Faeces associated gemycircularvirus 15

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Genomoviridae; Gemygorvirus; Gemygorvirus cania1; Canine associated gemygorvirus 1

Average proteome isoelectric point is 6.76

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A168MGD9|A0A168MGD9_9VIRU Replication-associated protein OS=Faeces associated gemycircularvirus 15 OX=1843735 PE=3 SV=1
MM1 pKa = 7.42SNSFRR6 pKa = 11.84LQARR10 pKa = 11.84YY11 pKa = 10.17VLLTYY16 pKa = 8.05SQCGDD21 pKa = 3.75LDD23 pKa = 3.26PWMVCDD29 pKa = 5.19HH30 pKa = 6.72LASLHH35 pKa = 6.02AEE37 pKa = 3.92CLIGRR42 pKa = 11.84EE43 pKa = 3.97NHH45 pKa = 5.59VDD47 pKa = 3.5GGIHH51 pKa = 6.05LHH53 pKa = 6.64AFVDD57 pKa = 4.11LGKK60 pKa = 9.14KK61 pKa = 8.32TDD63 pKa = 3.36IRR65 pKa = 11.84DD66 pKa = 3.35SRR68 pKa = 11.84LFDD71 pKa = 4.2VNGQHH76 pKa = 7.32PNITPCGRR84 pKa = 11.84TPQKK88 pKa = 10.31MLDD91 pKa = 3.71YY92 pKa = 10.33AVKK95 pKa = 10.78DD96 pKa = 3.61GDD98 pKa = 4.12VVAGGLDD105 pKa = 3.47PVLGDD110 pKa = 3.96EE111 pKa = 4.61VSSADD116 pKa = 4.15TVWHH120 pKa = 6.89RR121 pKa = 11.84IANAATVDD129 pKa = 4.08EE130 pKa = 4.85FWVITRR136 pKa = 11.84EE137 pKa = 3.96LAPRR141 pKa = 11.84ALLCNHH147 pKa = 5.94QSLRR151 pKa = 11.84AYY153 pKa = 10.25AEE155 pKa = 3.53WHH157 pKa = 5.77YY158 pKa = 11.06RR159 pKa = 11.84PPTLVYY165 pKa = 9.03EE166 pKa = 4.78HH167 pKa = 7.17PCEE170 pKa = 3.95LRR172 pKa = 11.84LRR174 pKa = 11.84ADD176 pKa = 4.23RR177 pKa = 11.84LPEE180 pKa = 3.99LDD182 pKa = 2.91EE183 pKa = 4.04WVRR186 pKa = 11.84EE187 pKa = 4.23SLSGTGGRR195 pKa = 11.84PKK197 pKa = 10.75SLILWGEE204 pKa = 4.09SKK206 pKa = 10.67LGKK209 pKa = 8.69TIWARR214 pKa = 11.84SLGQHH219 pKa = 6.94IYY221 pKa = 11.12CCMQFNVDD229 pKa = 4.01DD230 pKa = 3.95VRR232 pKa = 11.84ANLQEE237 pKa = 3.82AQYY240 pKa = 11.22AIFDD244 pKa = 5.01DD245 pKa = 3.84IQGNFQFFPSYY256 pKa = 10.36KK257 pKa = 9.0GWLGAQHH264 pKa = 6.28QFTVTDD270 pKa = 3.81KK271 pKa = 11.3YY272 pKa = 10.99KK273 pKa = 11.19GKK275 pKa = 7.67TTINWGRR282 pKa = 11.84PSIWLTNDD290 pKa = 2.94DD291 pKa = 4.27PEE293 pKa = 4.58EE294 pKa = 4.24VGHH297 pKa = 7.26VDD299 pKa = 5.37LNWLRR304 pKa = 11.84KK305 pKa = 9.22NCVIVNITEE314 pKa = 4.55SIVEE318 pKa = 4.04LVV320 pKa = 3.13

Molecular weight: 36.43 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A161IBC4|A0A161IBC4_9VIRU RepA OS=Faeces associated gemycircularvirus 15 OX=1843735 PE=3 SV=1
MM1 pKa = 7.97PIRR4 pKa = 11.84RR5 pKa = 11.84RR6 pKa = 11.84SSRR9 pKa = 11.84RR10 pKa = 11.84SAGKK14 pKa = 8.84RR15 pKa = 11.84RR16 pKa = 11.84YY17 pKa = 8.08PRR19 pKa = 11.84RR20 pKa = 11.84YY21 pKa = 8.25RR22 pKa = 11.84KK23 pKa = 9.91APARR27 pKa = 11.84RR28 pKa = 11.84RR29 pKa = 11.84RR30 pKa = 11.84QTRR33 pKa = 11.84RR34 pKa = 11.84MPARR38 pKa = 11.84RR39 pKa = 11.84VTRR42 pKa = 11.84RR43 pKa = 11.84RR44 pKa = 11.84ILNVSSIKK52 pKa = 10.52KK53 pKa = 8.93RR54 pKa = 11.84DD55 pKa = 3.48NMMSAVINPGEE66 pKa = 4.1ARR68 pKa = 11.84PTLGPLTTTTGFTSLYY84 pKa = 9.72IPTARR89 pKa = 11.84TLAPANDD96 pKa = 3.65QGEE99 pKa = 4.78SMRR102 pKa = 11.84QRR104 pKa = 11.84QTTYY108 pKa = 10.75AGWVQRR114 pKa = 11.84AVQVDD119 pKa = 4.18IIGGGVWKK127 pKa = 9.79WRR129 pKa = 11.84RR130 pKa = 11.84IVFAYY135 pKa = 9.75KK136 pKa = 10.36GGEE139 pKa = 4.23SLWTGEE145 pKa = 5.67FPGQWTEE152 pKa = 3.79PFFSKK157 pKa = 10.32SVKK160 pKa = 9.75PDD162 pKa = 3.67PDD164 pKa = 4.33DD165 pKa = 4.63PLPIAPDD172 pKa = 3.39MVRR175 pKa = 11.84LIGQPQSAQANAIRR189 pKa = 11.84DD190 pKa = 4.09LLWDD194 pKa = 3.39GHH196 pKa = 6.32EE197 pKa = 4.33GVDD200 pKa = 3.76WSSQYY205 pKa = 7.83TAKK208 pKa = 10.54VDD210 pKa = 3.68TKK212 pKa = 10.35RR213 pKa = 11.84VRR215 pKa = 11.84LMSDD219 pKa = 2.37KK220 pKa = 10.76TYY222 pKa = 11.18VFNPGNEE229 pKa = 4.15SGMSRR234 pKa = 11.84TYY236 pKa = 10.76RR237 pKa = 11.84FWYY240 pKa = 9.11PIGHH244 pKa = 6.73NIVYY248 pKa = 10.56DD249 pKa = 3.98DD250 pKa = 5.03DD251 pKa = 3.79EE252 pKa = 4.65WGASAFGRR260 pKa = 11.84VSPISVQSKK269 pKa = 10.21LGFGDD274 pKa = 3.57VYY276 pKa = 10.65IYY278 pKa = 10.41DD279 pKa = 3.18IAYY282 pKa = 9.65RR283 pKa = 11.84VVPSSGSVEE292 pKa = 3.81AQMQFSPEE300 pKa = 3.53GTYY303 pKa = 10.33YY304 pKa = 8.87WHH306 pKa = 6.98EE307 pKa = 4.02RR308 pKa = 3.5

Molecular weight: 35.35 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3

0

3

861

233

320

287.0

32.49

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.433 ± 0.752

2.091 ± 0.933

6.969 ± 0.647

4.53 ± 0.455

2.904 ± 0.237

7.666 ± 0.238

3.02 ± 0.907

4.413 ± 0.569

3.252 ± 0.475

7.898 ± 1.793

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.974 ± 0.442

3.252 ± 0.489

5.575 ± 0.731

3.833 ± 0.413

8.827 ± 1.621

6.736 ± 0.807

5.575 ± 0.3

7.201 ± 0.179

3.136 ± 0.176

3.717 ± 0.512
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski