Streptococcus satellite phage Javan315

Taxonomy: Viruses; unclassified bacterial viruses

Average proteome isoelectric point is 6.54

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 16 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4D5ZJH5|A0A4D5ZJH5_9VIRU Uncharacterized protein OS=Streptococcus satellite phage Javan315 OX=2558631 GN=JavanS315_0009 PE=4 SV=1
MM1 pKa = 6.87ITDD4 pKa = 3.77VEE6 pKa = 4.26EE7 pKa = 4.04TTYY10 pKa = 11.07NGHH13 pKa = 6.47GEE15 pKa = 3.97ITVEE19 pKa = 4.03YY20 pKa = 8.99TNDD23 pKa = 3.08VALTEE28 pKa = 4.07LFDD31 pKa = 5.6RR32 pKa = 11.84IKK34 pKa = 10.89SLYY37 pKa = 9.93KK38 pKa = 10.28KK39 pKa = 10.53GEE41 pKa = 4.11SYY43 pKa = 7.72EE44 pKa = 4.32TKK46 pKa = 10.25PFLHH50 pKa = 6.71FKK52 pKa = 10.38ILEE55 pKa = 4.7DD56 pKa = 4.67DD57 pKa = 4.84LEE59 pKa = 4.48TKK61 pKa = 10.46PGVFTAEE68 pKa = 3.68EE69 pKa = 4.15VMDD72 pKa = 3.89FLGII76 pKa = 3.8

Molecular weight: 8.77 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4D5ZPK2|A0A4D5ZPK2_9VIRU Integrase OS=Streptococcus satellite phage Javan315 OX=2558631 GN=JavanS315_0016 PE=3 SV=1
MM1 pKa = 7.92KK2 pKa = 9.25ITEE5 pKa = 4.18YY6 pKa = 10.54KK7 pKa = 10.41KK8 pKa = 10.18KK9 pKa = 10.4DD10 pKa = 3.2GSVVYY15 pKa = 10.34RR16 pKa = 11.84SSVYY20 pKa = 10.71LGIDD24 pKa = 3.15TVTGKK29 pKa = 10.24KK30 pKa = 10.26VKK32 pKa = 8.24TTISDD37 pKa = 3.44RR38 pKa = 11.84TKK40 pKa = 11.03NRR42 pKa = 11.84LKK44 pKa = 10.91SKK46 pKa = 10.43AIQAKK51 pKa = 9.85VEE53 pKa = 4.13FEE55 pKa = 4.56KK56 pKa = 11.26NGSTVTKK63 pKa = 8.73TVNVTTYY70 pKa = 10.96QEE72 pKa = 4.3LTEE75 pKa = 4.54LWLEE79 pKa = 4.43NYY81 pKa = 9.68CHH83 pKa = 5.63TVKK86 pKa = 10.77HH87 pKa = 5.55STLIGAKK94 pKa = 10.28NNIKK98 pKa = 10.37KK99 pKa = 10.4YY100 pKa = 10.16LLPAFGDD107 pKa = 3.76YY108 pKa = 10.88KK109 pKa = 10.73LDD111 pKa = 3.6KK112 pKa = 9.25LTPPIIQHH120 pKa = 5.96QVNQWAIDD128 pKa = 3.66YY129 pKa = 8.37NQLGKK134 pKa = 10.84GYY136 pKa = 8.08QQYY139 pKa = 10.05NQLHH143 pKa = 6.4ALNKK147 pKa = 10.1RR148 pKa = 11.84ILSYY152 pKa = 10.8AVSLQVISSNPASDD166 pKa = 3.94IIIPRR171 pKa = 11.84RR172 pKa = 11.84KK173 pKa = 9.31PKK175 pKa = 10.29EE176 pKa = 4.01GQKK179 pKa = 10.65LKK181 pKa = 11.15YY182 pKa = 10.46LDD184 pKa = 4.52DD185 pKa = 4.36NNLKK189 pKa = 10.6KK190 pKa = 10.67FLDD193 pKa = 4.02YY194 pKa = 11.17LDD196 pKa = 4.36QLPNTYY202 pKa = 10.72KK203 pKa = 10.73NFSDD207 pKa = 3.42TVLYY211 pKa = 8.14KK212 pKa = 10.44TLLATGLRR220 pKa = 11.84IRR222 pKa = 11.84EE223 pKa = 4.08CLALKK228 pKa = 10.05WSDD231 pKa = 3.05IDD233 pKa = 3.95LQNGSISVTKK243 pKa = 9.71TLNTLKK249 pKa = 10.49EE250 pKa = 3.91ITSPKK255 pKa = 8.96SKK257 pKa = 10.77SSIRR261 pKa = 11.84EE262 pKa = 3.4IALDD266 pKa = 3.68TKK268 pKa = 9.91TVLMLRR274 pKa = 11.84LYY276 pKa = 10.4KK277 pKa = 10.37ARR279 pKa = 11.84QSQIGRR285 pKa = 11.84EE286 pKa = 3.77IGVTFEE292 pKa = 4.95KK293 pKa = 10.88VFSDD297 pKa = 3.16TFDD300 pKa = 3.35NYY302 pKa = 10.97RR303 pKa = 11.84EE304 pKa = 4.14AEE306 pKa = 3.96ALRR309 pKa = 11.84FRR311 pKa = 11.84LEE313 pKa = 3.77KK314 pKa = 10.18HH315 pKa = 6.13LKK317 pKa = 10.08LAGCPRR323 pKa = 11.84LSFHH327 pKa = 7.61AFRR330 pKa = 11.84HH331 pKa = 4.58THH333 pKa = 6.92ASLLLNAGLPYY344 pKa = 10.43KK345 pKa = 10.2EE346 pKa = 3.68IQTRR350 pKa = 11.84LGHH353 pKa = 5.92SKK355 pKa = 10.32ISMTMDD361 pKa = 3.2IYY363 pKa = 11.76SHH365 pKa = 7.09LSKK368 pKa = 10.92DD369 pKa = 3.71NKK371 pKa = 10.37KK372 pKa = 10.32KK373 pKa = 9.89ATSFYY378 pKa = 10.66EE379 pKa = 3.92KK380 pKa = 10.27AIEE383 pKa = 4.03NLQSSS388 pKa = 4.18

Molecular weight: 44.53 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

16

0

16

2612

38

484

163.3

19.06

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.015 ± 0.384

0.459 ± 0.084

6.547 ± 0.6

8.729 ± 0.897

4.518 ± 0.583

4.977 ± 0.245

1.57 ± 0.254

6.508 ± 0.561

10.26 ± 0.459

9.992 ± 0.804

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.948 ± 0.449

4.786 ± 0.362

2.221 ± 0.26

4.403 ± 0.599

4.9 ± 0.564

5.398 ± 0.577

5.628 ± 0.665

5.092 ± 0.479

0.957 ± 0.122

5.092 ± 0.269
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski