Sanxia tombus-like virus 9

Taxonomy: Viruses; Riboviria; unclassified Riboviria; unclassified RNA viruses ShiM-2016

Average proteome isoelectric point is 8.24

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1L3KGB8|A0A1L3KGB8_9VIRU Uncharacterized protein OS=Sanxia tombus-like virus 9 OX=1923393 PE=4 SV=1
MM1 pKa = 7.79LSRR4 pKa = 11.84LHH6 pKa = 6.34VCFHH10 pKa = 6.05HH11 pKa = 7.42RR12 pKa = 11.84GRR14 pKa = 11.84QLLPPLCSLVPMVPAAHH31 pKa = 6.54VDD33 pKa = 3.63NVVSSIEE40 pKa = 3.78LRR42 pKa = 11.84VARR45 pKa = 11.84EE46 pKa = 3.86VPRR49 pKa = 11.84PHH51 pKa = 7.32PLVCAPKK58 pKa = 10.45LRR60 pKa = 11.84GKK62 pKa = 9.92LRR64 pKa = 11.84PYY66 pKa = 10.19LLHH69 pKa = 6.95PAPLVPTPLAMPLSPPRR86 pKa = 11.84KK87 pKa = 8.44VPPRR91 pKa = 11.84KK92 pKa = 8.64PQHH95 pKa = 6.53LSSQLWEE102 pKa = 4.21KK103 pKa = 10.29VQAAVNPEE111 pKa = 4.06LVLATTANATDD122 pKa = 3.63TSLPTAAADD131 pKa = 3.58HH132 pKa = 6.59RR133 pKa = 11.84LDD135 pKa = 4.02PSSQAVHH142 pKa = 6.86PCRR145 pKa = 11.84NPEE148 pKa = 3.91NCSLLLFPGVPKK160 pKa = 10.42SDD162 pKa = 3.27PHH164 pKa = 7.99GPEE167 pKa = 3.79SLAMVQKK174 pKa = 11.03AMGMVPEE181 pKa = 4.54SRR183 pKa = 11.84TEE185 pKa = 3.9NLQQLADD192 pKa = 4.09EE193 pKa = 4.5YY194 pKa = 10.79RR195 pKa = 11.84ANHH198 pKa = 6.83LLPVLGRR205 pKa = 11.84VHH207 pKa = 7.08PLPWEE212 pKa = 3.74EE213 pKa = 3.51WLQRR217 pKa = 11.84FPSNRR222 pKa = 11.84SLQLNDD228 pKa = 3.15ARR230 pKa = 11.84SNVQLRR236 pKa = 11.84GLLKK240 pKa = 10.3SDD242 pKa = 4.03CKK244 pKa = 10.89VDD246 pKa = 3.69CFLKK250 pKa = 11.06VEE252 pKa = 4.36TSTNATDD259 pKa = 3.86PRR261 pKa = 11.84NISPRR266 pKa = 11.84SAEE269 pKa = 3.98FLSVLGPYY277 pKa = 9.49VAGLEE282 pKa = 4.16NKK284 pKa = 9.3IRR286 pKa = 11.84TLHH289 pKa = 6.66DD290 pKa = 3.75HH291 pKa = 6.95DD292 pKa = 4.65QIPYY296 pKa = 9.23LVKK299 pKa = 10.64GLTPSARR306 pKa = 11.84AQIVRR311 pKa = 11.84RR312 pKa = 11.84KK313 pKa = 7.88EE314 pKa = 3.83RR315 pKa = 11.84AWVVEE320 pKa = 3.85IDD322 pKa = 3.43YY323 pKa = 11.06SRR325 pKa = 11.84YY326 pKa = 11.07DD327 pKa = 3.31MTISEE332 pKa = 4.2DD333 pKa = 3.62VIRR336 pKa = 11.84EE337 pKa = 4.03LEE339 pKa = 4.04IKK341 pKa = 10.16NFKK344 pKa = 10.69ALFVSDD350 pKa = 4.58EE351 pKa = 4.4DD352 pKa = 4.1PALDD356 pKa = 3.79AVLDD360 pKa = 4.23ALISMNGYY368 pKa = 9.72NSLGVKK374 pKa = 8.64YY375 pKa = 8.77TVDD378 pKa = 3.43GTRR381 pKa = 11.84ASGDD385 pKa = 2.95AHH387 pKa = 5.71TSIGNGLLGRR397 pKa = 11.84FLLWVCLRR405 pKa = 11.84GLPDD409 pKa = 3.75TVWDD413 pKa = 4.21SVHH416 pKa = 6.61EE417 pKa = 4.52GDD419 pKa = 5.97DD420 pKa = 3.52GLLFVDD426 pKa = 5.8DD427 pKa = 4.61GWQHH431 pKa = 6.84LVMHH435 pKa = 7.05CLQVLPCFGFQAKK448 pKa = 9.66LRR450 pKa = 11.84LCRR453 pKa = 11.84LDD455 pKa = 4.93DD456 pKa = 4.1ALFCGRR462 pKa = 11.84LNVNTSNGAIEE473 pKa = 4.24IADD476 pKa = 3.69IPRR479 pKa = 11.84TLGKK483 pKa = 10.21FHH485 pKa = 6.92TSCKK489 pKa = 9.83TGDD492 pKa = 3.54ARR494 pKa = 11.84TLALAKK500 pKa = 10.35AFSYY504 pKa = 10.78YY505 pKa = 9.38HH506 pKa = 6.69TDD508 pKa = 2.88RR509 pKa = 11.84DD510 pKa = 4.1TPIIGPLCWALIQHH524 pKa = 6.64LRR526 pKa = 11.84PLVSPRR532 pKa = 11.84AFTRR536 pKa = 11.84RR537 pKa = 11.84INTEE541 pKa = 2.94KK542 pKa = 9.78WFEE545 pKa = 4.04RR546 pKa = 11.84EE547 pKa = 3.88KK548 pKa = 10.74IEE550 pKa = 5.64AGMKK554 pKa = 7.9VQRR557 pKa = 11.84PPRR560 pKa = 11.84ITPEE564 pKa = 3.02ARR566 pKa = 11.84AAVDD570 pKa = 3.33RR571 pKa = 11.84VFDD574 pKa = 3.55VGYY577 pKa = 10.67GSQLVLEE584 pKa = 4.79KK585 pKa = 10.64QLSSWASGVSEE596 pKa = 4.56VPPLILTGEE605 pKa = 4.32EE606 pKa = 4.54VVDD609 pKa = 3.57HH610 pKa = 6.69TDD612 pKa = 3.06GVKK615 pKa = 9.55TVTVYY620 pKa = 11.17AA621 pKa = 4.5

Molecular weight: 69.14 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1L3KGI7|A0A1L3KGI7_9VIRU Chropara_Vmeth domain-containing protein OS=Sanxia tombus-like virus 9 OX=1923393 PE=4 SV=1
MM1 pKa = 6.89VAWLPVVIGFAITALMAPRR20 pKa = 11.84IEE22 pKa = 4.58EE23 pKa = 4.0DD24 pKa = 2.98LSYY27 pKa = 11.16YY28 pKa = 10.55EE29 pKa = 4.85SLGAPGWRR37 pKa = 11.84TVDD40 pKa = 3.1AYY42 pKa = 11.47LPILKK47 pKa = 10.23YY48 pKa = 10.68LDD50 pKa = 4.27LVPSPEE56 pKa = 3.79RR57 pKa = 11.84LEE59 pKa = 4.43RR60 pKa = 11.84LRR62 pKa = 11.84LDD64 pKa = 3.48CAIIQGEE71 pKa = 4.0IHH73 pKa = 5.9EE74 pKa = 4.48WEE76 pKa = 3.5WWAEE80 pKa = 3.95YY81 pKa = 10.02FPTMAGEE88 pKa = 4.5RR89 pKa = 11.84PALPYY94 pKa = 9.83RR95 pKa = 11.84CSYY98 pKa = 9.35FVWNRR103 pKa = 11.84TAKK106 pKa = 10.06PAVTSRR112 pKa = 11.84LDD114 pKa = 3.81LLMSAYY120 pKa = 9.17ATIAKK125 pKa = 9.98GLLFLGAWVWINVALIVLAFICCLLAGVLLVVKK158 pKa = 10.29VYY160 pKa = 8.38LTYY163 pKa = 10.43YY164 pKa = 9.3RR165 pKa = 11.84GVRR168 pKa = 11.84VRR170 pKa = 11.84APTPVLGKK178 pKa = 10.52NEE180 pKa = 3.94VRR182 pKa = 11.84DD183 pKa = 3.81LLAVEE188 pKa = 4.83LSKK191 pKa = 10.16TPIDD195 pKa = 4.74KK196 pKa = 10.53IQLLADD202 pKa = 4.35GKK204 pKa = 9.91GHH206 pKa = 6.87PVLAKK211 pKa = 9.84TRR213 pKa = 11.84ATLEE217 pKa = 4.23TACQQVLLRR226 pKa = 11.84MNNKK230 pKa = 8.94IRR232 pKa = 11.84DD233 pKa = 3.72VGGSVSRR240 pKa = 11.84NQKK243 pKa = 9.62LGKK246 pKa = 9.34SLHH249 pKa = 5.63VCFPVLTAADD259 pKa = 4.0RR260 pKa = 11.84ARR262 pKa = 11.84VNRR265 pKa = 11.84ALANDD270 pKa = 3.52VGFHH274 pKa = 6.89LGHH277 pKa = 6.37EE278 pKa = 4.75CDD280 pKa = 3.67VKK282 pKa = 11.01HH283 pKa = 6.47IPTYY287 pKa = 9.77MSYY290 pKa = 10.86TDD292 pKa = 3.64FHH294 pKa = 6.94MPLDD298 pKa = 3.65MLVRR302 pKa = 11.84TVTSPTLIITHH313 pKa = 6.78DD314 pKa = 4.07FRR316 pKa = 11.84NMPAKK321 pKa = 10.62LFDD324 pKa = 3.89EE325 pKa = 4.65EE326 pKa = 4.37ATISVIGGLVNMTTRR341 pKa = 11.84GGSKK345 pKa = 8.78YY346 pKa = 7.0THH348 pKa = 7.27GYY350 pKa = 9.56HH351 pKa = 6.34SWDD354 pKa = 3.77DD355 pKa = 3.64EE356 pKa = 4.78GSVVTKK362 pKa = 10.65SGAFYY367 pKa = 8.01YY368 pKa = 10.63HH369 pKa = 6.96KK370 pKa = 10.54VAEE373 pKa = 4.77LGDD376 pKa = 4.31SIVIYY381 pKa = 8.07ATPLNGDD388 pKa = 3.87HH389 pKa = 7.84DD390 pKa = 4.14PTQDD394 pKa = 3.5NEE396 pKa = 4.28LQSSVNCYY404 pKa = 9.59TGIKK408 pKa = 9.08YY409 pKa = 10.39RR410 pKa = 11.84GGRR413 pKa = 11.84AEE415 pKa = 4.1LHH417 pKa = 5.46NGEE420 pKa = 4.66YY421 pKa = 10.3IMRR424 pKa = 11.84DD425 pKa = 3.23DD426 pKa = 4.03QGNLRR431 pKa = 11.84GAVSARR437 pKa = 11.84TVSRR441 pKa = 11.84VAHH444 pKa = 5.42SFGYY448 pKa = 10.46AKK450 pKa = 10.12RR451 pKa = 11.84DD452 pKa = 3.47AKK454 pKa = 11.08FEE456 pKa = 4.15TGLAANLRR464 pKa = 11.84ARR466 pKa = 11.84FTQDD470 pKa = 3.69GEE472 pKa = 4.36DD473 pKa = 3.49HH474 pKa = 6.74SLLPEE479 pKa = 4.18ATNLTVALADD489 pKa = 5.4RR490 pKa = 11.84IALAADD496 pKa = 4.25MSAVSCPTEE505 pKa = 3.64MNFFQRR511 pKa = 11.84VMWNAYY517 pKa = 7.91FALVSVLPTSLQLARR532 pKa = 11.84TVRR535 pKa = 11.84QMLLQSEE542 pKa = 4.6HH543 pKa = 4.24VRR545 pKa = 11.84FRR547 pKa = 11.84KK548 pKa = 9.1WMWEE552 pKa = 3.87EE553 pKa = 3.59VHH555 pKa = 6.46IPNYY559 pKa = 10.21LVSTPGLVSLRR570 pKa = 11.84ADD572 pKa = 3.11AVKK575 pKa = 10.53ASRR578 pKa = 11.84LFPSPGAATAAPAVLACTNGAGCACGQCGQQHH610 pKa = 5.67RR611 pKa = 11.84TQGSSGSPAAASLSLRR627 pKa = 11.84PQTTRR632 pKa = 11.84QTTSLSPTPSPTSTNTTSNAPVPAKK657 pKa = 10.46KK658 pKa = 9.1GTASQAPAPQQPAVGKK674 pKa = 9.91GAGSGKK680 pKa = 10.33SRR682 pKa = 11.84IGPCNYY688 pKa = 9.51CKK690 pKa = 10.34RR691 pKa = 11.84HH692 pKa = 4.39GHH694 pKa = 6.15VIANCRR700 pKa = 11.84SRR702 pKa = 11.84PSAGSVKK709 pKa = 10.4PGGSPVQKK717 pKa = 10.02PGKK720 pKa = 8.46LQPAAVPGGAQVRR733 pKa = 11.84PSRR736 pKa = 11.84AGKK739 pKa = 9.25PSNGAKK745 pKa = 10.61GNGNGTRR752 pKa = 11.84KK753 pKa = 9.93QNGKK757 pKa = 8.73PAATRR762 pKa = 11.84GRR764 pKa = 11.84VQSKK768 pKa = 10.42SPAPGARR775 pKa = 11.84ARR777 pKa = 11.84PPPPVGRR784 pKa = 11.84VAAAVPVKK792 pKa = 10.25PFTPAQRR799 pKa = 11.84RR800 pKa = 11.84AQQCATSRR808 pKa = 11.84AVKK811 pKa = 10.08II812 pKa = 4.02

Molecular weight: 87.82 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3

0

3

1787

354

812

595.7

64.91

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

9.289 ± 1.294

1.903 ± 0.246

4.98 ± 0.736

3.693 ± 0.59

2.63 ± 0.094

7.219 ± 0.854

2.462 ± 0.53

3.078 ± 0.32

4.757 ± 0.425

9.905 ± 1.187

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.847 ± 0.109

3.693 ± 0.196

7.499 ± 0.326

3.637 ± 0.192

6.771 ± 0.458

7.163 ± 0.504

6.715 ± 0.899

8.842 ± 0.549

1.679 ± 0.141

2.238 ± 0.476
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski