Bos taurus papillomavirus 19

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Papovaviricetes; Zurhausenvirales; Papillomaviridae; Firstpapillomavirinae; Dyoxipapillomavirus; Dyoxipapillomavirus 2

Average proteome isoelectric point is 6.66

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 7 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1B2K234|A0A1B2K234_9PAPI Regulatory protein E2 OS=Bos taurus papillomavirus 19 OX=1887217 GN=E2 PE=3 SV=1
MM1 pKa = 7.08TLRR4 pKa = 11.84RR5 pKa = 11.84RR6 pKa = 11.84KK7 pKa = 9.59RR8 pKa = 11.84DD9 pKa = 3.18SAEE12 pKa = 3.83NLWRR16 pKa = 11.84HH17 pKa = 5.31CQATGAEE24 pKa = 4.51CPPDD28 pKa = 4.03VINKK32 pKa = 6.84YY33 pKa = 8.0TEE35 pKa = 3.6NTLADD40 pKa = 3.99RR41 pKa = 11.84LSKK44 pKa = 10.5IFASILYY51 pKa = 10.15LGGLAIGTGKK61 pKa = 10.87GSGGNLGYY69 pKa = 10.38RR70 pKa = 11.84PLGEE74 pKa = 3.98PVGPPRR80 pKa = 11.84VGPGGTVIRR89 pKa = 11.84PNVVVDD95 pKa = 3.85AVGPADD101 pKa = 6.23LIPLDD106 pKa = 4.13SLNPDD111 pKa = 3.24SSVIPLLRR119 pKa = 11.84GTPEE123 pKa = 3.8GSEE126 pKa = 4.23VGLEE130 pKa = 4.14TPDD133 pKa = 3.36ILGEE137 pKa = 4.15SDD139 pKa = 3.49PASDD143 pKa = 3.79VTITTGNTVTLGEE156 pKa = 4.39DD157 pKa = 3.35TPAILEE163 pKa = 4.23VTPVQPEE170 pKa = 3.97EE171 pKa = 4.36AVPPPAKK178 pKa = 9.9RR179 pKa = 11.84PRR181 pKa = 11.84VSAQEE186 pKa = 4.09FLNATYY192 pKa = 10.46DD193 pKa = 3.5PSIFSTEE200 pKa = 3.96PVTLSTTGTASNSVTVDD217 pKa = 3.97FGLPSTEE224 pKa = 3.39IGQVFEE230 pKa = 4.91EE231 pKa = 4.42IEE233 pKa = 4.12LDD235 pKa = 3.37EE236 pKa = 4.37FTPLTRR242 pKa = 11.84SPQASTPADD251 pKa = 3.32EE252 pKa = 5.03SYY254 pKa = 11.79GLFSRR259 pKa = 11.84IRR261 pKa = 11.84EE262 pKa = 4.09FYY264 pKa = 10.03NRR266 pKa = 11.84RR267 pKa = 11.84IRR269 pKa = 11.84QVEE272 pKa = 3.97ITSPTFLRR280 pKa = 11.84RR281 pKa = 11.84PQAYY285 pKa = 8.51IDD287 pKa = 3.55FAYY290 pKa = 10.29GVDD293 pKa = 4.18NPAFDD298 pKa = 5.06PDD300 pKa = 3.37VSRR303 pKa = 11.84EE304 pKa = 3.88FLEE307 pKa = 5.4DD308 pKa = 3.36LAEE311 pKa = 4.37LEE313 pKa = 4.53NVTAAPHH320 pKa = 6.83SDD322 pKa = 3.19FQDD325 pKa = 2.88IVRR328 pKa = 11.84LNRR331 pKa = 11.84QVFQEE336 pKa = 4.54GEE338 pKa = 4.09GGRR341 pKa = 11.84LRR343 pKa = 11.84VSRR346 pKa = 11.84IGNRR350 pKa = 11.84GTISTRR356 pKa = 11.84SGLLIGEE363 pKa = 4.19RR364 pKa = 11.84VHH366 pKa = 7.34FYY368 pKa = 11.06QDD370 pKa = 3.17LSSIQQSDD378 pKa = 4.48GIEE381 pKa = 3.97LAPLGSFTGEE391 pKa = 3.8ATVVTGTEE399 pKa = 3.34EE400 pKa = 4.17GAFVDD405 pKa = 4.33ASSSFDD411 pKa = 3.58YY412 pKa = 10.81EE413 pKa = 4.21GTGIEE418 pKa = 5.98DD419 pKa = 3.58VLLDD423 pKa = 3.58NYY425 pKa = 10.49EE426 pKa = 4.08EE427 pKa = 4.37SFEE430 pKa = 4.27RR431 pKa = 11.84SQLVIGTRR439 pKa = 11.84RR440 pKa = 11.84SSNIVPMDD448 pKa = 3.89FYY450 pKa = 10.81RR451 pKa = 11.84GEE453 pKa = 3.9IRR455 pKa = 11.84PFVQDD460 pKa = 3.37LTEE463 pKa = 3.84GWFYY467 pKa = 11.32GPPEE471 pKa = 4.42IGNDD475 pKa = 3.64EE476 pKa = 4.11NTPIYY481 pKa = 10.19IDD483 pKa = 3.78WSPLEE488 pKa = 4.35PGSRR492 pKa = 11.84GPDD495 pKa = 3.67LIINLYY501 pKa = 9.85GNDD504 pKa = 3.64YY505 pKa = 10.49SLHH508 pKa = 6.19PSYY511 pKa = 11.27LLRR514 pKa = 11.84RR515 pKa = 11.84RR516 pKa = 11.84RR517 pKa = 11.84KK518 pKa = 8.33RR519 pKa = 11.84KK520 pKa = 9.47RR521 pKa = 11.84FHH523 pKa = 6.41VLL525 pKa = 2.81

Molecular weight: 57.69 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1B2K268|A0A1B2K268_9PAPI Replication protein E1 OS=Bos taurus papillomavirus 19 OX=1887217 GN=E1 PE=3 SV=1
MM1 pKa = 7.54KK2 pKa = 8.68PTVIVCFFMGKK13 pKa = 8.57EE14 pKa = 4.18SRR16 pKa = 11.84CMPGIFGPGMVRR28 pKa = 11.84LEE30 pKa = 3.77KK31 pKa = 10.34RR32 pKa = 11.84YY33 pKa = 9.77LQMEE37 pKa = 4.51KK38 pKa = 10.86LGMTFSLVPLVALAKK53 pKa = 10.43ALIIILLVPVGQWLPQMLTYY73 pKa = 9.9LTGHH77 pKa = 6.81FGCNEE82 pKa = 3.64HH83 pKa = 6.85KK84 pKa = 10.58AIIMALLGEE93 pKa = 4.49ISYY96 pKa = 10.61LLQWLIIPATQTILL110 pKa = 3.46

Molecular weight: 12.35 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

7

0

7

2383

95

612

340.4

38.27

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.581 ± 0.349

2.266 ± 0.696

6.085 ± 0.633

6.504 ± 0.635

4.532 ± 0.588

7.134 ± 0.873

1.888 ± 0.253

4.826 ± 0.615

5.455 ± 1.105

9.987 ± 0.964

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.804 ± 0.497

4.154 ± 0.565

5.581 ± 0.76

3.777 ± 0.306

6.085 ± 1.03

7.512 ± 0.761

6.211 ± 0.304

5.917 ± 0.361

1.553 ± 0.301

3.147 ± 0.325
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski