Odonata-associated circular virus-19

Taxonomy: Viruses; unclassified viruses; unclassified DNA viruses; unclassified ssDNA viruses

Average proteome isoelectric point is 8.03

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0B4UH55|A0A0B4UH55_9VIRU Putative capsid protein OS=Odonata-associated circular virus-19 OX=1592119 PE=4 SV=1
MM1 pKa = 7.51SFQYY5 pKa = 10.83HH6 pKa = 5.54NFVFTSFKK14 pKa = 10.46TEE16 pKa = 3.74DD17 pKa = 3.39FEE19 pKa = 5.44RR20 pKa = 11.84VLGLDD25 pKa = 3.05VQYY28 pKa = 10.79IIVGKK33 pKa = 7.05EE34 pKa = 3.69TCPEE38 pKa = 4.03TKK40 pKa = 9.58RR41 pKa = 11.84EE42 pKa = 3.95HH43 pKa = 5.72LQGYY47 pKa = 9.45CEE49 pKa = 4.44LDD51 pKa = 3.24KK52 pKa = 11.07KK53 pKa = 10.22KK54 pKa = 9.44TMAGIKK60 pKa = 10.11KK61 pKa = 10.01LFSDD65 pKa = 4.42DD66 pKa = 3.79SLHH69 pKa = 7.05IEE71 pKa = 4.32ARR73 pKa = 11.84KK74 pKa = 8.35GTQKK78 pKa = 10.63EE79 pKa = 4.05AIIYY83 pKa = 7.25CQKK86 pKa = 9.89EE87 pKa = 4.6GNWKK91 pKa = 9.3EE92 pKa = 4.02AGVQRR97 pKa = 11.84KK98 pKa = 8.55QGSRR102 pKa = 11.84GDD104 pKa = 3.67LDD106 pKa = 3.81GARR109 pKa = 11.84VMAVEE114 pKa = 4.05SGMRR118 pKa = 11.84AVSRR122 pKa = 11.84SMNMQQIRR130 pKa = 11.84VAEE133 pKa = 4.13KK134 pKa = 8.39FLSYY138 pKa = 10.96NEE140 pKa = 4.47EE141 pKa = 3.79VRR143 pKa = 11.84DD144 pKa = 3.86WKK146 pKa = 10.92PEE148 pKa = 3.87VLWFWGDD155 pKa = 3.29SGSGKK160 pKa = 9.92SRR162 pKa = 11.84EE163 pKa = 4.0ARR165 pKa = 11.84FISHH169 pKa = 7.07GLDD172 pKa = 2.87TYY174 pKa = 11.43VKK176 pKa = 9.09NTGGKK181 pKa = 7.54WWDD184 pKa = 3.89GYY186 pKa = 11.03DD187 pKa = 3.25GHH189 pKa = 6.44EE190 pKa = 4.31VVIIDD195 pKa = 5.29DD196 pKa = 5.29FRR198 pKa = 11.84DD199 pKa = 3.46SWWALTYY206 pKa = 10.22FLACTDD212 pKa = 3.24RR213 pKa = 11.84YY214 pKa = 10.09EE215 pKa = 4.25FQVEE219 pKa = 4.32VKK221 pKa = 10.7GGFRR225 pKa = 11.84QLRR228 pKa = 11.84AKK230 pKa = 9.85MIIITSLFHH239 pKa = 6.09PKK241 pKa = 10.22YY242 pKa = 9.49MYY244 pKa = 10.58RR245 pKa = 11.84EE246 pKa = 4.1AQAKK250 pKa = 10.16GDD252 pKa = 3.49TAYY255 pKa = 10.89QILRR259 pKa = 11.84RR260 pKa = 11.84IDD262 pKa = 3.69SVVHH266 pKa = 6.3FGSQKK271 pKa = 10.6PEE273 pKa = 3.72VGGNTIAPTVSNFIDD288 pKa = 3.61EE289 pKa = 4.91TIGLLL294 pKa = 4.02

Molecular weight: 33.91 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0B4UH55|A0A0B4UH55_9VIRU Putative capsid protein OS=Odonata-associated circular virus-19 OX=1592119 PE=4 SV=1
MM1 pKa = 7.59AIIRR5 pKa = 11.84RR6 pKa = 11.84SFRR9 pKa = 11.84RR10 pKa = 11.84RR11 pKa = 11.84RR12 pKa = 11.84PSARR16 pKa = 11.84KK17 pKa = 5.41PTRR20 pKa = 11.84RR21 pKa = 11.84YY22 pKa = 6.9TRR24 pKa = 11.84RR25 pKa = 11.84PRR27 pKa = 11.84VAAKK31 pKa = 9.0RR32 pKa = 11.84TGAPRR37 pKa = 11.84TMRR40 pKa = 11.84NSNTSQLIAPRR51 pKa = 11.84YY52 pKa = 6.86ITTLKK57 pKa = 9.51YY58 pKa = 10.3CEE60 pKa = 4.33RR61 pKa = 11.84DD62 pKa = 3.61SVVTSVSGASGADD75 pKa = 3.44LYY77 pKa = 11.48NLNSIFDD84 pKa = 4.27PDD86 pKa = 3.42RR87 pKa = 11.84TGTGHH92 pKa = 6.35QPLGHH97 pKa = 6.94DD98 pKa = 3.89QLQLLYY104 pKa = 10.83NRR106 pKa = 11.84YY107 pKa = 9.33RR108 pKa = 11.84VFGVSWRR115 pKa = 11.84VTFYY119 pKa = 11.19QPGAGVAGLFAVFPQNNALTQNGVSTSVLKK149 pKa = 10.19EE150 pKa = 3.84LPHH153 pKa = 7.0AFTKK157 pKa = 10.74LSRR160 pKa = 11.84ADD162 pKa = 3.47QPVVFTGRR170 pKa = 11.84VSLPKK175 pKa = 9.92LTGQTPAQFKK185 pKa = 10.95AGLEE189 pKa = 4.06YY190 pKa = 10.6QATFGASPSEE200 pKa = 4.0LQTLLVAVNPVTTGAQTFNYY220 pKa = 9.53EE221 pKa = 3.83IEE223 pKa = 4.28LKK225 pKa = 10.83YY226 pKa = 10.43HH227 pKa = 5.82VEE229 pKa = 4.17CFDD232 pKa = 5.91PIPLAQSS239 pKa = 3.18

Molecular weight: 26.6 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

533

239

294

266.5

30.25

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.942 ± 1.242

1.126 ± 0.194

4.878 ± 1.312

5.441 ± 1.691

5.253 ± 0.156

7.88 ± 0.798

2.064 ± 0.263

4.69 ± 1.186

5.816 ± 1.662

7.129 ± 1.116

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.876 ± 0.7

3.189 ± 0.67

4.128 ± 2.01

5.253 ± 0.407

7.88 ± 1.174

6.567 ± 0.368

6.942 ± 1.524

7.129 ± 0.271

1.689 ± 0.855

4.128 ± 0.038
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski