Amino acid dipepetide frequency for Okra leaf curl India virus [India:Sonipat EL14A:2006]

Apart from single amino acid frequencies one can also calculate so called amino acid dipeptide frequency.

There is 400 possibilites (441 if we consider Xaa as additional 21st amino acid representing all non-standard or unknown amino acids). Thus, if the dipeptides would be present randomly in proteins each amino acid dipeptide should be present with 0.25% frequency. As it is not the case in the nature, for better visablity all more than expected dipepetides are marked by red, and those which are underrepresented are marked by blue in the table.

All values are presented as per milles (‰), therefore need to be multiplied by 10-3.

For more information see sequence space article on Wikipedia.

AlaCysAspGluPheGlyHisIleLysLeuMetAsnProGlnArgSerThrValTrpTyrXaa
Ala
6.272AlaAla: 6.272 ± 3.503
0.896AlaCys: 0.896 ± 0.718
1.792AlaAsp: 1.792 ± 0.747
0.896AlaGlu: 0.896 ± 0.622
0.896AlaPhe: 0.896 ± 0.622
1.792AlaGly: 1.792 ± 0.916
2.688AlaHis: 2.688 ± 1.082
0.896AlaIle: 0.896 ± 0.981
3.584AlaLys: 3.584 ± 1.048
7.168AlaLeu: 7.168 ± 2.481
0.0AlaMet: 0.0 ± 0.0
2.688AlaAsn: 2.688 ± 1.172
2.688AlaPro: 2.688 ± 0.932
3.584AlaGln: 3.584 ± 1.143
4.48AlaArg: 4.48 ± 1.687
4.48AlaSer: 4.48 ± 2.574
2.688AlaThr: 2.688 ± 2.155
2.688AlaVal: 2.688 ± 1.192
1.792AlaTrp: 1.792 ± 1.244
0.0AlaTyr: 0.0 ± 0.0
0.0AlaXaa: 0.0 ± 0.0
Cys
0.0CysAla: 0.0 ± 0.0
0.0CysCys: 0.0 ± 0.0
0.0CysAsp: 0.0 ± 0.0
0.896CysGlu: 0.896 ± 0.718
0.896CysPhe: 0.896 ± 0.893
1.792CysGly: 1.792 ± 0.824
0.896CysHis: 0.896 ± 0.847
0.0CysIle: 0.0 ± 0.0
0.896CysLys: 0.896 ± 0.718
0.896CysLeu: 0.896 ± 0.718
0.896CysMet: 0.896 ± 0.981
1.792CysAsn: 1.792 ± 0.824
1.792CysPro: 1.792 ± 1.962
1.792CysGln: 1.792 ± 0.747
2.688CysArg: 2.688 ± 1.827
5.376CysSer: 5.376 ± 2.195
2.688CysThr: 2.688 ± 1.197
0.896CysVal: 0.896 ± 0.718
0.0CysTrp: 0.0 ± 0.0
0.0CysTyr: 0.0 ± 0.0
0.0CysXaa: 0.0 ± 0.0
Asp
4.48AspAla: 4.48 ± 2.308
0.0AspCys: 0.0 ± 0.0
2.688AspAsp: 2.688 ± 0.975
1.792AspGlu: 1.792 ± 0.824
0.896AspPhe: 0.896 ± 0.718
1.792AspGly: 1.792 ± 1.244
0.0AspHis: 0.0 ± 0.0
4.48AspIle: 4.48 ± 2.065
1.792AspLys: 1.792 ± 0.747
6.272AspLeu: 6.272 ± 2.004
0.0AspMet: 0.0 ± 0.0
3.584AspAsn: 3.584 ± 1.542
2.688AspPro: 2.688 ± 1.011
2.688AspGln: 2.688 ± 0.708
2.688AspArg: 2.688 ± 1.328
4.48AspSer: 4.48 ± 1.206
2.688AspThr: 2.688 ± 1.269
3.584AspVal: 3.584 ± 1.495
1.792AspTrp: 1.792 ± 0.824
0.896AspTyr: 0.896 ± 0.622
0.0AspXaa: 0.0 ± 0.0
Glu
7.168GluAla: 7.168 ± 1.868
0.896GluCys: 0.896 ± 0.847
0.896GluAsp: 0.896 ± 0.847
5.376GluGlu: 5.376 ± 2.895
4.48GluPhe: 4.48 ± 1.702
4.48GluGly: 4.48 ± 1.118
1.792GluHis: 1.792 ± 1.271
0.0GluIle: 0.0 ± 0.0
0.0GluLys: 0.0 ± 0.0
4.48GluLeu: 4.48 ± 1.773
0.0GluMet: 0.0 ± 0.0
2.688GluAsn: 2.688 ± 1.172
1.792GluPro: 1.792 ± 0.747
0.896GluGln: 0.896 ± 0.718
0.896GluArg: 0.896 ± 0.893
3.584GluSer: 3.584 ± 1.599
1.792GluThr: 1.792 ± 0.948
2.688GluVal: 2.688 ± 0.708
2.688GluTrp: 2.688 ± 1.19
0.896GluTyr: 0.896 ± 0.981
0.0GluXaa: 0.0 ± 0.0
Phe
0.0PheAla: 0.0 ± 0.0
0.896PheCys: 0.896 ± 0.718
4.48PheAsp: 4.48 ± 2.031
0.896PheGlu: 0.896 ± 0.622
1.792PhePhe: 1.792 ± 0.747
0.896PheGly: 0.896 ± 0.718
1.792PheHis: 1.792 ± 1.244
0.896PheIle: 0.896 ± 0.893
3.584PheLys: 3.584 ± 2.52
7.168PheLeu: 7.168 ± 1.854
0.896PheMet: 0.896 ± 0.622
3.584PheAsn: 3.584 ± 1.5
1.792PhePro: 1.792 ± 0.948
2.688PheGln: 2.688 ± 1.19
2.688PheArg: 2.688 ± 1.647
2.688PheSer: 2.688 ± 1.552
2.688PheThr: 2.688 ± 1.237
1.792PheVal: 1.792 ± 0.747
0.0PheTrp: 0.0 ± 0.0
1.792PheTyr: 1.792 ± 1.08
0.0PheXaa: 0.0 ± 0.0
Gly
1.792GlyAla: 1.792 ± 0.948
2.688GlyCys: 2.688 ± 1.253
2.688GlyAsp: 2.688 ± 1.336
4.48GlyGlu: 4.48 ± 1.018
1.792GlyPhe: 1.792 ± 1.228
3.584GlyGly: 3.584 ± 1.048
2.688GlyHis: 2.688 ± 0.841
2.688GlyIle: 2.688 ± 0.841
4.48GlyLys: 4.48 ± 1.865
1.792GlyLeu: 1.792 ± 0.931
0.896GlyMet: 0.896 ± 0.981
1.792GlyAsn: 1.792 ± 1.634
3.584GlyPro: 3.584 ± 1.721
3.584GlyGln: 3.584 ± 1.048
0.896GlyArg: 0.896 ± 0.622
4.48GlySer: 4.48 ± 1.95
2.688GlyThr: 2.688 ± 0.975
2.688GlyVal: 2.688 ± 2.68
0.0GlyTrp: 0.0 ± 0.0
0.896GlyTyr: 0.896 ± 0.981
0.0GlyXaa: 0.0 ± 0.0
His
1.792HisAla: 1.792 ± 1.437
1.792HisCys: 1.792 ± 1.228
1.792HisAsp: 1.792 ± 1.271
0.896HisGlu: 0.896 ± 0.622
2.688HisPhe: 2.688 ± 1.269
2.688HisGly: 2.688 ± 1.868
1.792HisHis: 1.792 ± 1.694
1.792HisIle: 1.792 ± 0.916
1.792HisLys: 1.792 ± 1.411
2.688HisLeu: 2.688 ± 1.865
0.896HisMet: 0.896 ± 0.718
3.584HisAsn: 3.584 ± 1.649
1.792HisPro: 1.792 ± 0.882
0.0HisGln: 0.0 ± 0.0
5.376HisArg: 5.376 ± 2.466
1.792HisSer: 1.792 ± 1.271
1.792HisThr: 1.792 ± 1.437
2.688HisVal: 2.688 ± 1.233
0.0HisTrp: 0.0 ± 0.0
0.896HisTyr: 0.896 ± 0.622
0.0HisXaa: 0.0 ± 0.0
Ile
0.0IleAla: 0.0 ± 0.0
3.584IleCys: 3.584 ± 1.389
2.688IleAsp: 2.688 ± 1.865
0.896IleGlu: 0.896 ± 0.622
1.792IlePhe: 1.792 ± 1.244
1.792IleGly: 1.792 ± 1.437
0.896IleHis: 0.896 ± 0.847
1.792IleIle: 1.792 ± 0.882
8.065IleLys: 8.065 ± 1.606
1.792IleLeu: 1.792 ± 1.411
0.0IleMet: 0.0 ± 0.0
3.584IleAsn: 3.584 ± 1.805
0.896IlePro: 0.896 ± 0.622
5.376IleGln: 5.376 ± 1.689
2.688IleArg: 2.688 ± 1.311
5.376IleSer: 5.376 ± 2.093
2.688IleThr: 2.688 ± 2.148
1.792IleVal: 1.792 ± 0.747
1.792IleTrp: 1.792 ± 1.787
1.792IleTyr: 1.792 ± 1.437
0.0IleXaa: 0.0 ± 0.0
Lys
2.688LysAla: 2.688 ± 1.663
2.688LysCys: 2.688 ± 1.237
1.792LysAsp: 1.792 ± 1.244
4.48LysGlu: 4.48 ± 2.308
1.792LysPhe: 1.792 ± 0.931
2.688LysGly: 2.688 ± 1.011
0.896LysHis: 0.896 ± 0.622
3.584LysIle: 3.584 ± 0.966
1.792LysLys: 1.792 ± 0.747
0.896LysLeu: 0.896 ± 0.893
0.0LysMet: 0.0 ± 0.0
6.272LysAsn: 6.272 ± 2.589
2.688LysPro: 2.688 ± 1.328
0.0LysGln: 0.0 ± 0.0
4.48LysArg: 4.48 ± 1.791
6.272LysSer: 6.272 ± 1.207
2.688LysThr: 2.688 ± 0.708
5.376LysVal: 5.376 ± 2.643
0.896LysTrp: 0.896 ± 0.718
5.376LysTyr: 5.376 ± 1.274
0.0LysXaa: 0.0 ± 0.0
Leu
1.792LeuAla: 1.792 ± 0.948
1.792LeuCys: 1.792 ± 1.244
2.688LeuAsp: 2.688 ± 1.19
4.48LeuGlu: 4.48 ± 1.692
1.792LeuPhe: 1.792 ± 1.271
3.584LeuGly: 3.584 ± 1.805
2.688LeuHis: 2.688 ± 1.237
5.376LeuIle: 5.376 ± 1.719
5.376LeuLys: 5.376 ± 1.221
2.688LeuLeu: 2.688 ± 1.92
0.896LeuMet: 0.896 ± 0.718
7.168LeuAsn: 7.168 ± 1.417
0.896LeuPro: 0.896 ± 0.847
2.688LeuGln: 2.688 ± 1.011
6.272LeuArg: 6.272 ± 2.39
5.376LeuSer: 5.376 ± 0.788
7.168LeuThr: 7.168 ± 1.512
3.584LeuVal: 3.584 ± 1.121
0.0LeuTrp: 0.0 ± 0.0
5.376LeuTyr: 5.376 ± 2.372
0.0LeuXaa: 0.0 ± 0.0
Met
0.896MetAla: 0.896 ± 0.718
0.0MetCys: 0.0 ± 0.0
1.792MetAsp: 1.792 ± 1.787
0.896MetGlu: 0.896 ± 0.622
1.792MetPhe: 1.792 ± 1.437
1.792MetGly: 1.792 ± 1.02
0.0MetHis: 0.0 ± 0.0
0.0MetIle: 0.0 ± 0.0
0.0MetLys: 0.0 ± 0.0
1.792MetLeu: 1.792 ± 1.08
0.896MetMet: 0.896 ± 0.841
0.0MetAsn: 0.0 ± 0.0
0.896MetPro: 0.896 ± 0.622
0.896MetGln: 0.896 ± 0.847
0.896MetArg: 0.896 ± 0.893
0.896MetSer: 0.896 ± 0.718
0.0MetThr: 0.0 ± 0.0
0.0MetVal: 0.0 ± 0.0
2.688MetTrp: 2.688 ± 0.872
2.688MetTyr: 2.688 ± 1.402
0.0MetXaa: 0.0 ± 0.0
Asn
3.584AsnAla: 3.584 ± 1.721
0.896AsnCys: 0.896 ± 0.847
2.688AsnAsp: 2.688 ± 1.172
3.584AsnGlu: 3.584 ± 1.846
1.792AsnPhe: 1.792 ± 0.747
2.688AsnGly: 2.688 ± 1.237
4.48AsnHis: 4.48 ± 1.167
1.792AsnIle: 1.792 ± 0.747
0.0AsnLys: 0.0 ± 0.0
8.065AsnLeu: 8.065 ± 3.298
3.584AsnMet: 3.584 ± 1.488
2.688AsnAsn: 2.688 ± 1.241
7.168AsnPro: 7.168 ± 1.966
2.688AsnGln: 2.688 ± 1.237
3.584AsnArg: 3.584 ± 1.383
3.584AsnSer: 3.584 ± 1.495
0.896AsnThr: 0.896 ± 0.817
3.584AsnVal: 3.584 ± 2.046
0.0AsnTrp: 0.0 ± 0.0
3.584AsnTyr: 3.584 ± 0.966
0.0AsnXaa: 0.0 ± 0.0
Pro
2.688ProAla: 2.688 ± 1.564
1.792ProCys: 1.792 ± 1.08
1.792ProAsp: 1.792 ± 1.08
2.688ProGlu: 2.688 ± 1.827
1.792ProPhe: 1.792 ± 0.882
0.896ProGly: 0.896 ± 0.622
4.48ProHis: 4.48 ± 2.313
1.792ProIle: 1.792 ± 1.694
3.584ProLys: 3.584 ± 2.487
3.584ProLeu: 3.584 ± 1.32
1.792ProMet: 1.792 ± 0.749
4.48ProAsn: 4.48 ± 1.703
2.688ProPro: 2.688 ± 1.237
5.376ProGln: 5.376 ± 1.876
4.48ProArg: 4.48 ± 2.181
6.272ProSer: 6.272 ± 2.981
6.272ProThr: 6.272 ± 2.3
4.48ProVal: 4.48 ± 1.294
0.0ProTrp: 0.0 ± 0.0
0.896ProTyr: 0.896 ± 0.718
0.0ProXaa: 0.0 ± 0.0
Gln
2.688GlnAla: 2.688 ± 1.703
0.0GlnCys: 0.0 ± 0.0
1.792GlnAsp: 1.792 ± 1.08
1.792GlnGlu: 1.792 ± 0.747
2.688GlnPhe: 2.688 ± 1.237
1.792GlnGly: 1.792 ± 1.244
2.688GlnHis: 2.688 ± 1.781
2.688GlnIle: 2.688 ± 1.19
0.896GlnLys: 0.896 ± 0.981
1.792GlnLeu: 1.792 ± 1.228
0.0GlnMet: 0.0 ± 0.0
4.48GlnAsn: 4.48 ± 1.467
5.376GlnPro: 5.376 ± 2.346
3.584GlnGln: 3.584 ± 1.813
4.48GlnArg: 4.48 ± 1.703
4.48GlnSer: 4.48 ± 1.505
3.584GlnThr: 3.584 ± 1.35
3.584GlnVal: 3.584 ± 0.866
0.0GlnTrp: 0.0 ± 0.0
1.792GlnTyr: 1.792 ± 0.931
0.0GlnXaa: 0.0 ± 0.0
Arg
1.792ArgAla: 1.792 ± 1.044
3.584ArgCys: 3.584 ± 2.456
3.584ArgAsp: 3.584 ± 1.286
4.48ArgGlu: 4.48 ± 0.953
2.688ArgPhe: 2.688 ± 1.172
4.48ArgGly: 4.48 ± 1.324
1.792ArgHis: 1.792 ± 1.962
6.272ArgIle: 6.272 ± 2.301
4.48ArgLys: 4.48 ± 2.118
3.584ArgLeu: 3.584 ± 1.763
1.792ArgMet: 1.792 ± 1.437
0.896ArgAsn: 0.896 ± 0.981
5.376ArgPro: 5.376 ± 1.663
2.688ArgGln: 2.688 ± 1.422
3.584ArgArg: 3.584 ± 2.22
5.376ArgSer: 5.376 ± 2.016
3.584ArgThr: 3.584 ± 1.754
5.376ArgVal: 5.376 ± 1.66
0.0ArgTrp: 0.0 ± 0.0
1.792ArgTyr: 1.792 ± 1.08
0.0ArgXaa: 0.0 ± 0.0
Ser
5.376SerAla: 5.376 ± 2.199
1.792SerCys: 1.792 ± 1.962
6.272SerAsp: 6.272 ± 1.105
3.584SerGlu: 3.584 ± 1.143
4.48SerPhe: 4.48 ± 1.496
4.48SerGly: 4.48 ± 1.179
1.792SerHis: 1.792 ± 1.044
5.376SerIle: 5.376 ± 1.883
7.168SerLys: 7.168 ± 1.597
3.584SerLeu: 3.584 ± 1.213
0.0SerMet: 0.0 ± 0.812
3.584SerAsn: 3.584 ± 0.914
8.961SerPro: 8.961 ± 1.718
2.688SerGln: 2.688 ± 0.975
5.376SerArg: 5.376 ± 0.823
14.337SerSer: 14.337 ± 4.665
8.065SerThr: 8.065 ± 2.665
1.792SerVal: 1.792 ± 1.437
0.0SerTrp: 0.0 ± 0.0
2.688SerTyr: 2.688 ± 1.19
0.0SerXaa: 0.0 ± 0.0
Thr
2.688ThrAla: 2.688 ± 0.708
0.896ThrCys: 0.896 ± 0.817
0.896ThrAsp: 0.896 ± 0.817
0.896ThrGlu: 0.896 ± 0.981
0.896ThrPhe: 0.896 ± 0.893
4.48ThrGly: 4.48 ± 1.552
3.584ThrHis: 3.584 ± 1.632
1.792ThrIle: 1.792 ± 1.244
3.584ThrLys: 3.584 ± 1.495
4.48ThrLeu: 4.48 ± 1.586
2.688ThrMet: 2.688 ± 1.663
5.376ThrAsn: 5.376 ± 1.643
4.48ThrPro: 4.48 ± 1.007
4.48ThrGln: 4.48 ± 1.018
3.584ThrArg: 3.584 ± 1.641
4.48ThrSer: 4.48 ± 2.504
2.688ThrThr: 2.688 ± 1.98
4.48ThrVal: 4.48 ± 2.574
0.896ThrTrp: 0.896 ± 0.817
1.792ThrTyr: 1.792 ± 0.916
0.0ThrXaa: 0.0 ± 0.0
Val
0.896ValAla: 0.896 ± 0.718
0.0ValCys: 0.0 ± 0.0
4.48ValAsp: 4.48 ± 0.857
3.584ValGlu: 3.584 ± 2.046
4.48ValPhe: 4.48 ± 1.005
2.688ValGly: 2.688 ± 1.934
2.688ValHis: 2.688 ± 1.233
6.272ValIle: 6.272 ± 2.07
4.48ValLys: 4.48 ± 2.696
4.48ValLeu: 4.48 ± 1.429
0.896ValMet: 0.896 ± 0.718
0.896ValAsn: 0.896 ± 0.718
4.48ValPro: 4.48 ± 1.005
2.688ValGln: 2.688 ± 1.253
2.688ValArg: 2.688 ± 2.155
2.688ValSer: 2.688 ± 1.336
3.584ValThr: 3.584 ± 2.873
1.792ValVal: 1.792 ± 0.747
0.0ValTrp: 0.0 ± 0.0
3.584ValTyr: 3.584 ± 1.495
0.0ValXaa: 0.0 ± 0.0
Trp
3.584TrpAla: 3.584 ± 1.721
0.0TrpCys: 0.0 ± 0.0
0.896TrpAsp: 0.896 ± 0.981
0.896TrpGlu: 0.896 ± 0.893
0.896TrpPhe: 0.896 ± 0.622
0.896TrpGly: 0.896 ± 0.622
0.896TrpHis: 0.896 ± 0.718
0.0TrpIle: 0.0 ± 0.0
0.0TrpLys: 0.0 ± 0.0
0.0TrpLeu: 0.0 ± 0.0
0.0TrpMet: 0.0 ± 0.0
0.0TrpAsn: 0.0 ± 0.0
0.0TrpPro: 0.0 ± 0.0
0.896TrpGln: 0.896 ± 0.622
0.896TrpArg: 0.896 ± 0.847
1.792TrpSer: 1.792 ± 1.097
0.896TrpThr: 0.896 ± 0.893
0.0TrpVal: 0.0 ± 0.0
0.0TrpTrp: 0.0 ± 0.0
0.0TrpTyr: 0.0 ± 0.0
0.0TrpXaa: 0.0 ± 0.0
Tyr
1.792TyrAla: 1.792 ± 1.437
0.0TyrCys: 0.0 ± 0.0
3.584TyrAsp: 3.584 ± 2.162
0.0TyrGlu: 0.0 ± 0.0
2.688TyrPhe: 2.688 ± 0.708
0.896TyrGly: 0.896 ± 0.622
0.0TyrHis: 0.0 ± 0.0
1.792TyrIle: 1.792 ± 1.244
1.792TyrLys: 1.792 ± 1.244
4.48TyrLeu: 4.48 ± 1.844
1.792TyrMet: 1.792 ± 0.916
1.792TyrAsn: 1.792 ± 1.787
1.792TyrPro: 1.792 ± 0.948
0.896TyrGln: 0.896 ± 0.718
4.48TyrArg: 4.48 ± 2.222
4.48TyrSer: 4.48 ± 0.944
0.0TyrThr: 0.0 ± 0.0
4.48TyrVal: 4.48 ± 0.944
0.0TyrTrp: 0.0 ± 0.0
0.896TyrTyr: 0.896 ± 0.847
0.0TyrXaa: 0.0 ± 0.0
Xaa
0.0XaaAla: 0.0 ± 0.0
0.0XaaCys: 0.0 ± 0.0
0.0XaaAsp: 0.0 ± 0.0
0.0XaaGlu: 0.0 ± 0.0
0.0XaaPhe: 0.0 ± 0.0
0.0XaaGly: 0.0 ± 0.0
0.0XaaHis: 0.0 ± 0.0
0.0XaaIle: 0.0 ± 0.0
0.0XaaLys: 0.0 ± 0.0
0.0XaaLeu: 0.0 ± 0.0
0.0XaaMet: 0.0 ± 0.0
0.0XaaAsn: 0.0 ± 0.0
0.0XaaPro: 0.0 ± 0.0
0.0XaaGln: 0.0 ± 0.0
0.0XaaArg: 0.0 ± 0.0
0.0XaaSer: 0.0 ± 0.0
0.0XaaThr: 0.0 ± 0.0
0.0XaaVal: 0.0 ± 0.0
0.0XaaTrp: 0.0 ± 0.0
0.0XaaTyr: 0.0 ± 0.0
0.0XaaXaa: 0.0 ± 0.0
Statistics based on 6 proteins (1117 amino acids)

Note: The error has been estimated with the bootstraping (x100) at the protein level

Above dipeptide statistics (among other stats for this proteome) you can download from this CSV file
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski