Wuhan Insect virus 7
Average proteome isoelectric point is 6.23
Get precalculated fractions of proteins
Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
All
Note: above files contain also dissociation constants (pKa)
Virtual 2D-PAGE plot for 5 proteins (isoelectric point calculated using IPC2_protein)
Get csv file with sequences according to given criteria:
* You can choose from 21 different methods for calculating isoelectric point
Summary statistics related to proteome-wise predictions
Protein with the lowest isoelectric point:
>tr|A0A0B5KXP4|A0A0B5KXP4_9RHAB Putative phosphoprotein OS=Wuhan Insect virus 7 OX=1608112 GN=ORF2 PE=4 SV=1
MM1 pKa = 7.26 KK2 pKa = 9.48 QQNYY6 pKa = 9.31 IYY8 pKa = 10.33 PSMEE12 pKa = 3.83 LRR14 pKa = 11.84 NLTGPKK20 pKa = 10.05 KK21 pKa = 10.3 FFASGKK27 pKa = 9.84 GYY29 pKa = 8.49 LTKK32 pKa = 10.24 EE33 pKa = 3.9 YY34 pKa = 10.09 RR35 pKa = 11.84 NSPFAEE41 pKa = 3.97 QGQLAVATNPRR52 pKa = 11.84 RR53 pKa = 11.84 TSWAMSDD60 pKa = 3.43 EE61 pKa = 4.24 EE62 pKa = 5.54 GNIKK66 pKa = 10.61 DD67 pKa = 5.2 LGDD70 pKa = 3.83 AFQKK74 pKa = 10.55 EE75 pKa = 4.7 LEE77 pKa = 4.37 QKK79 pKa = 10.43 HH80 pKa = 6.43 SSDD83 pKa = 3.76 SDD85 pKa = 3.73 SQTSVSSNDD94 pKa = 3.59 TVKK97 pKa = 9.97 MDD99 pKa = 4.99 PPPPPPPEE107 pKa = 3.66 EE108 pKa = 4.48 DD109 pKa = 3.3 MIEE112 pKa = 4.02 LVLPYY117 pKa = 9.65 MEE119 pKa = 5.6 IDD121 pKa = 3.79 LARR124 pKa = 11.84 KK125 pKa = 6.68 VTEE128 pKa = 5.29 AIDD131 pKa = 3.9 LALKK135 pKa = 10.53 DD136 pKa = 4.61 LIIDD140 pKa = 3.99 RR141 pKa = 11.84 SLPRR145 pKa = 11.84 IKK147 pKa = 11.02 YY148 pKa = 9.36 MMVPKK153 pKa = 9.88 PKK155 pKa = 9.87 EE156 pKa = 3.98 ATPPPPPLQPPQEE169 pKa = 4.27 TSTPPMQAQPSTSMPKK185 pKa = 10.1 RR186 pKa = 11.84 SGPLPPTEE194 pKa = 4.01 STSRR198 pKa = 11.84 EE199 pKa = 3.94 RR200 pKa = 11.84 EE201 pKa = 3.49 RR202 pKa = 11.84 SALVVEE208 pKa = 5.06 FMKK211 pKa = 10.78 GVKK214 pKa = 9.74 LVGIYY219 pKa = 10.13 EE220 pKa = 4.15 PEE222 pKa = 3.49 QTYY225 pKa = 7.7 TLKK228 pKa = 10.59 IGVGGVTEE236 pKa = 4.46 DD237 pKa = 5.16 LINEE241 pKa = 4.07 VNEE244 pKa = 4.15 QGLDD248 pKa = 3.32 QPTQEE253 pKa = 4.62 FIEE256 pKa = 4.26 NLLCRR261 pKa = 11.84 LEE263 pKa = 4.18 YY264 pKa = 10.83 GQTLHH269 pKa = 6.94 SLYY272 pKa = 10.81 EE273 pKa = 3.98 LAA275 pKa = 5.75
Molecular weight: 30.87 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 4.903
IPC2_protein 4.902
IPC_protein 4.8
Toseland 4.673
ProMoST 4.889
Dawson 4.736
Bjellqvist 4.876
Wikipedia 4.571
Rodwell 4.647
Grimsley 4.584
Solomon 4.736
Lehninger 4.685
Nozaki 4.838
DTASelect 4.952
Thurlkill 4.66
EMBOSS 4.596
Sillero 4.914
Patrickios 4.164
IPC_peptide 4.736
IPC2_peptide 4.914
IPC2.peptide.svr19 4.872
Protein with the highest isoelectric point:
>tr|A0A0B5KXP4|A0A0B5KXP4_9RHAB Putative phosphoprotein OS=Wuhan Insect virus 7 OX=1608112 GN=ORF2 PE=4 SV=1
MM1 pKa = 7.55 SKK3 pKa = 10.3 KK4 pKa = 10.33 QFFKK8 pKa = 11.21 VGDD11 pKa = 3.62 LTRR14 pKa = 11.84 TQVTLLAPHH23 pKa = 6.44 PQVPAQYY30 pKa = 8.94 PSEE33 pKa = 4.11 YY34 pKa = 10.36 FVNNKK39 pKa = 9.28 NKK41 pKa = 9.65 PKK43 pKa = 10.56 VVLSVKK49 pKa = 10.1 GLNVEE54 pKa = 4.46 NIRR57 pKa = 11.84 AVINSGLSNNNLRR70 pKa = 11.84 LAPSLYY76 pKa = 10.46 FIYY79 pKa = 10.18 LYY81 pKa = 10.37 FLNVKK86 pKa = 8.79 TVLTKK91 pKa = 9.77 KK92 pKa = 9.62 WEE94 pKa = 4.11 SFGIKK99 pKa = 10.12 FGDD102 pKa = 3.75 PNEE105 pKa = 4.42 EE106 pKa = 3.83 VTPWSLIDD114 pKa = 3.59 VQLDD118 pKa = 3.33 SDD120 pKa = 4.33 SGVDD124 pKa = 3.53 HH125 pKa = 7.48 PSLEE129 pKa = 4.89 GIAKK133 pKa = 10.19 SDD135 pKa = 4.19 DD136 pKa = 2.97 NWIICLLLSMHH147 pKa = 6.57 RR148 pKa = 11.84 LKK150 pKa = 11.0 SGMLDD155 pKa = 3.37 SYY157 pKa = 11.54 RR158 pKa = 11.84 EE159 pKa = 4.09 IIQKK163 pKa = 10.29 RR164 pKa = 11.84 IYY166 pKa = 10.66 DD167 pKa = 3.37 QMHH170 pKa = 5.34 QYY172 pKa = 10.76 GYY174 pKa = 10.96 KK175 pKa = 9.99 KK176 pKa = 10.42 GGYY179 pKa = 8.01 PSSFTSEE186 pKa = 3.82 DD187 pKa = 3.07 WAGSLDD193 pKa = 3.84 FTRR196 pKa = 11.84 MVAAIDD202 pKa = 3.57 MFLSKK207 pKa = 10.62 FPTLVQSQLRR217 pKa = 11.84 ICTLTSRR224 pKa = 11.84 FKK226 pKa = 11.16 DD227 pKa = 3.5 CTALMSLGFIKK238 pKa = 10.42 EE239 pKa = 4.23 VLCLPDD245 pKa = 3.4 EE246 pKa = 4.67 SEE248 pKa = 4.02 FLDD251 pKa = 4.25 WIFTAPIAAEE261 pKa = 4.01 AEE263 pKa = 3.83 AMARR267 pKa = 11.84 HH268 pKa = 5.25 GQEE271 pKa = 3.71 TLEE274 pKa = 4.37 PDD276 pKa = 3.49 SYY278 pKa = 11.48 FPYY281 pKa = 10.57 QSDD284 pKa = 3.27 LRR286 pKa = 11.84 LVNRR290 pKa = 11.84 THH292 pKa = 6.66 YY293 pKa = 10.46 SASANEE299 pKa = 4.38 NIFFLIHH306 pKa = 7.01 AIGSLLHH313 pKa = 5.67 VQRR316 pKa = 11.84 SMNAKK321 pKa = 8.5 KK322 pKa = 7.45 TTDD325 pKa = 3.07 KK326 pKa = 11.44 NIINNSCNAKK336 pKa = 9.71 IIAYY340 pKa = 8.85 VFSNTFKK347 pKa = 10.37 MAKK350 pKa = 8.99 QYY352 pKa = 10.77 QAIGGPAVQKK362 pKa = 10.87 RR363 pKa = 11.84 NLNINKK369 pKa = 9.56 PEE371 pKa = 4.22 DD372 pKa = 4.2 LEE374 pKa = 4.84 PKK376 pKa = 8.02 TQNAALWYY384 pKa = 10.08 AYY386 pKa = 7.51 MQSYY390 pKa = 10.48 DD391 pKa = 4.19 FKK393 pKa = 10.34 LTPNMRR399 pKa = 11.84 AFVEE403 pKa = 4.29 RR404 pKa = 11.84 SKK406 pKa = 11.8 AEE408 pKa = 3.69 MGEE411 pKa = 4.24 TRR413 pKa = 11.84 EE414 pKa = 4.28 GTIGHH419 pKa = 5.76 YY420 pKa = 8.88 VQHH423 pKa = 6.7 HH424 pKa = 5.56 FF425 pKa = 4.63
Molecular weight: 48.49 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 7.413
IPC2_protein 7.761
IPC_protein 7.673
Toseland 7.614
ProMoST 8.156
Dawson 8.404
Bjellqvist 8.565
Wikipedia 8.39
Rodwell 8.448
Grimsley 7.644
Solomon 8.521
Lehninger 8.521
Nozaki 8.653
DTASelect 8.404
Thurlkill 8.463
EMBOSS 8.609
Sillero 8.726
Patrickios 4.279
IPC_peptide 8.521
IPC2_peptide 7.41
IPC2.peptide.svr19 7.675
Peptides (in silico digests for buttom-up proteomics)
Below you can find
in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.
Try ESI
ChTry ESI
ArgC ESI
LysN ESI
TryLysC ESI
Try MALDI
ChTry MALDI
ArgC MALDI
LysN MALDI
TryLysC MALDI
Try LTQ
ChTry LTQ
ArgC LTQ
LysN LTQ
TryLysC LTQ
Try MSlow
ChTry MSlow
ArgC MSlow
LysN MSlow
TryLysC MSlow
Try MShigh
ChTry MShigh
ArgC MShigh
LysN MShigh
TryLysC MShigh
General Statistics
Number of major isoforms
Number of additional isoforms
Number of all proteins
Number of amino acids
Min. Seq. Length
Max. Seq. Length
Avg. Seq. Length
Avg. Mol. Weight
5
0
5
3554
212
2120
710.8
81.02
Amino acid frequency
Ala
Cys
Asp
Glu
Phe
Gly
His
Ile
Lys
Leu
4.361 ± 0.562
1.716 ± 0.48
5.29 ± 0.099
5.881 ± 0.647
4.221 ± 0.35
5.346 ± 0.142
2.673 ± 0.461
6.669 ± 0.425
6.021 ± 0.269
10.298 ± 0.686
Met
Asn
Gln
Pro
Arg
Ser
Thr
Val
Trp
Tyr
3.011 ± 0.221
4.699 ± 0.336
5.627 ± 0.965
3.658 ± 0.416
5.093 ± 0.473
8.666 ± 0.245
5.515 ± 0.159
5.824 ± 0.76
1.66 ± 0.225
3.77 ± 0.216
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level
Most of the basic statistics you can see at this page can be downloaded from this CSV file
For dipeptide frequency statistics click here