Capybara microvirus Cap1_SP_148

Taxonomy: Viruses; Monodnaviria; Sangervirae; Phixviricota; Malgrandaviricetes; Petitvirales; Microviridae; unclassified Microviridae

Average proteome isoelectric point is 6.35

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 5 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4P8W7Y6|A0A4P8W7Y6_9VIRU Uncharacterized protein OS=Capybara microvirus Cap1_SP_148 OX=2585392 PE=4 SV=1
MM1 pKa = 7.26CLKK4 pKa = 10.35YY5 pKa = 10.43KK6 pKa = 10.56YY7 pKa = 8.05LTPVPPLPDD16 pKa = 2.82ATFYY20 pKa = 11.65EE21 pKa = 5.09EE22 pKa = 4.06VHH24 pKa = 6.12TPNGYY29 pKa = 9.42KK30 pKa = 10.24VSEE33 pKa = 4.35EE34 pKa = 3.81PLYY37 pKa = 10.47PPVSAFSIEE46 pKa = 4.01NLLKK50 pKa = 10.73SGIQIYY56 pKa = 9.09PSPYY60 pKa = 8.69LRR62 pKa = 11.84PMSRR66 pKa = 11.84FNVLSSAEE74 pKa = 4.05RR75 pKa = 11.84FLNTPEE81 pKa = 4.61LVEE84 pKa = 5.57ASQKK88 pKa = 8.39WSEE91 pKa = 4.03MTEE94 pKa = 4.06EE95 pKa = 4.71FLSQAQKK102 pKa = 10.6IDD104 pKa = 3.56TSNDD108 pKa = 3.23LPDD111 pKa = 4.84DD112 pKa = 3.88KK113 pKa = 11.7

Molecular weight: 12.95 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4P8W5G6|A0A4P8W5G6_9VIRU Uncharacterized protein OS=Capybara microvirus Cap1_SP_148 OX=2585392 PE=4 SV=1
MM1 pKa = 7.39SLLGGILGGASSLLGGAINAFTAYY25 pKa = 10.43DD26 pKa = 3.68LQNQQFAEE34 pKa = 4.18QAKK37 pKa = 9.44QRR39 pKa = 11.84DD40 pKa = 3.57WQEE43 pKa = 3.93RR44 pKa = 11.84MMDD47 pKa = 4.0KK48 pKa = 10.79EE49 pKa = 3.92NAYY52 pKa = 8.33NTDD55 pKa = 2.9MWNKK59 pKa = 8.41TSEE62 pKa = 4.13FNEE65 pKa = 3.67RR66 pKa = 11.84MMRR69 pKa = 11.84AQMEE73 pKa = 4.42NASRR77 pKa = 11.84MQTEE81 pKa = 3.98QNVWNSEE88 pKa = 3.66QAQYY92 pKa = 10.97QRR94 pKa = 11.84YY95 pKa = 8.43KK96 pKa = 10.5ATGLNPLGFGGNSSTSPAIQAGSASMSPQSSAAPPMPAQYY136 pKa = 11.65ANMINPRR143 pKa = 11.84WGDD146 pKa = 3.41MLTNIAQGAEE156 pKa = 3.84LGKK159 pKa = 10.84VFGEE163 pKa = 4.08TRR165 pKa = 11.84KK166 pKa = 10.49LKK168 pKa = 10.89EE169 pKa = 3.6EE170 pKa = 4.15TKK172 pKa = 10.65NIEE175 pKa = 3.57VDD177 pKa = 3.34RR178 pKa = 11.84LKK180 pKa = 11.13KK181 pKa = 10.54LVEE184 pKa = 4.09TQLNKK189 pKa = 10.74AQIAKK194 pKa = 9.82LAEE197 pKa = 4.15EE198 pKa = 4.43VVEE201 pKa = 4.17TRR203 pKa = 11.84QRR205 pKa = 11.84ISQINLDD212 pKa = 3.94NEE214 pKa = 4.01AKK216 pKa = 10.51EE217 pKa = 4.43IINKK221 pKa = 9.74YY222 pKa = 9.61LDD224 pKa = 3.79RR225 pKa = 11.84NSALQLRR232 pKa = 11.84HH233 pKa = 6.52LEE235 pKa = 4.16LEE237 pKa = 3.98NLQTQKK243 pKa = 9.05QTDD246 pKa = 3.97KK247 pKa = 10.81IKK249 pKa = 11.22SEE251 pKa = 3.55ISKK254 pKa = 10.36IKK256 pKa = 9.86TDD258 pKa = 3.14ISLSEE263 pKa = 4.09SEE265 pKa = 4.24RR266 pKa = 11.84KK267 pKa = 9.65KK268 pKa = 10.73VEE270 pKa = 3.94QFVSQQSKK278 pKa = 10.45LFPQEE283 pKa = 3.92LQEE286 pKa = 4.63KK287 pKa = 9.06FLKK290 pKa = 10.86NEE292 pKa = 4.04LSSKK296 pKa = 10.07QSQEE300 pKa = 3.78FSNKK304 pKa = 9.54LKK306 pKa = 10.13TFDD309 pKa = 4.91LEE311 pKa = 4.24YY312 pKa = 10.97EE313 pKa = 4.11KK314 pKa = 11.14LKK316 pKa = 11.38NEE318 pKa = 4.57LKK320 pKa = 10.97LSDD323 pKa = 3.96AQLLDD328 pKa = 3.87LLRR331 pKa = 11.84VEE333 pKa = 4.66QNLKK337 pKa = 10.3IPFFGNFKK345 pKa = 10.5FYY347 pKa = 10.84TPAKK351 pKa = 9.56LKK353 pKa = 10.38EE354 pKa = 4.05NKK356 pKa = 9.52LMKK359 pKa = 10.12NQQSRR364 pKa = 11.84YY365 pKa = 9.48NIRR368 pKa = 11.84SDD370 pKa = 3.02PRR372 pKa = 11.84RR373 pKa = 11.84RR374 pKa = 11.84DD375 pKa = 3.45FMDD378 pKa = 4.4FPSYY382 pKa = 11.28VNPP385 pKa = 4.2

Molecular weight: 44.34 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

5

0

5

1588

86

582

317.6

36.93

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

4.975 ± 0.699

1.071 ± 0.385

6.108 ± 0.744

5.668 ± 1.411

5.982 ± 0.795

4.156 ± 0.79

1.889 ± 0.684

4.03 ± 0.385

6.423 ± 1.369

9.824 ± 1.029

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.204 ± 0.529

6.234 ± 0.693

4.534 ± 0.962

5.227 ± 1.23

5.227 ± 0.825

7.997 ± 1.187

5.856 ± 0.721

5.353 ± 1.07

1.259 ± 0.206

5.982 ± 1.26
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski