Cellulomonas hominis

Taxonomy:

Average proteome isoelectric point is 6.21

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 4041 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A511F851|A0A511F851_9CELL DNA-binding transcriptional MerR regulator OS=Cellulomonas hominis OX=156981 GN=CHO01_05010 PE=4 SV=1
MM1 pKa = 7.57PAGPAVAAPADD12 pKa = 3.99DD13 pKa = 4.24CAAPTRR19 pKa = 11.84TVTGSTSGAPLDD31 pKa = 3.82VAAGEE36 pKa = 4.44VVLIAGGTQSGGVNSLPAGATLCVAAGATLAPAYY70 pKa = 10.21VNNAAGTVYY79 pKa = 10.3VAPGGTASLPSIATNAGFVLDD100 pKa = 4.03NAGTTTVAGLNVNGPGTVRR119 pKa = 11.84NAAGATLAVTGQLAPAAGTVVNDD142 pKa = 3.9GTLALPGGATVNGNVSLVNNGTLTAGGTTTISGAFRR178 pKa = 11.84NAGTATLGGDD188 pKa = 3.59VIVNGGGSLHH198 pKa = 6.16NLCIIDD204 pKa = 3.8AAGGLTTNAPGSTNTGLVALGGGLQVSGSGSWSQTPTGATTATTLTDD251 pKa = 3.84DD252 pKa = 4.52GAVTGYY258 pKa = 10.57GRR260 pKa = 11.84YY261 pKa = 9.98AFTGTTSVQGTFAGDD276 pKa = 3.36LALVPIFLDD285 pKa = 3.65VPGTTFPYY293 pKa = 10.02FDD295 pKa = 3.7VVNGTVANVDD305 pKa = 3.52RR306 pKa = 11.84RR307 pKa = 11.84DD308 pKa = 3.58LTIPGPADD316 pKa = 3.62YY317 pKa = 8.01PAPDD321 pKa = 4.47CADD324 pKa = 3.64PAAPPSADD332 pKa = 3.28VQVAKK337 pKa = 9.99TGPASVLPDD346 pKa = 3.22GTLTYY351 pKa = 10.42TVTVTNAGPDD361 pKa = 3.28AAEE364 pKa = 4.64DD365 pKa = 3.73VTVTDD370 pKa = 4.11TLPPTLLDD378 pKa = 3.77PAADD382 pKa = 3.51AGGVVAGGTVTWSLGTLAAGQTVTLTASGRR412 pKa = 11.84APADD416 pKa = 3.34GTLVNVVSATSTTPDD431 pKa = 3.63PDD433 pKa = 3.23ASNNDD438 pKa = 2.82GSADD442 pKa = 3.88SEE444 pKa = 4.82TVTTDD449 pKa = 3.34VEE451 pKa = 4.36PSPPDD456 pKa = 3.38TGPPTAAPLTRR467 pKa = 11.84DD468 pKa = 4.08GPPGLPIVGVLDD480 pKa = 4.43GSSPDD485 pKa = 3.61PDD487 pKa = 3.32LQLRR491 pKa = 11.84YY492 pKa = 10.03SVVDD496 pKa = 4.07GPTSGRR502 pKa = 11.84VIALPNGLFGYY513 pKa = 10.4LPDD516 pKa = 5.26DD517 pKa = 4.24GFVGTDD523 pKa = 2.74TFTYY527 pKa = 9.86RR528 pKa = 11.84VCDD531 pKa = 3.44NQTPAEE537 pKa = 4.3CSAPATVTLIIHH549 pKa = 6.33PRR551 pKa = 11.84AVNDD555 pKa = 3.4EE556 pKa = 4.37TTTLMDD562 pKa = 3.3QPVTIDD568 pKa = 3.58VLANDD573 pKa = 4.24PGGAVLSSNLDD584 pKa = 3.16ASASHH589 pKa = 6.9GLTQIDD595 pKa = 4.53PATGTVTYY603 pKa = 9.7TPGPGYY609 pKa = 10.62LGDD612 pKa = 3.56DD613 pKa = 3.6TFVYY617 pKa = 9.91RR618 pKa = 11.84ACAPADD624 pKa = 4.07PGDD627 pKa = 3.86CALAVVVVHH636 pKa = 5.99VVPDD640 pKa = 4.03NLPPLAPPLAMEE652 pKa = 4.46TTVGAPVTGAPAVSDD667 pKa = 3.96PDD669 pKa = 3.64GDD671 pKa = 4.09AVALASVFPPTTGDD685 pKa = 3.07ATATTTTTTYY695 pKa = 9.94TPPPGFAGRR704 pKa = 11.84AVYY707 pKa = 10.09QYY709 pKa = 7.55TVCDD713 pKa = 3.87DD714 pKa = 4.1GVPVLCATGLVTVLVDD730 pKa = 4.1PVAGDD735 pKa = 4.24DD736 pKa = 4.63SATTPAGTPVTVDD749 pKa = 2.91VAANDD754 pKa = 4.08LGTVLPPDD762 pKa = 3.85VATPPANGTVALAGGALVYY781 pKa = 10.12TPAPGFVGTDD791 pKa = 2.81TFTYY795 pKa = 9.78RR796 pKa = 11.84ICADD800 pKa = 4.1DD801 pKa = 4.12VSPACDD807 pKa = 2.98TATVTVVVTGDD818 pKa = 4.11GPPVDD823 pKa = 4.98PGDD826 pKa = 4.52PGDD829 pKa = 4.34GGAGGTGGGSGTGAAPGGGGLPVTGADD856 pKa = 3.74AAPLAALAAALLAAGAAALTARR878 pKa = 11.84RR879 pKa = 11.84RR880 pKa = 11.84ATAPARR886 pKa = 11.84ARR888 pKa = 11.84RR889 pKa = 11.84PGPRR893 pKa = 11.84RR894 pKa = 3.3

Molecular weight: 86.31 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A511F8J5|A0A511F8J5_9CELL AcrR family transcriptional regulator OS=Cellulomonas hominis OX=156981 GN=CHO01_06880 PE=4 SV=1
MM1 pKa = 7.39GRR3 pKa = 11.84RR4 pKa = 11.84GSVRR8 pKa = 11.84LWGGVAFAALVLVAVGWAFAPAITLLVGVVVAALAVPVGIVLVATAALSRR58 pKa = 11.84RR59 pKa = 3.97

Molecular weight: 5.91 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

4041

0

4041

1292075

39

2005

319.7

33.79

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

15.344 ± 0.068

0.559 ± 0.009

6.441 ± 0.036

5.19 ± 0.036

2.434 ± 0.022

9.555 ± 0.037

2.019 ± 0.017

2.766 ± 0.029

1.277 ± 0.023

10.415 ± 0.049

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.574 ± 0.014

1.383 ± 0.016

6.213 ± 0.033

2.614 ± 0.021

8.1 ± 0.044

4.591 ± 0.031

6.121 ± 0.044

10.043 ± 0.04

1.556 ± 0.018

1.805 ± 0.018
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski