Mucilaginibacter gossypii

Taxonomy: cellular organisms; Bacteria; FCB group; Bacteroidetes/Chlorobi group; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter

Average proteome isoelectric point is 6.95

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 6105 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1G8N9U1|A0A1G8N9U1_9SPHI Pimeloyl-ACP methyl ester carboxylesterase OS=Mucilaginibacter gossypii OX=551996 GN=SAMN05192573_13210 PE=4 SV=1
MM1 pKa = 7.94PDD3 pKa = 3.23WEE5 pKa = 4.67TFGPPFQHH13 pKa = 6.92RR14 pKa = 11.84LISTTSIATEE24 pKa = 4.18VFFDD28 pKa = 4.51LYY30 pKa = 10.89FSNSVTYY37 pKa = 10.65DD38 pKa = 3.32SADD41 pKa = 3.43SPLLL45 pKa = 3.82

Molecular weight: 5.14 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1G8KNW6|A0A1G8KNW6_9SPHI Uncharacterized protein OS=Mucilaginibacter gossypii OX=551996 GN=SAMN05192573_12124 PE=4 SV=1
MM1 pKa = 7.46KK2 pKa = 10.29KK3 pKa = 10.13IILILCLAVAGITNANAQTVIVMRR27 pKa = 11.84PVRR30 pKa = 11.84RR31 pKa = 11.84VVVTPAHH38 pKa = 4.95TVIVRR43 pKa = 11.84PVRR46 pKa = 11.84RR47 pKa = 11.84VVVARR52 pKa = 11.84PVVVTRR58 pKa = 11.84RR59 pKa = 11.84RR60 pKa = 11.84VVVVHH65 pKa = 6.37HH66 pKa = 6.79

Molecular weight: 7.35 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

6105

0

6105

2079586

25

3000

340.6

38.14

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.72 ± 0.031

0.789 ± 0.009

5.451 ± 0.023

5.239 ± 0.031

4.895 ± 0.023

6.939 ± 0.028

1.942 ± 0.012

7.198 ± 0.027

6.979 ± 0.027

9.387 ± 0.03

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.254 ± 0.017

5.705 ± 0.03

3.97 ± 0.018

3.77 ± 0.021

3.869 ± 0.018

6.199 ± 0.021

5.847 ± 0.024

6.38 ± 0.022

1.224 ± 0.013

4.243 ± 0.024
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski