Meiothermus phage MMP17

Taxonomy: Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; unclassified Myoviridae

Average proteome isoelectric point is 6.96

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 66 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A411CW21|A0A411CW21_9CAUD Uncharacterized protein OS=Meiothermus phage MMP17 OX=2483662 PE=4 SV=1
MM1 pKa = 7.24CQEE4 pKa = 4.39CQGCGYY10 pKa = 10.11VEE12 pKa = 4.32YY13 pKa = 10.92VAGFYY18 pKa = 10.83FSDD21 pKa = 3.39SFGNYY26 pKa = 9.42LPRR29 pKa = 11.84EE30 pKa = 4.13EE31 pKa = 4.13IARR34 pKa = 11.84CEE36 pKa = 4.28VCDD39 pKa = 3.43GTGFVEE45 pKa = 5.14VWDD48 pKa = 3.73EE49 pKa = 4.3DD50 pKa = 4.06EE51 pKa = 5.73AVLEE55 pKa = 4.42GDD57 pKa = 3.85GG58 pKa = 4.34

Molecular weight: 6.49 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A411CVZ3|A0A411CVZ3_9CAUD Uncharacterized protein OS=Meiothermus phage MMP17 OX=2483662 PE=4 SV=1
MM1 pKa = 7.55GWRR4 pKa = 11.84SIPSWGSRR12 pKa = 11.84SFSRR16 pKa = 11.84KK17 pKa = 9.44SPAHH21 pKa = 5.98RR22 pKa = 11.84AGGGATSLRR31 pKa = 11.84RR32 pKa = 11.84AWPSGSSATAKK43 pKa = 9.4WGCLSRR49 pKa = 11.84SSSTRR54 pKa = 11.84RR55 pKa = 11.84GSAGGLRR62 pKa = 11.84GMTATTPATPHH73 pKa = 5.7MRR75 pKa = 11.84CPAPPAPARR84 pKa = 11.84GVGATTSPVGGARR97 pKa = 11.84GGEE100 pKa = 3.83PMARR104 pKa = 11.84RR105 pKa = 11.84VKK107 pKa = 10.48QIAPGLSVVKK117 pKa = 8.67TAPFWRR123 pKa = 11.84GDD125 pKa = 3.28DD126 pKa = 3.15RR127 pKa = 11.84VYY129 pKa = 11.31EE130 pKa = 5.0FIHH133 pKa = 6.5EE134 pKa = 4.03PTGAVLCCGSPPLWRR149 pKa = 11.84FKK151 pKa = 10.92RR152 pKa = 11.84RR153 pKa = 11.84VVEE156 pKa = 3.85LAEE159 pKa = 4.27PQLALLDD166 pKa = 3.98WTNLDD171 pKa = 3.98PDD173 pKa = 4.86DD174 pKa = 4.56PLNYY178 pKa = 9.72PIYY181 pKa = 9.81RR182 pKa = 11.84DD183 pKa = 3.11EE184 pKa = 4.49FYY186 pKa = 10.83RR187 pKa = 11.84IIRR190 pKa = 11.84EE191 pKa = 3.96SLEE194 pKa = 3.65RR195 pKa = 11.84ARR197 pKa = 11.84AEE199 pKa = 4.2EE200 pKa = 4.48EE201 pKa = 3.86EE202 pKa = 4.51TAA204 pKa = 4.48

Molecular weight: 22.23 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

66

0

66

12725

40

748

192.8

21.11

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

11.827 ± 0.451

1.061 ± 0.19

4.401 ± 0.218

6.413 ± 0.432

2.452 ± 0.195

9.548 ± 0.424

1.917 ± 0.205

3.788 ± 0.279

2.365 ± 0.266

10.625 ± 0.36

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.525 ± 0.099

2.46 ± 0.302

6.703 ± 0.353

3.859 ± 0.213

8.864 ± 0.397

5.336 ± 0.246

5.1 ± 0.35

6.499 ± 0.309

2.475 ± 0.203

2.782 ± 0.221
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski