Mustela putorius furo (European domestic ferret) (Mustela furo)
Average proteome isoelectric point is 6.9
Get precalculated fractions of proteins
Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
All
Note: above files contain also dissociation constants (pKa)
Virtual 2D-PAGE plot for 20057 proteins (isoelectric point calculated using IPC2_protein)
Get csv file with sequences according to given criteria:
* You can choose from 21 different methods for calculating isoelectric point
Summary statistics related to proteome-wise predictions
Protein with the lowest isoelectric point:
>tr|M3XW37|M3XW37_MUSPF TLE family member 6 subcortical maternal complex member OS=Mustela putorius furo OX=9669 GN=TLE6 PE=3 SV=1
XX1 pKa = 6.1 XXXXXXXARR10 pKa = 11.84 QCLQRR15 pKa = 11.84 ACEE18 pKa = 3.99 AEE20 pKa = 4.29 GAQFTSVPFGEE31 pKa = 4.59 LDD33 pKa = 3.5 FGEE36 pKa = 4.54 TAVLDD41 pKa = 3.97 AFYY44 pKa = 10.65 DD45 pKa = 3.6 ADD47 pKa = 3.83 VAVVDD52 pKa = 4.06 MSDD55 pKa = 3.43 VSRR58 pKa = 11.84 QPSLFYY64 pKa = 10.65 HH65 pKa = 6.07 LGVRR69 pKa = 11.84 EE70 pKa = 4.26 SFDD73 pKa = 3.15 MANNVILYY81 pKa = 9.92 HH82 pKa = 6.36 DD83 pKa = 4.2 TDD85 pKa = 3.21 VDD87 pKa = 3.93 TALSLL92 pKa = 3.91
Molecular weight: 9.27 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 3.754
IPC2_protein 3.923
IPC_protein 3.859
Toseland 3.656
ProMoST 4.037
Dawson 3.872
Bjellqvist 4.024
Wikipedia 3.821
Rodwell 3.694
Grimsley 3.567
Solomon 3.846
Lehninger 3.808
Nozaki 3.999
DTASelect 4.228
Thurlkill 3.719
EMBOSS 3.834
Sillero 3.986
Patrickios 1.914
IPC_peptide 3.846
IPC2_peptide 3.961
IPC2.peptide.svr19 3.893
Protein with the highest isoelectric point:
>tr|M3YEZ9|M3YEZ9_MUSPF Solute carrier family 25 member 48 OS=Mustela putorius furo OX=9669 GN=SLC25A48 PE=3 SV=1
MM1 pKa = 7.63 AGAIAKK7 pKa = 8.49 PLNNRR12 pKa = 11.84 RR13 pKa = 11.84 RR14 pKa = 11.84 RR15 pKa = 11.84 GGEE18 pKa = 3.64 GGGGGGRR25 pKa = 11.84 RR26 pKa = 11.84 RR27 pKa = 11.84 RR28 pKa = 11.84 RR29 pKa = 11.84 RR30 pKa = 11.84 RR31 pKa = 11.84 KK32 pKa = 8.18 RR33 pKa = 11.84 RR34 pKa = 11.84 KK35 pKa = 7.68 GRR37 pKa = 11.84 RR38 pKa = 11.84 RR39 pKa = 11.84 GRR41 pKa = 11.84 RR42 pKa = 11.84 RR43 pKa = 11.84 KK44 pKa = 8.78 IQKK47 pKa = 9.63
Molecular weight: 5.52 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 9.512
IPC2_protein 11.169
IPC_protein 12.764
Toseland 12.939
ProMoST 13.437
Dawson 12.939
Bjellqvist 12.925
Wikipedia 13.408
Rodwell 12.544
Grimsley 12.969
Solomon 13.437
Lehninger 13.334
Nozaki 12.939
DTASelect 12.925
Thurlkill 12.939
EMBOSS 13.437
Sillero 12.939
Patrickios 12.266
IPC_peptide 13.437
IPC2_peptide 12.427
IPC2.peptide.svr19 9.165
Peptides (in silico digests for buttom-up proteomics)
Below you can find
in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.
Try ESI
ChTry ESI
ArgC ESI
LysN ESI
TryLysC ESI
Try MALDI
ChTry MALDI
ArgC MALDI
LysN MALDI
TryLysC MALDI
Try LTQ
ChTry LTQ
ArgC LTQ
LysN LTQ
TryLysC LTQ
Try MSlow
ChTry MSlow
ArgC MSlow
LysN MSlow
TryLysC MSlow
Try MShigh
ChTry MShigh
ArgC MShigh
LysN MShigh
TryLysC MShigh
General Statistics
Number of major isoforms
Number of additional isoforms
Number of all proteins
Number of amino acids
Min. Seq. Length
Max. Seq. Length
Avg. Seq. Length
Avg. Mol. Weight
19903
154
20057
10723400
28
34392
534.6
59.47
Amino acid frequency
Ala
Cys
Asp
Glu
Phe
Gly
His
Ile
Lys
Leu
7.084 ± 0.021
2.26 ± 0.017
4.712 ± 0.012
6.95 ± 0.027
3.694 ± 0.014
6.712 ± 0.027
2.589 ± 0.009
4.301 ± 0.019
5.602 ± 0.024
10.018 ± 0.026
Met
Asn
Gln
Pro
Arg
Ser
Thr
Val
Trp
Tyr
2.105 ± 0.008
3.498 ± 0.012
6.447 ± 0.026
4.67 ± 0.018
5.828 ± 0.016
8.277 ± 0.022
5.263 ± 0.013
6.058 ± 0.018
1.235 ± 0.007
2.635 ± 0.01
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level
Most of the basic statistics you can see at this page can be downloaded from this CSV file
For dipeptide frequency statistics click here