Avian metaavulavirus 8

Taxonomy: Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Paramyxoviridae; Avulavirinae; Metaavulavirus

Average proteome isoelectric point is 5.79

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 8 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|C5I0V2|C5I0V2_9MONO Phosphoprotein OS=Avian metaavulavirus 8 OX=2560318 GN=P PE=4 SV=1
MM1 pKa = 7.39SNIASSLEE9 pKa = 4.09NIVEE13 pKa = 3.88QDD15 pKa = 3.05SRR17 pKa = 11.84KK18 pKa = 6.29TTWRR22 pKa = 11.84AIFRR26 pKa = 11.84WSVLLITTGCLALSIVSIVQIGNLKK51 pKa = 9.78IPSVGDD57 pKa = 3.38LADD60 pKa = 3.74EE61 pKa = 4.38VVTPLKK67 pKa = 8.49TTLSDD72 pKa = 3.5TLRR75 pKa = 11.84NPINQINDD83 pKa = 2.72IFRR86 pKa = 11.84IVALDD91 pKa = 3.39IPLQVTSIQKK101 pKa = 10.27DD102 pKa = 3.48LASQFSMLIDD112 pKa = 3.39SLNAIKK118 pKa = 10.61LGNGTNLIIPTSDD131 pKa = 2.77KK132 pKa = 10.71EE133 pKa = 4.18YY134 pKa = 10.99AGGIGNPVFTVDD146 pKa = 3.25AGGSIGFKK154 pKa = 9.57QFSLIEE160 pKa = 4.29HH161 pKa = 7.17PSFIAGPTTTRR172 pKa = 11.84GCTRR176 pKa = 11.84IPTFHH181 pKa = 6.76MSEE184 pKa = 4.21SHH186 pKa = 5.05WCYY189 pKa = 9.94SHH191 pKa = 7.04NIIAAGCQDD200 pKa = 3.49ASASSMYY207 pKa = 10.46ISMGVLHH214 pKa = 6.54VSSSGTPIFLTTASEE229 pKa = 4.59LIDD232 pKa = 4.71DD233 pKa = 4.47GVNRR237 pKa = 11.84KK238 pKa = 9.16SCSIVATQFGCDD250 pKa = 3.31ILCSIVIEE258 pKa = 4.95KK259 pKa = 10.73EE260 pKa = 3.82GDD262 pKa = 3.87DD263 pKa = 3.97YY264 pKa = 11.52WSDD267 pKa = 3.24TPTPMRR273 pKa = 11.84HH274 pKa = 5.49GRR276 pKa = 11.84FSFNGSFVEE285 pKa = 4.39TEE287 pKa = 4.37LPVSSMFSSFSANYY301 pKa = 8.0PAVGSGEE308 pKa = 4.07IVKK311 pKa = 10.47DD312 pKa = 3.88RR313 pKa = 11.84ILFPIYY319 pKa = 10.55GGIKK323 pKa = 7.85QTSPEE328 pKa = 3.75FTEE331 pKa = 4.16LVKK334 pKa = 11.22YY335 pKa = 10.5GLFVSTPTTVCQSSWTYY352 pKa = 11.11DD353 pKa = 3.39QVKK356 pKa = 9.54AAYY359 pKa = 9.45RR360 pKa = 11.84PDD362 pKa = 4.15YY363 pKa = 10.62ISGRR367 pKa = 11.84FWAQVILSCALDD379 pKa = 3.78AVDD382 pKa = 5.94LSSCIVKK389 pKa = 10.13IMNSSTVMMAAEE401 pKa = 4.06GRR403 pKa = 11.84IIKK406 pKa = 10.18IGIDD410 pKa = 3.03YY411 pKa = 9.78FYY413 pKa = 10.53YY414 pKa = 10.3QRR416 pKa = 11.84SSSWWPLAFVTKK428 pKa = 10.57LDD430 pKa = 3.92PQEE433 pKa = 4.79LADD436 pKa = 4.56TNSIWLTNSIPIPQSKK452 pKa = 9.59FPRR455 pKa = 11.84PSYY458 pKa = 10.67SEE460 pKa = 4.17NYY462 pKa = 6.58CTKK465 pKa = 10.29PAVCPATCVTGVYY478 pKa = 10.43SDD480 pKa = 3.44IWPLTSSSSLPSIIWIGQYY499 pKa = 10.79LDD501 pKa = 3.82APVGRR506 pKa = 11.84TYY508 pKa = 11.06PRR510 pKa = 11.84FGIANQSHH518 pKa = 6.99WYY520 pKa = 8.34LQEE523 pKa = 5.89DD524 pKa = 3.92ILPTSTASAYY534 pKa = 8.49STTTCFKK541 pKa = 8.14NTARR545 pKa = 11.84NRR547 pKa = 11.84VFCVTIAEE555 pKa = 4.31FADD558 pKa = 3.97GLFGEE563 pKa = 4.55YY564 pKa = 9.99RR565 pKa = 11.84ITPQLYY571 pKa = 9.5EE572 pKa = 3.99LVRR575 pKa = 11.84NNN577 pKa = 3.26

Molecular weight: 63.51 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|C5I0V8|C5I0V8_9MONO RNA-directed RNA polymerase L OS=Avian metaavulavirus 8 OX=2560318 GN=L PE=3 SV=1
MM1 pKa = 8.04AYY3 pKa = 6.79TTLKK7 pKa = 10.58LWVDD11 pKa = 3.86EE12 pKa = 4.58GDD14 pKa = 3.52MSSSLLSFPLVLKK27 pKa = 9.21EE28 pKa = 4.05TDD30 pKa = 3.02RR31 pKa = 11.84GTKK34 pKa = 9.82KK35 pKa = 10.22LQPQVRR41 pKa = 11.84VDD43 pKa = 4.33SIGDD47 pKa = 3.38VQNAKK52 pKa = 9.96EE53 pKa = 3.97SSIFVTLYY61 pKa = 11.23GFIQAIKK68 pKa = 9.73EE69 pKa = 3.89NSDD72 pKa = 3.02RR73 pKa = 11.84SKK75 pKa = 10.9FFHH78 pKa = 6.92PKK80 pKa = 10.37DD81 pKa = 3.51DD82 pKa = 4.65FKK84 pKa = 11.56PEE86 pKa = 3.84TVTAGLVVVGAIRR99 pKa = 11.84MMADD103 pKa = 2.93VNTISNDD110 pKa = 3.06ALALEE115 pKa = 4.32ITVKK119 pKa = 10.55KK120 pKa = 10.59SATSQEE126 pKa = 3.74KK127 pKa = 6.8MTVMFHH133 pKa = 6.8NSPPSLRR140 pKa = 11.84TAITIRR146 pKa = 11.84AGGFISNADD155 pKa = 3.83EE156 pKa = 4.63NIKK159 pKa = 10.53CASKK163 pKa = 9.27LTAGVQYY170 pKa = 10.19IFRR173 pKa = 11.84PMFVSITKK181 pKa = 9.55LHH183 pKa = 5.95NGKK186 pKa = 10.22LYY188 pKa = 10.36RR189 pKa = 11.84VPKK192 pKa = 9.32SIHH195 pKa = 6.47SISSTLLYY203 pKa = 10.91SVMLEE208 pKa = 3.83VGFKK212 pKa = 10.35VDD214 pKa = 3.07IGKK217 pKa = 8.82DD218 pKa = 3.26HH219 pKa = 7.14PQAKK223 pKa = 8.32MLKK226 pKa = 9.34RR227 pKa = 11.84VTIGDD232 pKa = 3.87ADD234 pKa = 4.42TYY236 pKa = 10.93WGFAWFHH243 pKa = 6.12LCNFKK248 pKa = 9.49KK249 pKa = 9.27TSSKK253 pKa = 10.71GKK255 pKa = 9.35PRR257 pKa = 11.84TLDD260 pKa = 3.28EE261 pKa = 5.04LRR263 pKa = 11.84TKK265 pKa = 9.75VKK267 pKa = 10.91NMGLKK272 pKa = 10.58LEE274 pKa = 4.77LHH276 pKa = 6.76DD277 pKa = 4.35LWGPTIVVQITGKK290 pKa = 9.42SSKK293 pKa = 9.55YY294 pKa = 8.99AQGFFSSNGTCCLPISRR311 pKa = 11.84SAPEE315 pKa = 4.14LGKK318 pKa = 10.77LLWSCSATIGDD329 pKa = 4.04ATVVIQSSEE338 pKa = 3.84KK339 pKa = 11.01GEE341 pKa = 4.13LLRR344 pKa = 11.84SDD346 pKa = 3.95DD347 pKa = 3.93LEE349 pKa = 4.55IRR351 pKa = 11.84GAVASKK357 pKa = 10.37KK358 pKa = 10.03GRR360 pKa = 11.84LSSFHH365 pKa = 6.72PFKK368 pKa = 10.86KK369 pKa = 10.55

Molecular weight: 40.78 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

6

2

8

5003

172

2238

625.4

69.56

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.056 ± 0.869

1.939 ± 0.306

5.297 ± 0.311

5.277 ± 0.458

3.238 ± 0.55

5.177 ± 0.464

1.919 ± 0.414

7.635 ± 0.54

5.237 ± 0.548

10.194 ± 1.205

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.219 ± 0.27

5.017 ± 0.389

4.517 ± 0.591

4.657 ± 0.559

4.617 ± 0.354

10.014 ± 0.328

6.976 ± 0.547

5.956 ± 0.474

1.099 ± 0.185

2.958 ± 0.478
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski