Pineapple bacilliform CO virus
Average proteome isoelectric point is 6.94
Get precalculated fractions of proteins
Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
All
Note: above files contain also dissociation constants (pKa)
Virtual 2D-PAGE plot for 3 proteins (isoelectric point calculated using IPC2_protein)
Get csv file with sequences according to given criteria:
* You can choose from 21 different methods for calculating isoelectric point
Summary statistics related to proteome-wise predictions
Protein with the lowest isoelectric point:
>tr|E3SW31|E3SW31_9VIRU Reverse transcriptase OS=Pineapple bacilliform CO virus OX=2033633 PE=4 SV=1
MM1 pKa = 7.31 MNTTPRR7 pKa = 11.84 EE8 pKa = 4.05 VEE10 pKa = 3.88 QPLVEE15 pKa = 4.06 DD16 pKa = 4.25 QIWGYY21 pKa = 10.85 RR22 pKa = 11.84 WTQRR26 pKa = 11.84 ACYY29 pKa = 8.11 EE30 pKa = 3.85 AQEE33 pKa = 4.23 AGRR36 pKa = 11.84 RR37 pKa = 11.84 LANIGRR43 pKa = 11.84 TILGMQPRR51 pKa = 11.84 EE52 pKa = 3.89 HH53 pKa = 6.22 TLAMVIDD60 pKa = 4.72 PEE62 pKa = 5.69 AEE64 pKa = 4.12 LQRR67 pKa = 11.84 SMSEE71 pKa = 3.98 RR72 pKa = 11.84 ARR74 pKa = 11.84 TVPAEE79 pKa = 3.97 VLYY82 pKa = 7.4 MTRR85 pKa = 11.84 RR86 pKa = 11.84 DD87 pKa = 4.09 NIHH90 pKa = 5.95 HH91 pKa = 6.08 RR92 pKa = 11.84 VYY94 pKa = 11.01 YY95 pKa = 8.78 FRR97 pKa = 11.84 CEE99 pKa = 3.38 EE100 pKa = 3.89 RR101 pKa = 11.84 MRR103 pKa = 11.84 VLDD106 pKa = 4.39 SDD108 pKa = 3.66 QQDD111 pKa = 3.28 RR112 pKa = 11.84 TFITPEE118 pKa = 3.64 AFEE121 pKa = 4.36 HH122 pKa = 5.99 LKK124 pKa = 10.53 EE125 pKa = 4.39 AGFEE129 pKa = 4.19 YY130 pKa = 10.17 IHH132 pKa = 7.51 LGILQVRR139 pKa = 11.84 FQILHH144 pKa = 5.83 RR145 pKa = 11.84 RR146 pKa = 11.84 YY147 pKa = 9.38 AGTMAFIAYY156 pKa = 9.71 RR157 pKa = 11.84 DD158 pKa = 3.91 TRR160 pKa = 11.84 WDD162 pKa = 3.31 NRR164 pKa = 11.84 KK165 pKa = 10.25 SIIATMEE172 pKa = 3.69 VDD174 pKa = 3.76 LSEE177 pKa = 4.55 GNQIVYY183 pKa = 10.13 IIPDD187 pKa = 3.58 MMTTIRR193 pKa = 11.84 DD194 pKa = 4.13 CYY196 pKa = 10.08 EE197 pKa = 4.49 HH198 pKa = 7.3 IQISIRR204 pKa = 11.84 TIGYY208 pKa = 9.75 DD209 pKa = 3.58 DD210 pKa = 4.23 DD211 pKa = 4.46 WNGEE215 pKa = 4.27 SNLLITRR222 pKa = 11.84 GMTARR227 pKa = 11.84 LSNTPNVGFAYY238 pKa = 10.37 NISRR242 pKa = 11.84 VADD245 pKa = 3.57 YY246 pKa = 10.96 LKK248 pKa = 11.06 SKK250 pKa = 9.82 GVKK253 pKa = 10.29 AIDD256 pKa = 3.33 ASKK259 pKa = 11.11 EE260 pKa = 3.58 KK261 pKa = 8.33 TTQFKK266 pKa = 10.02 GRR268 pKa = 11.84 EE269 pKa = 4.08 WVLKK273 pKa = 9.78 PSQASVTPIMPTIADD288 pKa = 3.11 AHH290 pKa = 5.64 EE291 pKa = 5.0 RR292 pKa = 11.84 YY293 pKa = 10.13 DD294 pKa = 3.41 GSLGIKK300 pKa = 9.76 FGNYY304 pKa = 7.83 QEE306 pKa = 5.44 ASTSGPPQYY315 pKa = 10.55 NEE317 pKa = 3.97 HH318 pKa = 7.4 DD319 pKa = 3.96 DD320 pKa = 4.64 EE321 pKa = 4.88 IVEE324 pKa = 4.38 DD325 pKa = 4.03 VVLAIIDD332 pKa = 4.49 DD333 pKa = 4.05 LPEE336 pKa = 6.01 DD337 pKa = 4.13 DD338 pKa = 4.97 EE339 pKa = 4.91 EE340 pKa = 6.89 DD341 pKa = 3.78 YY342 pKa = 11.04 FQQILNDD349 pKa = 3.99 YY350 pKa = 10.52 QPDD353 pKa = 3.73 SQVALDD359 pKa = 4.15 YY360 pKa = 10.72 PVLIPTEE367 pKa = 4.48 DD368 pKa = 3.73 PFASSYY374 pKa = 11.79 APLTPPALTPLPASGDD390 pKa = 3.63 NTPDD394 pKa = 4.19 GIRR397 pKa = 11.84 PVLQRR402 pKa = 11.84 IVVGEE407 pKa = 3.85 KK408 pKa = 10.76 DD409 pKa = 3.35 FTDD412 pKa = 4.59 FNTLDD417 pKa = 3.4 FTLRR421 pKa = 11.84 GLDD424 pKa = 3.73 VEE426 pKa = 5.03 LQTTDD431 pKa = 3.8 DD432 pKa = 3.73 FTAEE436 pKa = 4.08 EE437 pKa = 4.46 EE438 pKa = 4.14 EE439 pKa = 5.23 LIGSFLNQLEE449 pKa = 4.38 EE450 pKa = 4.78 EE451 pKa = 4.28 EE452 pKa = 4.33 NLYY455 pKa = 10.95 CKK457 pKa = 10.27 EE458 pKa = 4.16 SPSCLFTDD466 pKa = 5.02 DD467 pKa = 5.3 NNGDD471 pKa = 3.97 DD472 pKa = 4.03 EE473 pKa = 5.27 GEE475 pKa = 4.19 HH476 pKa = 6.15 HH477 pKa = 7.17 VVAASLEE484 pKa = 4.21 YY485 pKa = 10.31 PEE487 pKa = 4.91 LRR489 pKa = 11.84 KK490 pKa = 9.82 ISEE493 pKa = 4.7 IINSTVVDD501 pKa = 4.46 SNPGNQYY508 pKa = 10.28 MIGDD512 pKa = 4.17 TDD514 pKa = 3.46 MDD516 pKa = 4.57 GPPGYY521 pKa = 10.88 APAQAQAAAVPPTYY535 pKa = 10.54 GGTSPSVRR543 pKa = 11.84 GPFRR547 pKa = 11.84 WKK549 pKa = 10.22 NPHH552 pKa = 5.29 EE553 pKa = 4.42 HH554 pKa = 6.74 FEE556 pKa = 4.48 LPSAHH561 pKa = 6.12 QLSGAIFVMPQNFDD575 pKa = 3.48 PKK577 pKa = 11.11 VFGRR581 pKa = 11.84 WEE583 pKa = 4.5 SIVLNHH589 pKa = 6.56 LADD592 pKa = 4.35 RR593 pKa = 11.84 NFPTALDD600 pKa = 3.73 KK601 pKa = 10.79 IIYY604 pKa = 9.42 VEE606 pKa = 3.97 NLLGEE611 pKa = 4.27 MEE613 pKa = 5.44 KK614 pKa = 9.06 ITFQTWRR621 pKa = 11.84 MRR623 pKa = 11.84 YY624 pKa = 7.95 EE625 pKa = 3.93 EE626 pKa = 4.74 EE627 pKa = 4.09 FVSLQTRR634 pKa = 11.84 VLGNNGTQNLLAQIRR649 pKa = 11.84 KK650 pKa = 8.99 VFFLEE655 pKa = 4.29 DD656 pKa = 3.81 PKK658 pKa = 11.45 GGTTVSQDD666 pKa = 3.09 AAYY669 pKa = 9.62 KK670 pKa = 10.1 AIKK673 pKa = 10.38 SLTCQEE679 pKa = 4.28 MSGQAIRR686 pKa = 11.84 KK687 pKa = 8.49 YY688 pKa = 8.47 MSSYY692 pKa = 10.47 FDD694 pKa = 3.42 LAARR698 pKa = 11.84 SGRR701 pKa = 11.84 MWVNEE706 pKa = 4.04 EE707 pKa = 4.27 LSDD710 pKa = 5.2 DD711 pKa = 4.37 FFTKK715 pKa = 10.73 LPMGLGDD722 pKa = 3.82 RR723 pKa = 11.84 VRR725 pKa = 11.84 QAFLSRR731 pKa = 11.84 YY732 pKa = 7.82 PGNTIGVPARR742 pKa = 11.84 ITFTQQYY749 pKa = 9.22 LEE751 pKa = 4.38 EE752 pKa = 4.37 VCRR755 pKa = 11.84 EE756 pKa = 3.74 AAYY759 pKa = 10.15 QRR761 pKa = 11.84 SLKK764 pKa = 9.76 TLDD767 pKa = 3.36 FCKK770 pKa = 10.3 EE771 pKa = 3.63 FPIPNFYY778 pKa = 10.61 KK779 pKa = 10.74 GPQKK783 pKa = 10.69 KK784 pKa = 10.07 YY785 pKa = 10.04 GVRR788 pKa = 11.84 KK789 pKa = 7.7 STTYY793 pKa = 9.94 RR794 pKa = 11.84 GKK796 pKa = 9.16 PHH798 pKa = 7.2 KK799 pKa = 10.47 SHH801 pKa = 6.84 IRR803 pKa = 11.84 IDD805 pKa = 3.64 KK806 pKa = 9.36 TKK808 pKa = 9.72 HH809 pKa = 4.82 LKK811 pKa = 9.18 NRR813 pKa = 11.84 KK814 pKa = 7.89 CKK816 pKa = 10.39 CYY818 pKa = 8.8 ICGEE822 pKa = 4.22 EE823 pKa = 3.98 GHH825 pKa = 6.54 FARR828 pKa = 11.84 DD829 pKa = 3.42 CKK831 pKa = 10.84 NPKK834 pKa = 9.96 KK835 pKa = 10.42 IVDD838 pKa = 3.72 RR839 pKa = 11.84 VHH841 pKa = 7.43 VLEE844 pKa = 5.06 EE845 pKa = 4.35 LDD847 pKa = 3.7 IQDD850 pKa = 3.49 GMDD853 pKa = 3.28 VVSVGEE859 pKa = 4.34 NEE861 pKa = 5.26 DD862 pKa = 4.0 EE863 pKa = 4.62 LSDD866 pKa = 3.53 IYY868 pKa = 11.2 SVSEE872 pKa = 4.26 GEE874 pKa = 4.28 EE875 pKa = 4.29 STHH878 pKa = 5.3 EE879 pKa = 4.24 AYY881 pKa = 10.23 HH882 pKa = 5.58 VFSLVEE888 pKa = 3.95 DD889 pKa = 4.17 CLIGKK894 pKa = 9.89 ANTWRR899 pKa = 11.84 YY900 pKa = 6.91 QVRR903 pKa = 11.84 VSPKK907 pKa = 9.44 EE908 pKa = 3.9 YY909 pKa = 9.37 YY910 pKa = 10.03 CKK912 pKa = 10.65 HH913 pKa = 4.72 EE914 pKa = 4.05 WGFNSKK920 pKa = 9.29 ILKK923 pKa = 9.36 NCRR926 pKa = 11.84 ACGATAQTGEE936 pKa = 4.63 RR937 pKa = 11.84 MDD939 pKa = 5.08 CPLCNMTICSSCSNYY954 pKa = 10.07 CFDD957 pKa = 3.17 ITIPKK962 pKa = 10.0 NEE964 pKa = 4.12 EE965 pKa = 3.44 RR966 pKa = 11.84 VQAIVSSSTASRR978 pKa = 11.84 EE979 pKa = 4.2 EE980 pKa = 3.8 SWKK983 pKa = 9.77 TIALEE988 pKa = 3.73 QRR990 pKa = 11.84 KK991 pKa = 9.32 LIKK994 pKa = 10.34 KK995 pKa = 10.13 LEE997 pKa = 4.07 NEE999 pKa = 3.91 KK1000 pKa = 10.54 EE1001 pKa = 4.0 ALIVEE1006 pKa = 4.73 LNQALEE1012 pKa = 3.98 QLKK1015 pKa = 7.76 QTKK1018 pKa = 10.18 GKK1020 pKa = 10.33 GIPEE1024 pKa = 4.43 HH1025 pKa = 6.78 QDD1027 pKa = 3.04 DD1028 pKa = 4.35 ALEE1031 pKa = 4.48 KK1032 pKa = 10.39 EE1033 pKa = 4.44 LLKK1036 pKa = 10.89 EE1037 pKa = 3.79 LLRR1040 pKa = 11.84 EE1041 pKa = 4.15 EE1042 pKa = 4.14 KK1043 pKa = 10.49 EE1044 pKa = 4.08 KK1045 pKa = 11.13 AKK1047 pKa = 10.52 KK1048 pKa = 10.44 AEE1050 pKa = 3.99 EE1051 pKa = 4.06 SLQEE1055 pKa = 3.84 LLKK1058 pKa = 10.87 EE1059 pKa = 4.31 EE1060 pKa = 4.12 KK1061 pKa = 10.25 EE1062 pKa = 4.18 KK1063 pKa = 11.18 AKK1065 pKa = 10.51 KK1066 pKa = 10.44 AEE1068 pKa = 3.99 EE1069 pKa = 4.06 SLQEE1073 pKa = 4.04 LLRR1076 pKa = 11.84 KK1077 pKa = 9.59 EE1078 pKa = 3.98 KK1079 pKa = 10.89 EE1080 pKa = 4.06 KK1081 pKa = 10.76 VRR1083 pKa = 11.84 KK1084 pKa = 9.93 AEE1086 pKa = 3.98 EE1087 pKa = 4.3 SQKK1090 pKa = 9.19 EE1091 pKa = 3.92 TALLVEE1097 pKa = 4.74 KK1098 pKa = 10.49 LQEE1101 pKa = 3.99 QLQQALSNKK1110 pKa = 6.04 TTCNEE1115 pKa = 3.81 EE1116 pKa = 3.65 VRR1118 pKa = 11.84 EE1119 pKa = 4.01 EE1120 pKa = 4.14 VAVITEE1126 pKa = 4.32 EE1127 pKa = 4.3 EE1128 pKa = 4.09 NLSYY1132 pKa = 10.93 SAIKK1136 pKa = 10.65 SPTRR1140 pKa = 11.84 YY1141 pKa = 9.88 NGLYY1145 pKa = 9.38 NLKK1148 pKa = 10.65 AKK1150 pKa = 10.41 IEE1152 pKa = 4.25 VEE1154 pKa = 4.06 GEE1156 pKa = 4.41 TVVLNAILDD1165 pKa = 3.98 TGATACIIQEE1175 pKa = 4.21 AKK1177 pKa = 10.85 VPDD1180 pKa = 4.22 RR1181 pKa = 11.84 PCEE1184 pKa = 3.83 QAAVSYY1190 pKa = 8.87 TLHH1193 pKa = 6.4 GVNSTTSGRR1202 pKa = 11.84 KK1203 pKa = 7.56 VLKK1206 pKa = 10.43 GGKK1209 pKa = 8.71 LWLGEE1214 pKa = 3.89 QFFRR1218 pKa = 11.84 LPRR1221 pKa = 11.84 TLVADD1226 pKa = 3.72 MVLTEE1231 pKa = 4.24 GVEE1234 pKa = 4.27 MIVGCNFLRR1243 pKa = 11.84 SLEE1246 pKa = 4.21 GGLRR1250 pKa = 11.84 IEE1252 pKa = 4.6 GEE1254 pKa = 4.08 VVTFYY1259 pKa = 11.75 KK1260 pKa = 10.72 LVTNVQSCRR1269 pKa = 11.84 STHH1272 pKa = 5.84 AFGAIIEE1279 pKa = 4.24 EE1280 pKa = 4.46 LEE1282 pKa = 4.13 MAEE1285 pKa = 5.8 DD1286 pKa = 4.39 EE1287 pKa = 4.89 YY1288 pKa = 11.19 IDD1290 pKa = 4.62 LNLMLATEE1298 pKa = 4.2 PAVGEE1303 pKa = 4.28 EE1304 pKa = 4.23 FAKK1307 pKa = 10.87 LPLYY1311 pKa = 10.07 QQLKK1315 pKa = 9.2 AEE1317 pKa = 4.42 GFIGEE1322 pKa = 4.47 NPLLHH1327 pKa = 6.02 WQRR1330 pKa = 11.84 NQVICEE1336 pKa = 4.02 LQIKK1340 pKa = 9.99 NPEE1343 pKa = 3.89 LTIEE1347 pKa = 4.25 DD1348 pKa = 4.15 RR1349 pKa = 11.84 PLKK1352 pKa = 10.53 HH1353 pKa = 5.34 VTPALKK1359 pKa = 10.19 EE1360 pKa = 3.88 AMQKK1364 pKa = 10.23 HH1365 pKa = 5.08 VDD1367 pKa = 3.43 KK1368 pKa = 11.11 LLEE1371 pKa = 4.31 LKK1373 pKa = 10.44 VIRR1376 pKa = 11.84 PSTSRR1381 pKa = 11.84 HH1382 pKa = 4.52 RR1383 pKa = 11.84 TTAMIVYY1390 pKa = 9.65 SGTEE1394 pKa = 3.66 VDD1396 pKa = 4.03 PVTKK1400 pKa = 10.13 KK1401 pKa = 10.27 EE1402 pKa = 3.95 KK1403 pKa = 9.89 RR1404 pKa = 11.84 GKK1406 pKa = 9.59 EE1407 pKa = 3.6 RR1408 pKa = 11.84 LVFNYY1413 pKa = 9.57 KK1414 pKa = 10.11 RR1415 pKa = 11.84 LNDD1418 pKa = 3.67 NTEE1421 pKa = 3.67 KK1422 pKa = 10.83 DD1423 pKa = 3.75 QYY1425 pKa = 10.37 SLPGISTILQKK1436 pKa = 10.31 IGHH1439 pKa = 5.66 SKK1441 pKa = 10.01 IYY1443 pKa = 10.8 SKK1445 pKa = 10.95 FDD1447 pKa = 3.66 PKK1449 pKa = 11.1 SGFHH1453 pKa = 5.31 QVAMHH1458 pKa = 7.2 PDD1460 pKa = 3.67 SVPWTAFWAINGLYY1474 pKa = 9.08 EE1475 pKa = 4.23 WLVMPFGLKK1484 pKa = 9.49 NAPAVFQRR1492 pKa = 11.84 KK1493 pKa = 7.86 MDD1495 pKa = 3.27 HH1496 pKa = 6.47 CFRR1499 pKa = 11.84 GTEE1502 pKa = 4.05 DD1503 pKa = 4.92 FIAVYY1508 pKa = 10.16 IDD1510 pKa = 4.95 DD1511 pKa = 3.91 ILVFSEE1517 pKa = 4.5 TPEE1520 pKa = 3.72 QHH1522 pKa = 6.72 KK1523 pKa = 10.61 KK1524 pKa = 9.8 HH1525 pKa = 7.06 LEE1527 pKa = 3.65 IFLQIARR1534 pKa = 11.84 KK1535 pKa = 9.33 NGLVLSPTKK1544 pKa = 10.21 MKK1546 pKa = 10.95 VGVQQVDD1553 pKa = 3.64 FLGATIGNSRR1563 pKa = 11.84 IRR1565 pKa = 11.84 LQPHH1569 pKa = 7.22 IIQKK1573 pKa = 9.28 VVQFDD1578 pKa = 3.75 NKK1580 pKa = 10.67 DD1581 pKa = 3.39 LQTTKK1586 pKa = 10.88 GLRR1589 pKa = 11.84 SFLGILNYY1597 pKa = 9.97 ARR1599 pKa = 11.84 SYY1601 pKa = 9.35 IPQMGKK1607 pKa = 10.1 LLGPLYY1613 pKa = 10.85 SKK1615 pKa = 10.83 VSPTGEE1621 pKa = 3.48 KK1622 pKa = 10.5 RR1623 pKa = 11.84 MNKK1626 pKa = 9.13 QDD1628 pKa = 2.8 WAIIEE1633 pKa = 4.68 KK1634 pKa = 9.39 IKK1636 pKa = 10.94 QMVEE1640 pKa = 3.65 QLPEE1644 pKa = 4.57 LEE1646 pKa = 4.71 LPPNGSVIVIEE1657 pKa = 4.51 TDD1659 pKa = 2.87 GCMEE1663 pKa = 4.26 GWGGICKK1670 pKa = 9.57 WKK1672 pKa = 10.64 FPGAPRR1678 pKa = 11.84 NQEE1681 pKa = 3.92 KK1682 pKa = 10.19 VCAYY1686 pKa = 10.41 ASGRR1690 pKa = 11.84 FQPIKK1695 pKa = 9.96 STIDD1699 pKa = 3.21 AEE1701 pKa = 4.13 IQAVINSLDD1710 pKa = 3.29 KK1711 pKa = 11.22 FKK1713 pKa = 10.53 IYY1715 pKa = 10.85 YY1716 pKa = 10.11 LNQKK1720 pKa = 8.85 EE1721 pKa = 4.36 LVVRR1725 pKa = 11.84 TDD1727 pKa = 3.16 CQAIVSFYY1735 pKa = 11.4 EE1736 pKa = 3.87 KK1737 pKa = 9.84 MANNKK1742 pKa = 8.88 PSRR1745 pKa = 11.84 VRR1747 pKa = 11.84 WLTFSDD1753 pKa = 5.33 FITGIGVPVKK1763 pKa = 10.44 FEE1765 pKa = 5.06 HH1766 pKa = 7.65 IDD1768 pKa = 3.77 GEE1770 pKa = 4.68 DD1771 pKa = 3.42 NLLADD1776 pKa = 3.87 TLSRR1780 pKa = 11.84 LVVMMLHH1787 pKa = 6.34 EE1788 pKa = 4.33 EE1789 pKa = 4.75 AYY1791 pKa = 9.54 TEE1793 pKa = 3.91 PLQRR1797 pKa = 11.84 ILPLLSKK1804 pKa = 10.75 KK1805 pKa = 9.98 EE1806 pKa = 3.93 AVHH1809 pKa = 6.23 VLTHH1813 pKa = 6.78 KK1814 pKa = 10.67 PILKK1818 pKa = 9.95 CGCGKK1823 pKa = 8.35 TAIRR1827 pKa = 11.84 KK1828 pKa = 7.04 MSRR1831 pKa = 11.84 TSRR1834 pKa = 11.84 NPNRR1838 pKa = 11.84 HH1839 pKa = 5.7 YY1840 pKa = 10.76 YY1841 pKa = 10.28 CCEE1844 pKa = 3.67 QEE1846 pKa = 5.46 KK1847 pKa = 9.76 CHH1849 pKa = 5.8 CWWWEE1854 pKa = 3.66 DD1855 pKa = 3.82 HH1856 pKa = 6.62 LLQFAAEE1863 pKa = 4.17 RR1864 pKa = 11.84 GALEE1868 pKa = 4.0 QEE1870 pKa = 4.25 ALRR1873 pKa = 11.84 MEE1875 pKa = 4.45 EE1876 pKa = 4.72 LFDD1879 pKa = 4.08 RR1880 pKa = 11.84 LQFNTNEE1887 pKa = 3.98 PHH1889 pKa = 6.95 GGPLEE1894 pKa = 5.42 DD1895 pKa = 5.88 DD1896 pKa = 4.37 DD1897 pKa = 5.05 QASLLDD1903 pKa = 3.83 AVGLL1907 pKa = 3.94
Molecular weight: 217.64 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 5.37
IPC2_protein 5.397
IPC_protein 5.397
Toseland 5.537
ProMoST 5.614
Dawson 5.486
Bjellqvist 5.575
Wikipedia 5.397
Rodwell 5.436
Grimsley 5.55
Solomon 5.486
Lehninger 5.461
Nozaki 5.664
DTASelect 5.804
Thurlkill 5.639
EMBOSS 5.575
Sillero 5.753
Patrickios 4.139
IPC_peptide 5.499
IPC2_peptide 5.753
IPC2.peptide.svr19 5.723
Protein with the highest isoelectric point:
>tr|E3SW31|E3SW31_9VIRU Reverse transcriptase OS=Pineapple bacilliform CO virus OX=2033633 PE=4 SV=1
MM1 pKa = 7.47 SLQEE5 pKa = 3.95 KK6 pKa = 9.48 RR7 pKa = 11.84 QNKK10 pKa = 9.16 AYY12 pKa = 9.96 KK13 pKa = 9.6 EE14 pKa = 4.01 ALEE17 pKa = 4.12 EE18 pKa = 4.4 TRR20 pKa = 11.84 NLWDD24 pKa = 3.5 TAVGFVDD31 pKa = 4.0 KK32 pKa = 11.47 SEE34 pKa = 3.85 IVANIGTITKK44 pKa = 9.87 QLNTVLYY51 pKa = 10.26 LLLDD55 pKa = 3.92 LSEE58 pKa = 4.82 RR59 pKa = 11.84 ISRR62 pKa = 11.84 LEE64 pKa = 3.9 KK65 pKa = 10.32 VAPPQTKK72 pKa = 10.23 DD73 pKa = 2.81 ISKK76 pKa = 10.6 DD77 pKa = 3.37 LEE79 pKa = 4.17 KK80 pKa = 10.79 LQKK83 pKa = 9.86 QLSGLRR89 pKa = 11.84 ISEE92 pKa = 4.17 EE93 pKa = 3.94 GGSNLKK99 pKa = 9.43 QKK101 pKa = 10.33 KK102 pKa = 8.79 VPLRR106 pKa = 11.84 VFRR109 pKa = 11.84 NPFEE113 pKa = 4.03 ILKK116 pKa = 11.02 GEE118 pKa = 4.01 ISTSKK123 pKa = 10.94
Molecular weight: 14.01 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 8.737
IPC2_protein 8.77
IPC_protein 8.712
Toseland 9.809
ProMoST 9.399
Dawson 9.926
Bjellqvist 9.487
Wikipedia 10.014
Rodwell 10.599
Grimsley 9.955
Solomon 9.97
Lehninger 9.955
Nozaki 9.765
DTASelect 9.487
Thurlkill 9.794
EMBOSS 10.175
Sillero 9.823
Patrickios 10.379
IPC_peptide 9.984
IPC2_peptide 7.805
IPC2.peptide.svr19 7.744
Peptides (in silico digests for buttom-up proteomics)
Below you can find
in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.
Try ESI
ChTry ESI
ArgC ESI
LysN ESI
TryLysC ESI
Try MALDI
ChTry MALDI
ArgC MALDI
LysN MALDI
TryLysC MALDI
Try LTQ
ChTry LTQ
ArgC LTQ
LysN LTQ
TryLysC LTQ
Try MSlow
ChTry MSlow
ArgC MSlow
LysN MSlow
TryLysC MSlow
Try MShigh
ChTry MShigh
ArgC MShigh
LysN MShigh
TryLysC MShigh
General Statistics
Number of major isoforms
Number of additional isoforms
Number of all proteins
Number of amino acids
Min. Seq. Length
Max. Seq. Length
Avg. Seq. Length
Avg. Mol. Weight
3
0
3
2205
123
1907
735.0
84.03
Amino acid frequency
Ala
Cys
Asp
Glu
Phe
Gly
His
Ile
Lys
Leu
6.168 ± 0.498
1.769 ± 0.597
5.215 ± 0.457
9.705 ± 0.473
3.311 ± 0.682
5.397 ± 0.699
2.449 ± 0.642
6.122 ± 0.116
7.302 ± 1.451
9.569 ± 1.541
Met
Asn
Gln
Pro
Arg
Ser
Thr
Val
Trp
Tyr
2.086 ± 0.534
4.172 ± 0.227
4.444 ± 0.737
5.125 ± 0.546
5.669 ± 0.245
5.578 ± 0.798
5.488 ± 0.401
5.941 ± 0.198
1.224 ± 0.113
3.265 ± 0.535
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level
Most of the basic statistics you can see at this page can be downloaded from this CSV file
For dipeptide frequency statistics click here