Trichomonas vaginalis virus 4

Taxonomy: Viruses; Riboviria; Orthornavirae; Duplornaviricota; Chrymotiviricetes; Ghabrivirales; Totiviridae; Trichomonasvirus

Average proteome isoelectric point is 6.46

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    

Protein with the lowest isoelectric point:
>tr|F5B2U7|F5B2U7_9VIRU Capsid protein OS=Trichomonas vaginalis virus 4 OX=1008292 GN=cap PE=4 SV=1
MM1 pKa = 7.23SAIAATISSANLNDD15 pKa = 3.99LSRR18 pKa = 11.84LAGAQPKK25 pKa = 9.62EE26 pKa = 4.3GVPAPVLQQNIATPKK41 pKa = 9.49TGPPDD46 pKa = 4.05PGEE49 pKa = 4.23GTRR52 pKa = 11.84KK53 pKa = 8.1QTTDD57 pKa = 3.27SPHH60 pKa = 6.15SANPSTKK67 pKa = 9.08EE68 pKa = 3.65HH69 pKa = 6.28TPAPTIQPDD78 pKa = 4.02TPTPITDD85 pKa = 3.5HH86 pKa = 6.94SDD88 pKa = 3.4SEE90 pKa = 4.45EE91 pKa = 4.29GPRR94 pKa = 11.84THH96 pKa = 6.45STDD99 pKa = 3.35FQTLYY104 pKa = 10.64EE105 pKa = 4.26YY106 pKa = 10.32FYY108 pKa = 10.42SYY110 pKa = 10.38PVPASQTRR118 pKa = 11.84TGGAIARR125 pKa = 11.84AGPVNDD131 pKa = 3.51NNEE134 pKa = 4.31VVSFTTEE141 pKa = 3.68TALVTSLTPKK151 pKa = 10.48HH152 pKa = 6.32IDD154 pKa = 3.41ANIQPLQISIADD166 pKa = 3.5DD167 pKa = 3.68CVNYY171 pKa = 10.14SCQYY175 pKa = 10.63SGQTCPIFDD184 pKa = 4.37GSQHH188 pKa = 5.14VQSATALASSMKK200 pKa = 10.04ARR202 pKa = 11.84LMCEE206 pKa = 4.07VTQSLSARR214 pKa = 11.84PVQQPQLIAYY224 pKa = 9.26LYY226 pKa = 10.24GALLAFGDD234 pKa = 4.55RR235 pKa = 11.84LNIHH239 pKa = 6.43YY240 pKa = 10.2GNKK243 pKa = 8.68VNLWNALLGHH253 pKa = 6.41NLQRR257 pKa = 11.84GTPINGDD264 pKa = 3.45NFNHH268 pKa = 6.75HH269 pKa = 6.74LLIDD273 pKa = 4.43GPLAPPILPAAGLGPFPSTTLGPNTTVTFKK303 pKa = 10.9ARR305 pKa = 11.84ASIFVRR311 pKa = 11.84PQTYY315 pKa = 10.32DD316 pKa = 3.28YY317 pKa = 11.29ALVDD321 pKa = 3.37AAFWLIYY328 pKa = 10.99AMYY331 pKa = 10.7SRR333 pKa = 11.84MPVAFRR339 pKa = 11.84QAHH342 pKa = 5.4SLNIDD347 pKa = 4.35FFTVQPMAACVFPGHH362 pKa = 7.25DD363 pKa = 3.62GFTTPVIDD371 pKa = 3.47QALGVLEE378 pKa = 4.21SMLVEE383 pKa = 4.33MFNGDD388 pKa = 3.92RR389 pKa = 11.84EE390 pKa = 4.08IMYY393 pKa = 10.42YY394 pKa = 10.29YY395 pKa = 10.6AFKK398 pKa = 10.67GGQIFMRR405 pKa = 11.84PCSCYY410 pKa = 10.13QEE412 pKa = 4.78GGLIRR417 pKa = 11.84KK418 pKa = 9.32ASRR421 pKa = 11.84NVSLASFTGIYY432 pKa = 10.4SLIGYY437 pKa = 7.6CAPEE441 pKa = 4.22ARR443 pKa = 11.84PLHH446 pKa = 6.1AANHH450 pKa = 6.05PGIIAALFQYY460 pKa = 10.36VDD462 pKa = 3.64TMVLQAVLSYY472 pKa = 10.8SGPKK476 pKa = 9.52LVHH479 pKa = 6.62FGAAPEE485 pKa = 4.25FCSKK489 pKa = 10.9GSTPYY494 pKa = 11.26DD495 pKa = 4.12FIDD498 pKa = 4.31PDD500 pKa = 3.97NYY502 pKa = 8.86WGIRR506 pKa = 11.84AGVNAHH512 pKa = 7.03PIGYY516 pKa = 9.25YY517 pKa = 10.38YY518 pKa = 11.09LDD520 pKa = 2.88ILMRR524 pKa = 11.84PKK526 pKa = 10.12EE527 pKa = 4.06HH528 pKa = 6.58QLLDD532 pKa = 3.54EE533 pKa = 4.56TLSDD537 pKa = 3.31IYY539 pKa = 11.59GHH541 pKa = 6.03VGSLAMANIMASIASSGTEE560 pKa = 3.63VLNQKK565 pKa = 7.11MQKK568 pKa = 9.96SFVRR572 pKa = 11.84RR573 pKa = 11.84GNQVRR578 pKa = 11.84ALRR581 pKa = 11.84HH582 pKa = 4.08SHH584 pKa = 6.78AIINRR589 pKa = 11.84FHH591 pKa = 6.51EE592 pKa = 4.14PEE594 pKa = 3.61YY595 pKa = 10.65AYY597 pKa = 10.91RR598 pKa = 11.84LGILADD604 pKa = 4.75GIIPLAGTHH613 pKa = 6.14KK614 pKa = 10.66CDD616 pKa = 5.01IIDD619 pKa = 3.56EE620 pKa = 4.4ATRR623 pKa = 11.84LLQGEE628 pKa = 5.13DD629 pKa = 3.0IRR631 pKa = 11.84NLPGLRR637 pKa = 11.84CLRR640 pKa = 11.84GRR642 pKa = 11.84GLDD645 pKa = 3.62AIIGIRR651 pKa = 11.84PINKK655 pKa = 8.63KK656 pKa = 9.93RR657 pKa = 11.84RR658 pKa = 11.84AGFYY662 pKa = 9.33TLDD665 pKa = 3.73GNFHH669 pKa = 6.32VVTNQCTSDD678 pKa = 4.07VLQVWNDD685 pKa = 3.1HH686 pKa = 6.05GYY688 pKa = 9.43IARR691 pKa = 11.84PYY693 pKa = 8.38ACHH696 pKa = 6.11IVEE699 pKa = 4.77SINVEE704 pKa = 3.51IYY706 pKa = 10.48DD707 pKa = 4.23RR708 pKa = 11.84SNGAYY713 pKa = 10.12NGWIQALVSGFGVPEE728 pKa = 3.91RR729 pKa = 11.84CYY731 pKa = 9.94MGPRR735 pKa = 11.84LQVAGGAPSALL746 pKa = 3.66

Molecular weight:
81.5 kDa
Isoelectric point according different methods:






Protein with the highest isoelectric point:
>tr|F5B2U7|F5B2U7_9VIRU Capsid protein OS=Trichomonas vaginalis virus 4 OX=1008292 GN=cap PE=4 SV=1
MM1 pKa = 7.23SAIAATISSANLNDD15 pKa = 3.99LSRR18 pKa = 11.84LAGAQPKK25 pKa = 9.62EE26 pKa = 4.3GVPAPVLQQNIATPKK41 pKa = 9.49TGPPDD46 pKa = 4.05PGEE49 pKa = 4.23GTRR52 pKa = 11.84KK53 pKa = 8.1QTTDD57 pKa = 3.27SPHH60 pKa = 6.15SANPSTKK67 pKa = 9.08EE68 pKa = 3.65HH69 pKa = 6.28TPAPTIQPDD78 pKa = 4.02TPTPITDD85 pKa = 3.5HH86 pKa = 6.94SDD88 pKa = 3.4SEE90 pKa = 4.45EE91 pKa = 4.29GPRR94 pKa = 11.84THH96 pKa = 6.45STDD99 pKa = 3.35FQTLYY104 pKa = 10.64EE105 pKa = 4.26YY106 pKa = 10.32FYY108 pKa = 10.42SYY110 pKa = 10.38PVPASQTRR118 pKa = 11.84TGGAIARR125 pKa = 11.84AGPVNDD131 pKa = 3.51NNEE134 pKa = 4.31VVSFTTEE141 pKa = 3.68TALVTSLTPKK151 pKa = 10.48HH152 pKa = 6.32IDD154 pKa = 3.41ANIQPLQISIADD166 pKa = 3.5DD167 pKa = 3.68CVNYY171 pKa = 10.14SCQYY175 pKa = 10.63SGQTCPIFDD184 pKa = 4.37GSQHH188 pKa = 5.14VQSATALASSMKK200 pKa = 10.04ARR202 pKa = 11.84LMCEE206 pKa = 4.07VTQSLSARR214 pKa = 11.84PVQQPQLIAYY224 pKa = 9.26LYY226 pKa = 10.24GALLAFGDD234 pKa = 4.55RR235 pKa = 11.84LNIHH239 pKa = 6.43YY240 pKa = 10.2GNKK243 pKa = 8.68VNLWNALLGHH253 pKa = 6.41NLQRR257 pKa = 11.84GTPINGDD264 pKa = 3.45NFNHH268 pKa = 6.75HH269 pKa = 6.74LLIDD273 pKa = 4.43GPLAPPILPAAGLGPFPSTTLGPNTTVTFKK303 pKa = 10.9ARR305 pKa = 11.84ASIFVRR311 pKa = 11.84PQTYY315 pKa = 10.32DD316 pKa = 3.28YY317 pKa = 11.29ALVDD321 pKa = 3.37AAFWLIYY328 pKa = 10.99AMYY331 pKa = 10.7SRR333 pKa = 11.84MPVAFRR339 pKa = 11.84QAHH342 pKa = 5.4SLNIDD347 pKa = 4.35FFTVQPMAACVFPGHH362 pKa = 7.25DD363 pKa = 3.62GFTTPVIDD371 pKa = 3.47QALGVLEE378 pKa = 4.21SMLVEE383 pKa = 4.33MFNGDD388 pKa = 3.92RR389 pKa = 11.84EE390 pKa = 4.08IMYY393 pKa = 10.42YY394 pKa = 10.29YY395 pKa = 10.6AFKK398 pKa = 10.67GGQIFMRR405 pKa = 11.84PCSCYY410 pKa = 10.13QEE412 pKa = 4.78GGLIRR417 pKa = 11.84KK418 pKa = 9.32ASRR421 pKa = 11.84NVSLASFTGIYY432 pKa = 10.4SLIGYY437 pKa = 7.6CAPEE441 pKa = 4.22ARR443 pKa = 11.84PLHH446 pKa = 6.1AANHH450 pKa = 6.05PGIIAALFQYY460 pKa = 10.36VDD462 pKa = 3.64TMVLQAVLSYY472 pKa = 10.8SGPKK476 pKa = 9.52LVHH479 pKa = 6.62FGAAPEE485 pKa = 4.25FCSKK489 pKa = 10.9GSTPYY494 pKa = 11.26DD495 pKa = 4.12FIDD498 pKa = 4.31PDD500 pKa = 3.97NYY502 pKa = 8.86WGIRR506 pKa = 11.84AGVNAHH512 pKa = 7.03PIGYY516 pKa = 9.25YY517 pKa = 10.38YY518 pKa = 11.09LDD520 pKa = 2.88ILMRR524 pKa = 11.84PKK526 pKa = 10.12EE527 pKa = 4.06HH528 pKa = 6.58QLLDD532 pKa = 3.54EE533 pKa = 4.56TLSDD537 pKa = 3.31IYY539 pKa = 11.59GHH541 pKa = 6.03VGSLAMANIMASIASSGTEE560 pKa = 3.63VLNQKK565 pKa = 7.11MQKK568 pKa = 9.96SFVRR572 pKa = 11.84RR573 pKa = 11.84GNQVRR578 pKa = 11.84ALRR581 pKa = 11.84HH582 pKa = 4.08SHH584 pKa = 6.78AIINRR589 pKa = 11.84FHH591 pKa = 6.51EE592 pKa = 4.14PEE594 pKa = 3.61YY595 pKa = 10.65AYY597 pKa = 10.91RR598 pKa = 11.84LGILADD604 pKa = 4.75GIIPLAGTHH613 pKa = 6.14KK614 pKa = 10.66CDD616 pKa = 5.01IIDD619 pKa = 3.56EE620 pKa = 4.4ATRR623 pKa = 11.84LLQGEE628 pKa = 5.13DD629 pKa = 3.0IRR631 pKa = 11.84NLPGLRR637 pKa = 11.84CLRR640 pKa = 11.84GRR642 pKa = 11.84GLDD645 pKa = 3.62AIIGIRR651 pKa = 11.84PINKK655 pKa = 8.63KK656 pKa = 9.93RR657 pKa = 11.84RR658 pKa = 11.84AGFYY662 pKa = 9.33TLDD665 pKa = 3.73GNFHH669 pKa = 6.32VVTNQCTSDD678 pKa = 4.07VLQVWNDD685 pKa = 3.1HH686 pKa = 6.05GYY688 pKa = 9.43IARR691 pKa = 11.84PYY693 pKa = 8.38ACHH696 pKa = 6.11IVEE699 pKa = 4.77SINVEE704 pKa = 3.51IYY706 pKa = 10.48DD707 pKa = 4.23RR708 pKa = 11.84SNGAYY713 pKa = 10.12NGWIQALVSGFGVPEE728 pKa = 3.95RR729 pKa = 11.84CYY731 pKa = 10.01MGPSSAGSRR740 pKa = 11.84RR741 pKa = 11.84RR742 pKa = 11.84PLCPLKK748 pKa = 10.9GSNCAVALHH757 pKa = 6.5VDD759 pKa = 3.92GQLTRR764 pKa = 11.84ASRR767 pKa = 11.84VPYY770 pKa = 10.26RR771 pKa = 11.84KK772 pKa = 8.41LTPSHH777 pKa = 6.57LNCSKK782 pKa = 10.67RR783 pKa = 11.84CARR786 pKa = 11.84QLAVIYY792 pKa = 9.8RR793 pKa = 11.84YY794 pKa = 7.97QTLSPQLTEE803 pKa = 4.65VSDD806 pKa = 3.69SDD808 pKa = 3.76YY809 pKa = 11.31LAFLRR814 pKa = 11.84WVLLPYY820 pKa = 10.07TGATNRR826 pKa = 11.84PHH828 pKa = 7.16PKK830 pKa = 9.26RR831 pKa = 11.84WPKK834 pKa = 9.9PFYY837 pKa = 9.72PAEE840 pKa = 4.06VSLKK844 pKa = 10.52FLDD847 pKa = 4.83KK848 pKa = 10.33KK849 pKa = 9.6TEE851 pKa = 3.97LQLFPLKK858 pKa = 10.33KK859 pKa = 10.44APQADD864 pKa = 3.61LKK866 pKa = 10.98VNCFARR872 pKa = 11.84NLLYY876 pKa = 10.64SSPLSDD882 pKa = 5.84RR883 pKa = 11.84ILKK886 pKa = 9.41QCIPVGTNNDD896 pKa = 4.0TVCGLVILLEE906 pKa = 4.29LLFEE910 pKa = 5.23AGVPLDD916 pKa = 4.25LLPTISVAIAKK927 pKa = 9.67NDD929 pKa = 3.75PFVKK933 pKa = 10.45ALSDD937 pKa = 3.81FNKK940 pKa = 8.05MTGATTSHH948 pKa = 7.01IANLLTEE955 pKa = 4.38CTTLLGRR962 pKa = 11.84GVTASAPNADD972 pKa = 4.23LYY974 pKa = 11.38HH975 pKa = 6.52RR976 pKa = 11.84VAPEE980 pKa = 4.07GNRR983 pKa = 11.84HH984 pKa = 5.02EE985 pKa = 5.29AKK987 pKa = 10.44ISDD990 pKa = 3.92DD991 pKa = 3.67VLRR994 pKa = 11.84SAIRR998 pKa = 11.84TIYY1001 pKa = 9.38KK1002 pKa = 9.77QEE1004 pKa = 4.1IKK1006 pKa = 10.46DD1007 pKa = 3.86CPKK1010 pKa = 10.34PGDD1013 pKa = 3.74FGLHH1017 pKa = 6.5LLTSPFWCKK1026 pKa = 10.31SGSHH1030 pKa = 6.32HH1031 pKa = 6.84HH1032 pKa = 6.34PQFPRR1037 pKa = 11.84YY1038 pKa = 8.93RR1039 pKa = 11.84NRR1041 pKa = 11.84LEE1043 pKa = 4.47FVMNTDD1049 pKa = 3.82PSAIMAVKK1057 pKa = 9.24PSVYY1061 pKa = 8.79ITQAQKK1067 pKa = 11.03LEE1069 pKa = 4.22HH1070 pKa = 6.43GKK1072 pKa = 7.86TRR1074 pKa = 11.84YY1075 pKa = 9.23IYY1077 pKa = 10.63NCDD1080 pKa = 3.39TVSYY1084 pKa = 10.46LYY1086 pKa = 10.47FDD1088 pKa = 4.73YY1089 pKa = 10.79ILNYY1093 pKa = 9.94VEE1095 pKa = 5.65SIWANSHH1102 pKa = 5.91VLLNPDD1108 pKa = 3.65ALNAEE1113 pKa = 4.35KK1114 pKa = 10.08FATLEE1119 pKa = 3.76YY1120 pKa = 10.73SEE1122 pKa = 5.08YY1123 pKa = 11.42CMIDD1127 pKa = 3.17YY1128 pKa = 10.72TDD1130 pKa = 4.84FNSQHH1135 pKa = 6.34TLTSMKK1141 pKa = 10.63AVFEE1145 pKa = 4.16VLKK1148 pKa = 10.54EE1149 pKa = 3.92FLPSEE1154 pKa = 4.3MFPVLDD1160 pKa = 3.49WCISSFDD1167 pKa = 3.52NMTIKK1172 pKa = 10.66DD1173 pKa = 3.95MKK1175 pKa = 9.7WRR1177 pKa = 11.84STLPSGHH1184 pKa = 7.18RR1185 pKa = 11.84ATTFINSVLNRR1196 pKa = 11.84AYY1198 pKa = 10.57LLPYY1202 pKa = 9.47IGTIVSYY1209 pKa = 10.79HH1210 pKa = 6.69CGDD1213 pKa = 4.02DD1214 pKa = 3.53VLLCGEE1220 pKa = 5.14HH1221 pKa = 7.66DD1222 pKa = 4.12YY1223 pKa = 11.44QHH1225 pKa = 7.39LITRR1229 pKa = 11.84LPYY1232 pKa = 9.87EE1233 pKa = 4.65LNPSKK1238 pKa = 10.86QSFGPHH1244 pKa = 6.07AEE1246 pKa = 3.77FLRR1249 pKa = 11.84LHH1251 pKa = 5.77RR1252 pKa = 11.84HH1253 pKa = 4.49GEE1255 pKa = 4.09KK1256 pKa = 10.66VIGYY1260 pKa = 5.44PTRR1263 pKa = 11.84AVSSLVSGNWLSTTSWNWQPSLLSITNQINAIICRR1298 pKa = 11.84SQLSISRR1305 pKa = 11.84IRR1307 pKa = 11.84SLAQEE1312 pKa = 3.97LRR1314 pKa = 11.84FRR1316 pKa = 11.84YY1317 pKa = 9.88CPLLDD1322 pKa = 4.18NYY1324 pKa = 9.91IDD1326 pKa = 4.1PATTSFVAAGCPSYY1340 pKa = 11.11QPTATMITPDD1350 pKa = 3.94VPHH1353 pKa = 7.19LDD1355 pKa = 3.48AEE1357 pKa = 4.52EE1358 pKa = 4.49VEE1360 pKa = 4.8FTQLHH1365 pKa = 5.14QLAEE1369 pKa = 4.35YY1370 pKa = 10.2AINTYY1375 pKa = 9.55PWLNSVEE1382 pKa = 4.5SVNQLVRR1389 pKa = 11.84SRR1391 pKa = 11.84MRR1393 pKa = 11.84KK1394 pKa = 7.58PAARR1398 pKa = 11.84DD1399 pKa = 2.9IHH1401 pKa = 7.36YY1402 pKa = 10.58SVLGPAIPLVSYY1414 pKa = 9.94HH1415 pKa = 5.75HH1416 pKa = 7.13HH1417 pKa = 7.37CDD1419 pKa = 3.41PMVVPLTRR1427 pKa = 11.84RR1428 pKa = 11.84YY1429 pKa = 10.02YY1430 pKa = 10.18PRR1432 pKa = 11.84DD1433 pKa = 3.28HH1434 pKa = 7.22LAPPITPQVLPPQPVFCDD1452 pKa = 3.54RR1453 pKa = 11.84DD1454 pKa = 3.58LSPIMALKK1462 pKa = 10.06IAPAGVAVKK1471 pKa = 8.66VTADD1475 pKa = 3.78RR1476 pKa = 11.84PIASAA1481 pKa = 3.89

Molecular weight:
164.68 kDa
Isoelectric point according different methods:






Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

2227

746

1481

1113.5

123.09

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.936 ± 0.464

2.155 ± 0.152

4.984 ± 0.013

3.502 ± 0.083

3.682 ± 0.039

6.466 ± 0.862

3.458 ± 0.058

6.331 ± 0.276

3.098 ± 0.375

9.295 ± 0.538

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.976 ± 0.092

4.67 ± 0.085

7.454 ± 0.118

4.176 ± 0.282

5.344 ± 0.136

7.05 ± 0.263

6.152 ± 0.065

5.658 ± 0.162

0.898 ± 0.124

4.715 ± 0.013

Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski