Arboretum almendravirus

Taxonomy: Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Rhabdoviridae; Alpharhabdovirinae; Almendravirus

Average proteome isoelectric point is 7.04

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 6 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|X4QQM2|X4QQM2_9RHAB SH protein OS=Arboretum almendravirus OX=1972683 PE=4 SV=1
MM1 pKa = 7.6SNPKK5 pKa = 9.93VCDD8 pKa = 3.53DD9 pKa = 4.29LFNSRR14 pKa = 11.84RR15 pKa = 11.84MLAQIDD21 pKa = 3.78VSAFDD26 pKa = 3.26ISKK29 pKa = 10.57QISEE33 pKa = 4.92DD34 pKa = 3.57YY35 pKa = 9.26GTTRR39 pKa = 11.84GTDD42 pKa = 3.25EE43 pKa = 5.29LNDD46 pKa = 3.25IEE48 pKa = 4.75YY49 pKa = 10.98EE50 pKa = 4.05EE51 pKa = 4.82NEE53 pKa = 4.19EE54 pKa = 4.97KK55 pKa = 10.62KK56 pKa = 10.96GLEE59 pKa = 3.73NDD61 pKa = 3.22KK62 pKa = 10.51TKK64 pKa = 10.18TLTGDD69 pKa = 3.86EE70 pKa = 4.25IMTPNIFSRR79 pKa = 11.84MINTPLEE86 pKa = 4.21KK87 pKa = 10.8ANLEE91 pKa = 4.0LSEE94 pKa = 4.47TKK96 pKa = 10.3CRR98 pKa = 11.84NNKK101 pKa = 9.13PCVEE105 pKa = 3.94PRR107 pKa = 11.84QVTFNTGRR115 pKa = 11.84STEE118 pKa = 4.27SNDD121 pKa = 3.24GNKK124 pKa = 10.02SYY126 pKa = 11.55EE127 pKa = 4.04EE128 pKa = 4.91GYY130 pKa = 10.82LRR132 pKa = 11.84AIWDD136 pKa = 3.68INNLLSKK143 pKa = 10.68EE144 pKa = 4.01NFKK147 pKa = 10.47MEE149 pKa = 3.87ITRR152 pKa = 11.84DD153 pKa = 3.67PKK155 pKa = 11.12GSLTIKK161 pKa = 9.15KK162 pKa = 8.43TNDD165 pKa = 2.92SGNVEE170 pKa = 4.07KK171 pKa = 10.79CIEE174 pKa = 4.01LAKK177 pKa = 10.4SDD179 pKa = 4.32EE180 pKa = 4.49SSCSYY185 pKa = 9.16KK186 pKa = 10.44TEE188 pKa = 3.7IDD190 pKa = 3.22QDD192 pKa = 3.3ISFTDD197 pKa = 3.71SEE199 pKa = 5.0SCGVYY204 pKa = 10.23PPLHH208 pKa = 6.44YY209 pKa = 11.11DD210 pKa = 3.54LMFGGKK216 pKa = 8.97VEE218 pKa = 4.32INVKK222 pKa = 10.34VLVEE226 pKa = 4.04EE227 pKa = 4.67LKK229 pKa = 10.97SSNMDD234 pKa = 3.36KK235 pKa = 11.12DD236 pKa = 3.59DD237 pKa = 4.27LKK239 pKa = 11.05IVIQLIDD246 pKa = 3.62NNLEE250 pKa = 3.83NKK252 pKa = 8.75NAKK255 pKa = 10.17DD256 pKa = 2.83ILKK259 pKa = 10.03YY260 pKa = 10.13IKK262 pKa = 10.02HH263 pKa = 5.77SKK265 pKa = 9.79QYY267 pKa = 10.99GKK269 pKa = 9.79IVYY272 pKa = 9.21QVARR276 pKa = 11.84KK277 pKa = 9.82YY278 pKa = 10.79KK279 pKa = 9.45II280 pKa = 3.25

Molecular weight: 32.04 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|X4R558|X4R558_9RHAB G protein OS=Arboretum almendravirus OX=1972683 PE=4 SV=1
MM1 pKa = 7.67LANQFIMNNKK11 pKa = 9.35YY12 pKa = 9.44VFKK15 pKa = 9.94TFRR18 pKa = 11.84IRR20 pKa = 11.84YY21 pKa = 5.81EE22 pKa = 3.83ASFKK26 pKa = 10.44EE27 pKa = 4.54LPPHH31 pKa = 7.35SDD33 pKa = 3.85FKK35 pKa = 11.06PILDD39 pKa = 4.18IYY41 pKa = 10.48DD42 pKa = 3.75GKK44 pKa = 10.91IKK46 pKa = 10.34FYY48 pKa = 11.04EE49 pKa = 4.11VFTFIINYY57 pKa = 9.4LLHH60 pKa = 6.04LQIRR64 pKa = 11.84NKK66 pKa = 9.69VMRR69 pKa = 11.84SHH71 pKa = 7.75DD72 pKa = 3.89STFVMCFPVDD82 pKa = 3.63EE83 pKa = 4.4TWTYY87 pKa = 11.1RR88 pKa = 11.84RR89 pKa = 11.84DD90 pKa = 3.98DD91 pKa = 3.49IYY93 pKa = 11.59SFHH96 pKa = 7.78KK97 pKa = 10.04DD98 pKa = 2.55IQMVVGCEE106 pKa = 3.84VRR108 pKa = 11.84EE109 pKa = 3.82LRR111 pKa = 11.84LRR113 pKa = 11.84VIIDD117 pKa = 3.38MNTNNLPRR125 pKa = 11.84SRR127 pKa = 11.84LVRR130 pKa = 11.84DD131 pKa = 3.66VLRR134 pKa = 11.84KK135 pKa = 7.78TLSRR139 pKa = 11.84LYY141 pKa = 10.86DD142 pKa = 3.47PAISSKK148 pKa = 9.4MYY150 pKa = 10.47EE151 pKa = 4.03VIKK154 pKa = 10.51RR155 pKa = 11.84QNEE158 pKa = 4.18CC159 pKa = 3.56

Molecular weight: 19.31 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

6

0

6

3484

73

2062

580.7

67.8

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

2.641 ± 0.493

1.464 ± 0.332

6.544 ± 0.437

6.228 ± 0.586

4.65 ± 0.497

4.277 ± 0.393

2.067 ± 0.292

8.927 ± 0.293

8.266 ± 0.621

9.816 ± 0.749

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.555 ± 0.408

7.836 ± 0.377

3.243 ± 0.246

2.612 ± 0.278

4.908 ± 0.487

7.52 ± 0.168

4.822 ± 0.231

5.138 ± 0.371

1.234 ± 0.212

5.253 ± 0.347
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski