Amino acid dipepetide frequency for Shuangao insect virus 12

Apart from single amino acid frequencies one can also calculate so called amino acid dipeptide frequency.

There is 400 possibilites (441 if we consider Xaa as additional 21st amino acid representing all non-standard or unknown amino acids). Thus, if the dipeptides would be present randomly in proteins each amino acid dipeptide should be present with 0.25% frequency. As it is not the case in the nature, for better visablity all more than expected dipepetides are marked by red, and those which are underrepresented are marked by blue in the table.

All values are presented as per milles (‰), therefore need to be multiplied by 10-3.

For more information see sequence space article on Wikipedia.

AlaCysAspGluPheGlyHisIleLysLeuMetAsnProGlnArgSerThrValTrpTyrXaa
Ala
3.156AlaAla: 3.156 ± 0.0
0.351AlaCys: 0.351 ± 0.0
3.156AlaAsp: 3.156 ± 0.0
4.909AlaGlu: 4.909 ± 0.0
3.506AlaPhe: 3.506 ± 0.0
2.104AlaGly: 2.104 ± 0.0
0.0AlaHis: 0.0 ± 0.0
5.61AlaIle: 5.61 ± 0.0
2.104AlaLys: 2.104 ± 0.0
1.403AlaLeu: 1.403 ± 0.0
1.403AlaMet: 1.403 ± 0.0
3.156AlaAsn: 3.156 ± 0.0
1.753AlaPro: 1.753 ± 0.0
0.701AlaGln: 0.701 ± 0.0
1.753AlaArg: 1.753 ± 0.0
3.156AlaSer: 3.156 ± 0.0
2.104AlaThr: 2.104 ± 0.0
3.857AlaVal: 3.857 ± 0.0
0.351AlaTrp: 0.351 ± 0.0
1.403AlaTyr: 1.403 ± 0.0
0.0AlaXaa: 0.0 ± 0.0
Cys
2.104CysAla: 2.104 ± 0.0
1.052CysCys: 1.052 ± 0.0
2.454CysAsp: 2.454 ± 0.0
0.701CysGlu: 0.701 ± 0.0
1.052CysPhe: 1.052 ± 0.0
1.052CysGly: 1.052 ± 0.0
0.351CysHis: 0.351 ± 0.0
2.454CysIle: 2.454 ± 0.0
1.052CysLys: 1.052 ± 0.0
2.454CysLeu: 2.454 ± 0.0
0.701CysMet: 0.701 ± 0.0
0.351CysAsn: 0.351 ± 0.0
0.351CysPro: 0.351 ± 0.0
0.0CysGln: 0.0 ± 0.0
1.052CysArg: 1.052 ± 0.0
1.052CysSer: 1.052 ± 0.0
1.403CysThr: 1.403 ± 0.0
2.104CysVal: 2.104 ± 0.0
0.0CysTrp: 0.0 ± 0.0
2.104CysTyr: 2.104 ± 0.0
0.0CysXaa: 0.0 ± 0.0
Asp
3.156AspAla: 3.156 ± 0.0
0.701AspCys: 0.701 ± 0.0
3.857AspAsp: 3.857 ± 0.0
5.259AspGlu: 5.259 ± 0.0
3.857AspPhe: 3.857 ± 0.0
2.104AspGly: 2.104 ± 0.0
0.701AspHis: 0.701 ± 0.0
5.259AspIle: 5.259 ± 0.0
5.961AspLys: 5.961 ± 0.0
7.013AspLeu: 7.013 ± 0.0
2.454AspMet: 2.454 ± 0.0
1.753AspAsn: 1.753 ± 0.0
0.701AspPro: 0.701 ± 0.0
1.052AspGln: 1.052 ± 0.0
1.753AspArg: 1.753 ± 0.0
4.558AspSer: 4.558 ± 0.0
4.909AspThr: 4.909 ± 0.0
3.506AspVal: 3.506 ± 0.0
1.052AspTrp: 1.052 ± 0.0
3.857AspTyr: 3.857 ± 0.0
0.0AspXaa: 0.0 ± 0.0
Glu
3.156GluAla: 3.156 ± 0.0
2.454GluCys: 2.454 ± 0.0
5.259GluAsp: 5.259 ± 0.0
0.701GluGlu: 0.701 ± 0.0
3.506GluPhe: 3.506 ± 0.0
2.104GluGly: 2.104 ± 0.0
1.052GluHis: 1.052 ± 0.0
4.558GluIle: 4.558 ± 0.0
4.208GluLys: 4.208 ± 0.0
4.208GluLeu: 4.208 ± 0.0
4.208GluMet: 4.208 ± 0.0
2.104GluAsn: 2.104 ± 0.0
2.104GluPro: 2.104 ± 0.0
1.403GluGln: 1.403 ± 0.0
2.805GluArg: 2.805 ± 0.0
6.311GluSer: 6.311 ± 0.0
1.753GluThr: 1.753 ± 0.0
3.506GluVal: 3.506 ± 0.0
0.351GluTrp: 0.351 ± 0.0
1.403GluTyr: 1.403 ± 0.0
0.0GluXaa: 0.0 ± 0.0
Phe
1.052PheAla: 1.052 ± 0.0
1.403PheCys: 1.403 ± 0.0
3.857PheAsp: 3.857 ± 0.0
2.805PheGlu: 2.805 ± 0.0
1.403PhePhe: 1.403 ± 0.0
2.805PheGly: 2.805 ± 0.0
1.403PheHis: 1.403 ± 0.0
2.805PheIle: 2.805 ± 0.0
3.857PheLys: 3.857 ± 0.0
1.753PheLeu: 1.753 ± 0.0
1.403PheMet: 1.403 ± 0.0
1.052PheAsn: 1.052 ± 0.0
2.805PhePro: 2.805 ± 0.0
0.701PheGln: 0.701 ± 0.0
2.454PheArg: 2.454 ± 0.0
5.61PheSer: 5.61 ± 0.0
2.454PheThr: 2.454 ± 0.0
6.311PheVal: 6.311 ± 0.0
0.0PheTrp: 0.0 ± 0.0
3.156PheTyr: 3.156 ± 0.0
0.0PheXaa: 0.0 ± 0.0
Gly
1.052GlyAla: 1.052 ± 0.0
0.351GlyCys: 0.351 ± 0.0
3.156GlyAsp: 3.156 ± 0.0
3.506GlyGlu: 3.506 ± 0.0
2.454GlyPhe: 2.454 ± 0.0
1.403GlyGly: 1.403 ± 0.0
0.351GlyHis: 0.351 ± 0.0
4.558GlyIle: 4.558 ± 0.0
2.454GlyLys: 2.454 ± 0.0
2.805GlyLeu: 2.805 ± 0.0
0.701GlyMet: 0.701 ± 0.0
1.753GlyAsn: 1.753 ± 0.0
0.701GlyPro: 0.701 ± 0.0
1.753GlyGln: 1.753 ± 0.0
1.052GlyArg: 1.052 ± 0.0
5.961GlySer: 5.961 ± 0.0
2.454GlyThr: 2.454 ± 0.0
1.753GlyVal: 1.753 ± 0.0
0.0GlyTrp: 0.0 ± 0.0
2.805GlyTyr: 2.805 ± 0.0
0.0GlyXaa: 0.0 ± 0.0
His
0.701HisAla: 0.701 ± 0.0
0.0HisCys: 0.0 ± 0.0
0.701HisAsp: 0.701 ± 0.0
1.052HisGlu: 1.052 ± 0.0
0.701HisPhe: 0.701 ± 0.0
0.351HisGly: 0.351 ± 0.0
0.701HisHis: 0.701 ± 0.0
2.805HisIle: 2.805 ± 0.0
0.351HisLys: 0.351 ± 0.0
1.403HisLeu: 1.403 ± 0.0
0.701HisMet: 0.701 ± 0.0
0.351HisAsn: 0.351 ± 0.0
1.052HisPro: 1.052 ± 0.0
0.701HisGln: 0.701 ± 0.0
0.351HisArg: 0.351 ± 0.0
1.052HisSer: 1.052 ± 0.0
1.403HisThr: 1.403 ± 0.0
2.805HisVal: 2.805 ± 0.0
0.701HisTrp: 0.701 ± 0.0
0.701HisTyr: 0.701 ± 0.0
0.0HisXaa: 0.0 ± 0.0
Ile
2.805IleAla: 2.805 ± 0.0
1.753IleCys: 1.753 ± 0.0
4.558IleAsp: 4.558 ± 0.0
3.156IleGlu: 3.156 ± 0.0
2.104IlePhe: 2.104 ± 0.0
2.104IleGly: 2.104 ± 0.0
1.753IleHis: 1.753 ± 0.0
5.61IleIle: 5.61 ± 0.0
7.714IleLys: 7.714 ± 0.0
4.208IleLeu: 4.208 ± 0.0
2.805IleMet: 2.805 ± 0.0
5.259IleAsn: 5.259 ± 0.0
5.61IlePro: 5.61 ± 0.0
4.558IleGln: 4.558 ± 0.0
5.61IleArg: 5.61 ± 0.0
4.208IleSer: 4.208 ± 0.0
4.909IleThr: 4.909 ± 0.0
8.065IleVal: 8.065 ± 0.0
0.351IleTrp: 0.351 ± 0.0
4.558IleTyr: 4.558 ± 0.0
0.0IleXaa: 0.0 ± 0.0
Lys
3.156LysAla: 3.156 ± 0.0
2.805LysCys: 2.805 ± 0.0
4.208LysAsp: 4.208 ± 0.0
3.506LysGlu: 3.506 ± 0.0
2.454LysPhe: 2.454 ± 0.0
2.805LysGly: 2.805 ± 0.0
0.701LysHis: 0.701 ± 0.0
5.961LysIle: 5.961 ± 0.0
4.909LysLys: 4.909 ± 0.0
4.208LysLeu: 4.208 ± 0.0
2.454LysMet: 2.454 ± 0.0
3.156LysAsn: 3.156 ± 0.0
2.805LysPro: 2.805 ± 0.0
3.857LysGln: 3.857 ± 0.0
2.104LysArg: 2.104 ± 0.0
7.013LysSer: 7.013 ± 0.0
2.104LysThr: 2.104 ± 0.0
2.805LysVal: 2.805 ± 0.0
1.753LysTrp: 1.753 ± 0.0
5.259LysTyr: 5.259 ± 0.0
0.0LysXaa: 0.0 ± 0.0
Leu
3.506LeuAla: 3.506 ± 0.0
1.403LeuCys: 1.403 ± 0.0
4.558LeuAsp: 4.558 ± 0.0
2.454LeuGlu: 2.454 ± 0.0
2.805LeuPhe: 2.805 ± 0.0
2.454LeuGly: 2.454 ± 0.0
1.403LeuHis: 1.403 ± 0.0
5.961LeuIle: 5.961 ± 0.0
3.506LeuLys: 3.506 ± 0.0
7.363LeuLeu: 7.363 ± 0.0
3.857LeuMet: 3.857 ± 0.0
4.208LeuAsn: 4.208 ± 0.0
2.104LeuPro: 2.104 ± 0.0
2.805LeuGln: 2.805 ± 0.0
4.208LeuArg: 4.208 ± 0.0
5.259LeuSer: 5.259 ± 0.0
5.61LeuThr: 5.61 ± 0.0
4.909LeuVal: 4.909 ± 0.0
0.0LeuTrp: 0.0 ± 0.0
3.857LeuTyr: 3.857 ± 0.0
0.0LeuXaa: 0.0 ± 0.0
Met
2.454MetAla: 2.454 ± 0.0
0.701MetCys: 0.701 ± 0.0
2.104MetAsp: 2.104 ± 0.0
2.104MetGlu: 2.104 ± 0.0
1.403MetPhe: 1.403 ± 0.0
1.403MetGly: 1.403 ± 0.0
1.052MetHis: 1.052 ± 0.0
1.403MetIle: 1.403 ± 0.0
1.753MetLys: 1.753 ± 0.0
1.403MetLeu: 1.403 ± 0.0
1.052MetMet: 1.052 ± 0.0
1.052MetAsn: 1.052 ± 0.0
2.454MetPro: 2.454 ± 0.0
0.701MetGln: 0.701 ± 0.0
1.753MetArg: 1.753 ± 0.0
5.961MetSer: 5.961 ± 0.0
1.753MetThr: 1.753 ± 0.0
2.805MetVal: 2.805 ± 0.0
0.351MetTrp: 0.351 ± 0.0
0.701MetTyr: 0.701 ± 0.0
0.0MetXaa: 0.0 ± 0.0
Asn
2.104AsnAla: 2.104 ± 0.0
0.351AsnCys: 0.351 ± 0.0
2.454AsnAsp: 2.454 ± 0.0
2.805AsnGlu: 2.805 ± 0.0
3.506AsnPhe: 3.506 ± 0.0
2.805AsnGly: 2.805 ± 0.0
1.753AsnHis: 1.753 ± 0.0
8.415AsnIle: 8.415 ± 0.0
3.857AsnLys: 3.857 ± 0.0
5.259AsnLeu: 5.259 ± 0.0
1.753AsnMet: 1.753 ± 0.0
4.558AsnAsn: 4.558 ± 0.0
2.454AsnPro: 2.454 ± 0.0
1.753AsnGln: 1.753 ± 0.0
1.052AsnArg: 1.052 ± 0.0
3.506AsnSer: 3.506 ± 0.0
3.156AsnThr: 3.156 ± 0.0
4.208AsnVal: 4.208 ± 0.0
1.403AsnTrp: 1.403 ± 0.0
2.454AsnTyr: 2.454 ± 0.0
0.0AsnXaa: 0.0 ± 0.0
Pro
0.351ProAla: 0.351 ± 0.0
0.351ProCys: 0.351 ± 0.0
1.403ProAsp: 1.403 ± 0.0
3.156ProGlu: 3.156 ± 0.0
2.805ProPhe: 2.805 ± 0.0
2.104ProGly: 2.104 ± 0.0
1.753ProHis: 1.753 ± 0.0
5.961ProIle: 5.961 ± 0.0
1.403ProLys: 1.403 ± 0.0
2.104ProLeu: 2.104 ± 0.0
1.753ProMet: 1.753 ± 0.0
3.156ProAsn: 3.156 ± 0.0
1.753ProPro: 1.753 ± 0.0
0.0ProGln: 0.0 ± 0.0
0.701ProArg: 0.701 ± 0.0
2.805ProSer: 2.805 ± 0.0
2.104ProThr: 2.104 ± 0.0
3.857ProVal: 3.857 ± 0.0
0.351ProTrp: 0.351 ± 0.0
1.403ProTyr: 1.403 ± 0.0
0.0ProXaa: 0.0 ± 0.0
Gln
1.753GlnAla: 1.753 ± 0.0
0.0GlnCys: 0.0 ± 0.0
2.805GlnAsp: 2.805 ± 0.0
2.104GlnGlu: 2.104 ± 0.0
2.454GlnPhe: 2.454 ± 0.0
0.701GlnGly: 0.701 ± 0.0
0.701GlnHis: 0.701 ± 0.0
0.701GlnIle: 0.701 ± 0.0
2.454GlnLys: 2.454 ± 0.0
3.156GlnLeu: 3.156 ± 0.0
1.052GlnMet: 1.052 ± 0.0
1.753GlnAsn: 1.753 ± 0.0
2.104GlnPro: 2.104 ± 0.0
1.052GlnGln: 1.052 ± 0.0
1.052GlnArg: 1.052 ± 0.0
1.753GlnSer: 1.753 ± 0.0
1.753GlnThr: 1.753 ± 0.0
2.104GlnVal: 2.104 ± 0.0
0.351GlnTrp: 0.351 ± 0.0
0.351GlnTyr: 0.351 ± 0.0
0.0GlnXaa: 0.0 ± 0.0
Arg
2.104ArgAla: 2.104 ± 0.0
2.104ArgCys: 2.104 ± 0.0
2.104ArgAsp: 2.104 ± 0.0
2.104ArgGlu: 2.104 ± 0.0
1.052ArgPhe: 1.052 ± 0.0
1.403ArgGly: 1.403 ± 0.0
0.701ArgHis: 0.701 ± 0.0
2.805ArgIle: 2.805 ± 0.0
3.156ArgLys: 3.156 ± 0.0
3.156ArgLeu: 3.156 ± 0.0
2.104ArgMet: 2.104 ± 0.0
2.454ArgAsn: 2.454 ± 0.0
0.701ArgPro: 0.701 ± 0.0
0.351ArgGln: 0.351 ± 0.0
3.156ArgArg: 3.156 ± 0.0
3.857ArgSer: 3.857 ± 0.0
3.156ArgThr: 3.156 ± 0.0
2.805ArgVal: 2.805 ± 0.0
0.701ArgTrp: 0.701 ± 0.0
3.156ArgTyr: 3.156 ± 0.0
0.0ArgXaa: 0.0 ± 0.0
Ser
3.857SerAla: 3.857 ± 0.0
3.506SerCys: 3.506 ± 0.0
4.558SerAsp: 4.558 ± 0.0
6.662SerGlu: 6.662 ± 0.0
4.558SerPhe: 4.558 ± 0.0
3.857SerGly: 3.857 ± 0.0
0.701SerHis: 0.701 ± 0.0
7.363SerIle: 7.363 ± 0.0
5.259SerLys: 5.259 ± 0.0
7.714SerLeu: 7.714 ± 0.0
1.753SerMet: 1.753 ± 0.0
7.013SerAsn: 7.013 ± 0.0
3.156SerPro: 3.156 ± 0.0
2.454SerGln: 2.454 ± 0.0
2.104SerArg: 2.104 ± 0.0
6.311SerSer: 6.311 ± 0.0
4.558SerThr: 4.558 ± 0.0
5.259SerVal: 5.259 ± 0.0
0.351SerTrp: 0.351 ± 0.0
2.454SerTyr: 2.454 ± 0.0
0.0SerXaa: 0.0 ± 0.0
Thr
3.857ThrAla: 3.857 ± 0.0
0.351ThrCys: 0.351 ± 0.0
3.857ThrAsp: 3.857 ± 0.0
2.104ThrGlu: 2.104 ± 0.0
3.156ThrPhe: 3.156 ± 0.0
3.857ThrGly: 3.857 ± 0.0
0.701ThrHis: 0.701 ± 0.0
2.104ThrIle: 2.104 ± 0.0
3.156ThrLys: 3.156 ± 0.0
3.857ThrLeu: 3.857 ± 0.0
0.701ThrMet: 0.701 ± 0.0
5.259ThrAsn: 5.259 ± 0.0
1.403ThrPro: 1.403 ± 0.0
0.701ThrGln: 0.701 ± 0.0
1.403ThrArg: 1.403 ± 0.0
4.208ThrSer: 4.208 ± 0.0
5.61ThrThr: 5.61 ± 0.0
5.61ThrVal: 5.61 ± 0.0
0.351ThrTrp: 0.351 ± 0.0
3.857ThrTyr: 3.857 ± 0.0
0.0ThrXaa: 0.0 ± 0.0
Val
2.454ValAla: 2.454 ± 0.0
1.753ValCys: 1.753 ± 0.0
4.909ValAsp: 4.909 ± 0.0
5.259ValGlu: 5.259 ± 0.0
3.506ValPhe: 3.506 ± 0.0
3.156ValGly: 3.156 ± 0.0
1.403ValHis: 1.403 ± 0.0
3.506ValIle: 3.506 ± 0.0
4.909ValLys: 4.909 ± 0.0
4.909ValLeu: 4.909 ± 0.0
2.454ValMet: 2.454 ± 0.0
6.311ValAsn: 6.311 ± 0.0
3.506ValPro: 3.506 ± 0.0
3.156ValGln: 3.156 ± 0.0
5.61ValArg: 5.61 ± 0.0
5.61ValSer: 5.61 ± 0.0
2.805ValThr: 2.805 ± 0.0
4.909ValVal: 4.909 ± 0.0
0.351ValTrp: 0.351 ± 0.0
3.156ValTyr: 3.156 ± 0.0
0.0ValXaa: 0.0 ± 0.0
Trp
0.351TrpAla: 0.351 ± 0.0
0.701TrpCys: 0.701 ± 0.0
0.351TrpAsp: 0.351 ± 0.0
0.351TrpGlu: 0.351 ± 0.0
0.351TrpPhe: 0.351 ± 0.0
0.0TrpGly: 0.0 ± 0.0
0.701TrpHis: 0.701 ± 0.0
0.701TrpIle: 0.701 ± 0.0
0.351TrpLys: 0.351 ± 0.0
0.701TrpLeu: 0.701 ± 0.0
0.351TrpMet: 0.351 ± 0.0
0.351TrpAsn: 0.351 ± 0.0
0.701TrpPro: 0.701 ± 0.0
0.0TrpGln: 0.0 ± 0.0
0.351TrpArg: 0.351 ± 0.0
0.701TrpSer: 0.701 ± 0.0
0.701TrpThr: 0.701 ± 0.0
1.403TrpVal: 1.403 ± 0.0
0.351TrpTrp: 0.351 ± 0.0
0.351TrpTyr: 0.351 ± 0.0
0.0TrpXaa: 0.0 ± 0.0
Tyr
2.805TyrAla: 2.805 ± 0.0
1.753TyrCys: 1.753 ± 0.0
3.156TyrAsp: 3.156 ± 0.0
2.454TyrGlu: 2.454 ± 0.0
2.454TyrPhe: 2.454 ± 0.0
2.454TyrGly: 2.454 ± 0.0
0.701TyrHis: 0.701 ± 0.0
3.156TyrIle: 3.156 ± 0.0
5.61TyrLys: 5.61 ± 0.0
3.156TyrLeu: 3.156 ± 0.0
0.351TyrMet: 0.351 ± 0.0
4.909TyrAsn: 4.909 ± 0.0
1.052TyrPro: 1.052 ± 0.0
2.454TyrGln: 2.454 ± 0.0
2.805TyrArg: 2.805 ± 0.0
4.558TyrSer: 4.558 ± 0.0
1.403TyrThr: 1.403 ± 0.0
1.052TyrVal: 1.052 ± 0.0
0.701TyrTrp: 0.701 ± 0.0
2.454TyrTyr: 2.454 ± 0.0
0.0TyrXaa: 0.0 ± 0.0
Xaa
0.0XaaAla: 0.0 ± 0.0
0.0XaaCys: 0.0 ± 0.0
0.0XaaAsp: 0.0 ± 0.0
0.0XaaGlu: 0.0 ± 0.0
0.0XaaPhe: 0.0 ± 0.0
0.0XaaGly: 0.0 ± 0.0
0.0XaaHis: 0.0 ± 0.0
0.0XaaIle: 0.0 ± 0.0
0.0XaaLys: 0.0 ± 0.0
0.0XaaLeu: 0.0 ± 0.0
0.0XaaMet: 0.0 ± 0.0
0.0XaaAsn: 0.0 ± 0.0
0.0XaaPro: 0.0 ± 0.0
0.0XaaGln: 0.0 ± 0.0
0.0XaaArg: 0.0 ± 0.0
0.0XaaSer: 0.0 ± 0.0
0.0XaaThr: 0.0 ± 0.0
0.0XaaVal: 0.0 ± 0.0
0.0XaaTrp: 0.0 ± 0.0
0.0XaaTyr: 0.0 ± 0.0
0.0XaaXaa: 0.0 ± 0.0
Statistics based on 1 proteins (2853 amino acids)

Note: The error has been estimated with the bootstraping (x100) at the protein level

Above dipeptide statistics (among other stats for this proteome) you can download from this CSV file
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski