 ± 0.0
0.0HisGlu: 0.0 ± 0.0
3.307HisPhe: 3.307 ± 0.0
2.067HisGly: 2.067 ± 0.0
0.827HisHis: 0.827 ± 0.0
1.654HisIle: 1.654 ± 0.0
0.413HisLys: 0.413 ± 0.0
3.307HisLeu: 3.307 ± 0.0
0.0HisMet: 0.0 ± 0.0
0.413HisAsn: 0.413 ± 0.0
1.654HisPro: 1.654 ± 0.0
1.654HisGln: 1.654 ± 0.0
2.067HisArg: 2.067 ± 0.0
1.24HisSer: 1.24 ± 0.0
1.654HisThr: 1.654 ± 0.0
1.654HisVal: 1.654 ± 0.0
0.0HisTrp: 0.0 ± 0.0
1.654HisTyr: 1.654 ± 0.0
0.0HisXaa: 0.0 ± 0.0
Ile
2.48IleAla: 2.48 ± 0.0
0.413IleCys: 0.413 ± 0.0
2.894IleAsp: 2.894 ± 0.0
2.894IleGlu: 2.894 ± 0.0
2.48IlePhe: 2.48 ± 0.0
2.48IleGly: 2.48 ± 0.0
2.894IleHis: 2.894 ± 0.0
2.894IleIle: 2.894 ± 0.0
1.24IleLys: 1.24 ± 0.0
4.547IleLeu: 4.547 ± 0.0
0.827IleMet: 0.827 ± 0.0
1.24IleAsn: 1.24 ± 0.0
4.547IlePro: 4.547 ± 0.0
1.654IleGln: 1.654 ± 0.0
2.48IleArg: 2.48 ± 0.0
3.307IleSer: 3.307 ± 0.0
1.654IleThr: 1.654 ± 0.0
5.374IleVal: 5.374 ± 0.0
0.413IleTrp: 0.413 ± 0.0
1.654IleTyr: 1.654 ± 0.0
0.0IleXaa: 0.0 ± 0.0
Lys
2.48LysAla: 2.48 ± 0.0
1.654LysCys: 1.654 ± 0.0
2.48LysAsp: 2.48 ± 0.0
1.24LysGlu: 1.24 ± 0.0
1.654LysPhe: 1.654 ± 0.0
1.654LysGly: 1.654 ± 0.0
2.067LysHis: 2.067 ± 0.0
2.067LysIle: 2.067 ± 0.0
3.307LysLys: 3.307 ± 0.0
3.721LysLeu: 3.721 ± 0.0
0.0LysMet: 0.0 ± 0.0
1.24LysAsn: 1.24 ± 0.0
2.48LysPro: 2.48 ± 0.0
1.24LysGln: 1.24 ± 0.0
2.067LysArg: 2.067 ± 0.0
2.48LysSer: 2.48 ± 0.0
1.654LysThr: 1.654 ± 0.0
4.134LysVal: 4.134 ± 0.0
0.827LysTrp: 0.827 ± 0.0
1.654LysTyr: 1.654 ± 0.0
0.0LysXaa: 0.0 ± 0.0
Leu
8.268LeuAla: 8.268 ± 0.0
1.654LeuCys: 1.654 ± 0.0
4.961LeuAsp: 4.961 ± 0.0
7.028LeuGlu: 7.028 ± 0.0
4.134LeuPhe: 4.134 ± 0.0
4.961LeuGly: 4.961 ± 0.0
2.067LeuHis: 2.067 ± 0.0
4.547LeuIle: 4.547 ± 0.0
2.894LeuLys: 2.894 ± 0.0
5.788LeuLeu: 5.788 ± 0.0
0.413LeuMet: 0.413 ± 0.0
3.307LeuAsn: 3.307 ± 0.0
3.721LeuPro: 3.721 ± 0.0
6.201LeuGln: 6.201 ± 0.0
4.961LeuArg: 4.961 ± 0.0
6.201LeuSer: 6.201 ± 0.0
3.721LeuThr: 3.721 ± 0.0
7.441LeuVal: 7.441 ± 0.0
1.24LeuTrp: 1.24 ± 0.0
3.721LeuTyr: 3.721 ± 0.0
0.0LeuXaa: 0.0 ± 0.0
Met
2.48MetAla: 2.48 ± 0.0
0.0MetCys: 0.0 ± 0.0
1.24MetAsp: 1.24 ± 0.0
0.413MetGlu: 0.413 ± 0.0
0.413MetPhe: 0.413 ± 0.0
2.894MetGly: 2.894 ± 0.0
0.413MetHis: 0.413 ± 0.0
2.48MetIle: 2.48 ± 0.0
0.827MetLys: 0.827 ± 0.0
2.067MetLeu: 2.067 ± 0.0
0.827MetMet: 0.827 ± 0.0
0.827MetAsn: 0.827 ± 0.0
1.654MetPro: 1.654 ± 0.0
0.413MetGln: 0.413 ± 0.0
0.413MetArg: 0.413 ± 0.0
0.413MetSer: 0.413 ± 0.0
1.24MetThr: 1.24 ± 0.0
2.48MetVal: 2.48 ± 0.0
1.24MetTrp: 1.24 ± 0.0
0.413MetTyr: 0.413 ± 0.0
0.0MetXaa: 0.0 ± 0.0
Asn
3.721AsnAla: 3.721 ± 0.0
0.413AsnCys: 0.413 ± 0.0
1.654AsnAsp: 1.654 ± 0.0
0.413AsnGlu: 0.413 ± 0.0
1.24AsnPhe: 1.24 ± 0.0
2.067AsnGly: 2.067 ± 0.0
0.0AsnHis: 0.0 ± 0.0
1.24AsnIle: 1.24 ± 0.0
1.24AsnLys: 1.24 ± 0.0
4.547AsnLeu: 4.547 ± 0.0
2.067AsnMet: 2.067 ± 0.0
0.413AsnAsn: 0.413 ± 0.0
0.827AsnPro: 0.827 ± 0.0
0.827AsnGln: 0.827 ± 0.0
2.067AsnArg: 2.067 ± 0.0
2.067AsnSer: 2.067 ± 0.0
1.654AsnThr: 1.654 ± 0.0
4.134AsnVal: 4.134 ± 0.0
0.413AsnTrp: 0.413 ± 0.0
1.24AsnTyr: 1.24 ± 0.0
0.0AsnXaa: 0.0 ± 0.0
Pro
4.134ProAla: 4.134 ± 0.0
1.654ProCys: 1.654 ± 0.0
3.307ProAsp: 3.307 ± 0.0
3.721ProGlu: 3.721 ± 0.0
3.721ProPhe: 3.721 ± 0.0
3.307ProGly: 3.307 ± 0.0
0.413ProHis: 0.413 ± 0.0
3.307ProIle: 3.307 ± 0.0
1.24ProLys: 1.24 ± 0.0
4.961ProLeu: 4.961 ± 0.0
1.24ProMet: 1.24 ± 0.0
0.413ProAsn: 0.413 ± 0.0
2.48ProPro: 2.48 ± 0.0
0.413ProGln: 0.413 ± 0.0
2.067ProArg: 2.067 ± 0.0
4.134ProSer: 4.134 ± 0.0
2.894ProThr: 2.894 ± 0.0
6.201ProVal: 6.201 ± 0.0
0.413ProTrp: 0.413 ± 0.0
3.307ProTyr: 3.307 ± 0.0
0.0ProXaa: 0.0 ± 0.0
Gln
3.721GlnAla: 3.721 ± 0.0
0.0GlnCys: 0.0 ± 0.0
2.894GlnAsp: 2.894 ± 0.0
0.413GlnGlu: 0.413 ± 0.0
2.067GlnPhe: 2.067 ± 0.0
5.788GlnGly: 5.788 ± 0.0
1.24GlnHis: 1.24 ± 0.0
2.067GlnIle: 2.067 ± 0.0
2.48GlnLys: 2.48 ± 0.0
2.48GlnLeu: 2.48 ± 0.0
1.24GlnMet: 1.24 ± 0.0
0.827GlnAsn: 0.827 ± 0.0
2.48GlnPro: 2.48 ± 0.0
2.067GlnGln: 2.067 ± 0.0
0.827GlnArg: 0.827 ± 0.0
2.067GlnSer: 2.067 ± 0.0
1.24GlnThr: 1.24 ± 0.0
4.134GlnVal: 4.134 ± 0.0
0.0GlnTrp: 0.0 ± 0.0
2.067GlnTyr: 2.067 ± 0.0
0.0GlnXaa: 0.0 ± 0.0
Arg
2.48ArgAla: 2.48 ± 0.0
1.24ArgCys: 1.24 ± 0.0
2.067ArgAsp: 2.067 ± 0.0
2.067ArgGlu: 2.067 ± 0.0
4.134ArgPhe: 4.134 ± 0.0
2.48ArgGly: 2.48 ± 0.0
1.24ArgHis: 1.24 ± 0.0
3.307ArgIle: 3.307 ± 0.0
0.827ArgLys: 0.827 ± 0.0
4.961ArgLeu: 4.961 ± 0.0
2.067ArgMet: 2.067 ± 0.0
3.307ArgAsn: 3.307 ± 0.0
2.48ArgPro: 2.48 ± 0.0
0.413ArgGln: 0.413 ± 0.0
4.134ArgArg: 4.134 ± 0.0
3.721ArgSer: 3.721 ± 0.0
2.894ArgThr: 2.894 ± 0.0
4.547ArgVal: 4.547 ± 0.0
0.413ArgTrp: 0.413 ± 0.0
2.48ArgTyr: 2.48 ± 0.0
0.0ArgXaa: 0.0 ± 0.0
Ser
5.374SerAla: 5.374 ± 0.0
0.413SerCys: 0.413 ± 0.0
6.201SerAsp: 6.201 ± 0.0
1.654SerGlu: 1.654 ± 0.0
3.721SerPhe: 3.721 ± 0.0
3.307SerGly: 3.307 ± 0.0
0.413SerHis: 0.413 ± 0.0
2.067SerIle: 2.067 ± 0.0
2.48SerLys: 2.48 ± 0.0
5.788SerLeu: 5.788 ± 0.0
2.067SerMet: 2.067 ± 0.0
1.654SerAsn: 1.654 ± 0.0
4.961SerPro: 4.961 ± 0.0
1.654SerGln: 1.654 ± 0.0
3.307SerArg: 3.307 ± 0.0
6.614SerSer: 6.614 ± 0.0
4.134SerThr: 4.134 ± 0.0
6.614SerVal: 6.614 ± 0.0
2.067SerTrp: 2.067 ± 0.0
4.547SerTyr: 4.547 ± 0.0
0.0SerXaa: 0.0 ± 0.0
Thr
4.961ThrAla: 4.961 ± 0.0
1.24ThrCys: 1.24 ± 0.0
3.721ThrAsp: 3.721 ± 0.0
2.48ThrGlu: 2.48 ± 0.0
4.961ThrPhe: 4.961 ± 0.0
4.547ThrGly: 4.547 ± 0.0
0.827ThrHis: 0.827 ± 0.0
1.24ThrIle: 1.24 ± 0.0
3.721ThrLys: 3.721 ± 0.0
5.788ThrLeu: 5.788 ± 0.0
0.413ThrMet: 0.413 ± 0.0
3.721ThrAsn: 3.721 ± 0.0
2.48ThrPro: 2.48 ± 0.0
3.307ThrGln: 3.307 ± 0.0
2.067ThrArg: 2.067 ± 0.0
4.961ThrSer: 4.961 ± 0.0
5.374ThrThr: 5.374 ± 0.0
6.614ThrVal: 6.614 ± 0.0
0.0ThrTrp: 0.0 ± 0.0
0.827ThrTyr: 0.827 ± 0.0
0.0ThrXaa: 0.0 ± 0.0
Val
5.374ValAla: 5.374 ± 0.0
1.654ValCys: 1.654 ± 0.0
4.547ValAsp: 4.547 ± 0.0
6.614ValGlu: 6.614 ± 0.0
4.547ValPhe: 4.547 ± 0.0
6.614ValGly: 6.614 ± 0.0
1.24ValHis: 1.24 ± 0.0
3.307ValIle: 3.307 ± 0.0
2.48ValLys: 2.48 ± 0.0
7.854ValLeu: 7.854 ± 0.0
1.654ValMet: 1.654 ± 0.0
4.961ValAsn: 4.961 ± 0.0
4.961ValPro: 4.961 ± 0.0
4.961ValGln: 4.961 ± 0.0
6.614ValArg: 6.614 ± 0.0
7.441ValSer: 7.441 ± 0.0
8.681ValThr: 8.681 ± 0.0
9.921ValVal: 9.921 ± 0.0
0.827ValTrp: 0.827 ± 0.0
4.134ValTyr: 4.134 ± 0.0
0.0ValXaa: 0.0 ± 0.0
Trp
0.413TrpAla: 0.413 ± 0.0
0.0TrpCys: 0.0 ± 0.0
0.827TrpAsp: 0.827 ± 0.0
0.0TrpGlu: 0.0 ± 0.0
0.413TrpPhe: 0.413 ± 0.0
0.0TrpGly: 0.0 ± 0.0
0.413TrpHis: 0.413 ± 0.0
0.827TrpIle: 0.827 ± 0.0
1.654TrpLys: 1.654 ± 0.0
1.24TrpLeu: 1.24 ± 0.0
0.0TrpMet: 0.0 ± 0.0
0.413TrpAsn: 0.413 ± 0.0
1.654TrpPro: 1.654 ± 0.0
0.827TrpGln: 0.827 ± 0.0
1.654TrpArg: 1.654 ± 0.0
1.654TrpSer: 1.654 ± 0.0
2.067TrpThr: 2.067 ± 0.0
0.413TrpVal: 0.413 ± 0.0
0.413TrpTrp: 0.413 ± 0.0
0.0TrpTyr: 0.0 ± 0.0
0.0TrpXaa: 0.0 ± 0.0
Tyr
2.067TyrAla: 2.067 ± 0.0
0.0TyrCys: 0.0 ± 0.0
2.48TyrAsp: 2.48 ± 0.0
0.0TyrGlu: 0.0 ± 0.0
1.654TyrPhe: 1.654 ± 0.0
2.48TyrGly: 2.48 ± 0.0
2.067TyrHis: 2.067 ± 0.0
2.067TyrIle: 2.067 ± 0.0
1.24TyrLys: 1.24 ± 0.0
3.721TyrLeu: 3.721 ± 0.0
1.654TyrMet: 1.654 ± 0.0
1.24TyrAsn: 1.24 ± 0.0
0.827TyrPro: 0.827 ± 0.0
3.721TyrGln: 3.721 ± 0.0
2.48TyrArg: 2.48 ± 0.0
3.721TyrSer: 3.721 ± 0.0
1.654TyrThr: 1.654 ± 0.0
3.721TyrVal: 3.721 ± 0.0
0.413TyrTrp: 0.413 ± 0.0
0.827TyrTyr: 0.827 ± 0.0
0.0TyrXaa: 0.0 ± 0.0
Xaa
0.0XaaAla: 0.0 ± 0.0
0.0XaaCys: 0.0 ± 0.0
0.0XaaAsp: 0.0 ± 0.0
0.0XaaGlu: 0.0 ± 0.0
0.0XaaPhe: 0.0 ± 0.0
0.0XaaGly: 0.0 ± 0.0
0.0XaaHis: 0.0 ± 0.0
0.0XaaIle: 0.0 ± 0.0
0.0XaaLys: 0.0 ± 0.0
0.0XaaLeu: 0.0 ± 0.0
0.0XaaMet: 0.0 ± 0.0
0.0XaaAsn: 0.0 ± 0.0
0.0XaaPro: 0.0 ± 0.0
0.0XaaGln: 0.0 ± 0.0
0.0XaaArg: 0.0 ± 0.0
0.0XaaSer: 0.0 ± 0.0
0.0XaaThr: 0.0 ± 0.0
0.0XaaVal: 0.0 ± 0.0
0.0XaaTrp: 0.0 ± 0.0
0.0XaaTyr: 0.0 ± 0.0
0.0XaaXaa: 0.0 ± 0.0
Statistics based on 1 proteins (2420 amino acids)

Note: The error has been estimated with the bootstraping (x100) at the protein level

Above dipeptide statistics (among other stats for this proteome) you can download from this CSV file
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski