Chrysochromulina parva virophage Moe

Taxonomy: Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Maveriviricetes; Priklausovirales; Lavidaviridae; unclassified Lavidaviridae

Average proteome isoelectric point is 6.45

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 23 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A499SF35|A0A499SF35_9VIRU S3H helicase OS=Chrysochromulina parva virophage Moe OX=2420055 GN=CpVVM_09 PE=4 SV=1
MM1 pKa = 7.44TNYY4 pKa = 8.47TNCISIEE11 pKa = 3.84KK12 pKa = 10.26ALYY15 pKa = 9.93FDD17 pKa = 5.05LFDD20 pKa = 6.38DD21 pKa = 5.82IDD23 pKa = 4.23YY24 pKa = 10.81KK25 pKa = 9.87WLKK28 pKa = 10.59LILDD32 pKa = 3.97PSVDD36 pKa = 3.34RR37 pKa = 11.84EE38 pKa = 4.03EE39 pKa = 4.59YY40 pKa = 10.52DD41 pKa = 3.61FEE43 pKa = 5.28VEE45 pKa = 4.31IEE47 pKa = 4.61DD48 pKa = 3.77IPVEE52 pKa = 4.01EE53 pKa = 4.43VIEE56 pKa = 4.63GFFKK60 pKa = 10.62TSPEE64 pKa = 3.9CRR66 pKa = 11.84TTFTFDD72 pKa = 3.35LKK74 pKa = 10.4MAQTRR79 pKa = 11.84PSFNANGYY87 pKa = 6.26ITEE90 pKa = 4.74YY91 pKa = 8.17ITKK94 pKa = 8.83TFTKK98 pKa = 9.63TIDD101 pKa = 3.51YY102 pKa = 10.0GGSSAIAMTLCGMKK116 pKa = 10.5DD117 pKa = 3.3NEE119 pKa = 4.05EE120 pKa = 4.28DD121 pKa = 3.63EE122 pKa = 4.66EE123 pKa = 4.47EE124 pKa = 4.39EE125 pKa = 4.75EE126 pKa = 4.61EE127 pKa = 4.82EE128 pKa = 4.45EE129 pKa = 4.55NNN131 pKa = 4.05

Molecular weight: 15.32 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4P1LUG4|A0A4P1LUG4_9VIRU Uncharacterized protein OS=Chrysochromulina parva virophage Moe OX=2420055 GN=CpVVM_05 PE=4 SV=1
MM1 pKa = 7.78PNCLDD6 pKa = 3.48KK7 pKa = 11.2TKK9 pKa = 10.99LKK11 pKa = 11.22ALMKK15 pKa = 9.83GFKK18 pKa = 9.71KK19 pKa = 10.64RR20 pKa = 11.84EE21 pKa = 3.98VKK23 pKa = 10.46EE24 pKa = 3.86EE25 pKa = 4.07EE26 pKa = 4.04IIKK29 pKa = 10.43PKK31 pKa = 10.81AFVPAVTKK39 pKa = 11.04GNTPTLAEE47 pKa = 4.03KK48 pKa = 10.2PINKK52 pKa = 9.59KK53 pKa = 10.39LRR55 pKa = 11.84IKK57 pKa = 10.53IKK59 pKa = 10.54AA60 pKa = 3.28

Molecular weight: 6.8 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

23

0

23

6659

60

1745

289.5

32.86

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.848 ± 1.186

0.931 ± 0.3

6.427 ± 0.283

7.298 ± 0.487

3.724 ± 0.319

5.211 ± 0.509

1.472 ± 0.223

7.148 ± 0.652

8.335 ± 0.84

8.259 ± 0.436

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.463 ± 0.162

7.163 ± 0.587

4.821 ± 0.736

3.874 ± 0.542

4.37 ± 0.455

6.052 ± 0.514

6.187 ± 0.384

4.265 ± 0.279

0.721 ± 0.155

4.43 ± 0.373
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski