Eidolon helvum papillomavirus 1

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Papovaviricetes; Zurhausenvirales; Papillomaviridae; Firstpapillomavirinae; Dyoupsilonpapillomavirus; Dyoupsilonpapillomavirus 1

Average proteome isoelectric point is 6.0

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 6 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|S4TH86|S4TH86_9PAPI Protein E7 OS=Eidolon helvum papillomavirus 1 OX=1163701 GN=E7 PE=3 SV=1
MM1 pKa = 7.8RR2 pKa = 11.84IEE4 pKa = 4.63LPSLQEE10 pKa = 4.25LVSQEE15 pKa = 3.81NPEE18 pKa = 4.39AVDD21 pKa = 3.91LNCYY25 pKa = 10.29EE26 pKa = 4.24IMSSDD31 pKa = 3.56EE32 pKa = 4.26EE33 pKa = 4.37EE34 pKa = 4.28VDD36 pKa = 4.15EE37 pKa = 4.65EE38 pKa = 4.45LPLYY42 pKa = 10.51SVAVHH47 pKa = 6.58CGSCRR52 pKa = 11.84RR53 pKa = 11.84RR54 pKa = 11.84VRR56 pKa = 11.84LFCAASRR63 pKa = 11.84EE64 pKa = 4.17ALHH67 pKa = 7.04LLEE70 pKa = 5.54CLLFEE75 pKa = 5.53DD76 pKa = 5.64LLAFLCPGCALAGEE90 pKa = 4.86DD91 pKa = 4.44GGG93 pKa = 4.68

Molecular weight: 10.33 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|S4TH17|S4TH17_9PAPI Protein E6 OS=Eidolon helvum papillomavirus 1 OX=1163701 GN=E6 PE=3 SV=1
MM1 pKa = 6.96EE2 pKa = 4.5TEE4 pKa = 4.1KK5 pKa = 10.83LAKK8 pKa = 9.83RR9 pKa = 11.84LSSLEE14 pKa = 3.95EE15 pKa = 4.21EE16 pKa = 4.45ILRR19 pKa = 11.84HH20 pKa = 4.99YY21 pKa = 10.71EE22 pKa = 3.83KK23 pKa = 10.58DD24 pKa = 3.45SKK26 pKa = 11.01RR27 pKa = 11.84LEE29 pKa = 3.96DD30 pKa = 5.64QIRR33 pKa = 11.84FWNLMRR39 pKa = 11.84RR40 pKa = 11.84EE41 pKa = 3.89QALMHH46 pKa = 6.85FIRR49 pKa = 11.84KK50 pKa = 8.93QGVHH54 pKa = 5.5RR55 pKa = 11.84VGLRR59 pKa = 11.84PIPSLMASEE68 pKa = 5.32AEE70 pKa = 3.88AKK72 pKa = 10.17KK73 pKa = 10.28AIEE76 pKa = 4.11MEE78 pKa = 4.37VVLTSLSKK86 pKa = 10.67SQFAFEE92 pKa = 4.25SWGLRR97 pKa = 11.84DD98 pKa = 4.12TSWEE102 pKa = 4.11LYY104 pKa = 9.42KK105 pKa = 10.86APPEE109 pKa = 4.12NTLKK113 pKa = 10.83KK114 pKa = 10.4YY115 pKa = 9.02GQQVEE120 pKa = 4.45LTYY123 pKa = 11.42DD124 pKa = 3.56NDD126 pKa = 3.88PDD128 pKa = 3.68NRR130 pKa = 11.84SAEE133 pKa = 4.32TLWGGLYY140 pKa = 10.09IMYY143 pKa = 10.51EE144 pKa = 3.74NDD146 pKa = 2.71DD147 pKa = 3.44WRR149 pKa = 11.84RR150 pKa = 11.84VTSAVDD156 pKa = 3.22EE157 pKa = 4.37KK158 pKa = 11.18GIYY161 pKa = 9.63YY162 pKa = 10.06VDD164 pKa = 3.84PDD166 pKa = 3.89GLRR169 pKa = 11.84IYY171 pKa = 10.25YY172 pKa = 10.64VNFEE176 pKa = 4.38ALADD180 pKa = 4.39RR181 pKa = 11.84YY182 pKa = 10.83GSTGAYY188 pKa = 9.34KK189 pKa = 10.92VMAGSDD195 pKa = 4.26LIAVVGSDD203 pKa = 3.55TDD205 pKa = 4.45SEE207 pKa = 4.48DD208 pKa = 3.23TTAPDD213 pKa = 3.82APSIAARR220 pKa = 11.84RR221 pKa = 11.84VSSPQTPKK229 pKa = 10.49PSPKK233 pKa = 8.85KK234 pKa = 8.57TPPRR238 pKa = 11.84KK239 pKa = 7.86PPRR242 pKa = 11.84RR243 pKa = 11.84RR244 pKa = 11.84RR245 pKa = 11.84VSTPTRR251 pKa = 11.84RR252 pKa = 11.84QRR254 pKa = 11.84RR255 pKa = 11.84GEE257 pKa = 3.87PGSRR261 pKa = 11.84NRR263 pKa = 11.84RR264 pKa = 11.84GARR267 pKa = 11.84ATAGCTRR274 pKa = 11.84GEE276 pKa = 4.38CTPPSPSQVGRR287 pKa = 11.84RR288 pKa = 11.84HH289 pKa = 5.85QSTPPKK295 pKa = 10.28NLGRR299 pKa = 11.84LGRR302 pKa = 11.84LLAEE306 pKa = 5.11AYY308 pKa = 8.96DD309 pKa = 4.18PPILVCRR316 pKa = 11.84GAANTLKK323 pKa = 9.98CLRR326 pKa = 11.84YY327 pKa = 9.22RR328 pKa = 11.84VHH330 pKa = 7.07LKK332 pKa = 10.49HH333 pKa = 6.84SNLYY337 pKa = 9.13DD338 pKa = 3.75TVSTTWNWTKK348 pKa = 10.83GSYY351 pKa = 8.08PQSRR355 pKa = 11.84IIYY358 pKa = 8.36LFNSKK363 pKa = 8.95HH364 pKa = 4.29QRR366 pKa = 11.84EE367 pKa = 4.5SFLEE371 pKa = 4.18HH372 pKa = 5.86VKK374 pKa = 10.88LPASVTHH381 pKa = 5.22YY382 pKa = 9.92TGFLNGII389 pKa = 4.22

Molecular weight: 44.39 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

6

0

6

2311

93

640

385.2

43.45

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.928 ± 0.27

1.861 ± 0.691

6.145 ± 0.297

7.14 ± 0.427

4.414 ± 0.591

6.621 ± 0.499

2.077 ± 0.155

4.717 ± 0.768

5.019 ± 0.719

8.135 ± 0.747

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.688 ± 0.297

3.721 ± 0.667

6.318 ± 0.884

4.37 ± 0.518

6.707 ± 0.764

6.404 ± 0.634

7.572 ± 0.864

6.491 ± 0.786

1.255 ± 0.33

3.418 ± 0.361
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski