Acinetobacter phage SH-Ab 15497

Taxonomy: Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae

Average proteome isoelectric point is 6.08

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 58 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A2H5BHK5|A0A2H5BHK5_9CAUD Uncharacterized protein OS=Acinetobacter phage SH-Ab 15497 OX=2060946 GN=SHab15497_00049 PE=4 SV=1
MM1 pKa = 7.43TFDD4 pKa = 4.15TNPTCPYY11 pKa = 8.76CDD13 pKa = 3.44HH14 pKa = 6.85VVDD17 pKa = 5.88SDD19 pKa = 5.4LADD22 pKa = 3.12LWEE25 pKa = 4.52YY26 pKa = 10.8EE27 pKa = 4.64GEE29 pKa = 4.28DD30 pKa = 4.47NPYY33 pKa = 10.64EE34 pKa = 4.31CPNCEE39 pKa = 4.46KK40 pKa = 10.81EE41 pKa = 4.91LILNVQVTTEE51 pKa = 4.18YY52 pKa = 9.93EE53 pKa = 4.21LKK55 pKa = 10.5RR56 pKa = 11.84VEE58 pKa = 4.61CDD60 pKa = 3.67DD61 pKa = 5.11DD62 pKa = 3.7KK63 pKa = 11.79HH64 pKa = 7.43EE65 pKa = 4.3YY66 pKa = 10.74DD67 pKa = 3.02EE68 pKa = 4.09WTRR71 pKa = 11.84IDD73 pKa = 3.49VSQRR77 pKa = 11.84LLDD80 pKa = 4.25DD81 pKa = 3.74WAKK84 pKa = 10.83DD85 pKa = 3.58PAMSRR90 pKa = 11.84YY91 pKa = 9.9ADD93 pKa = 3.84EE94 pKa = 5.69KK95 pKa = 8.5PHH97 pKa = 5.29SWYY100 pKa = 9.79IRR102 pKa = 11.84EE103 pKa = 4.78CKK105 pKa = 10.35HH106 pKa = 6.84CDD108 pKa = 3.35DD109 pKa = 4.81KK110 pKa = 11.65DD111 pKa = 3.89YY112 pKa = 11.16SIQYY116 pKa = 9.18EE117 pKa = 4.29YY118 pKa = 10.18QQEE121 pKa = 4.39VPQDD125 pKa = 4.04EE126 pKa = 4.47IKK128 pKa = 10.82SRR130 pKa = 11.84YY131 pKa = 9.91DD132 pKa = 3.07KK133 pKa = 11.65DD134 pKa = 3.46EE135 pKa = 3.88

Molecular weight: 16.37 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A2H5BHH2|A0A2H5BHH2_9CAUD Uncharacterized protein OS=Acinetobacter phage SH-Ab 15497 OX=2060946 GN=SHab15497_00004 PE=4 SV=1
MM1 pKa = 6.92GQWEE5 pKa = 4.18VDD7 pKa = 3.23MRR9 pKa = 11.84RR10 pKa = 11.84LKK12 pKa = 11.04GLTEE16 pKa = 3.81AKK18 pKa = 8.93MVKK21 pKa = 9.41VLKK24 pKa = 9.79IAAMEE29 pKa = 4.08TMRR32 pKa = 11.84DD33 pKa = 3.67VIMDD37 pKa = 4.0TPVDD41 pKa = 3.54TGRR44 pKa = 11.84LRR46 pKa = 11.84GNWQVGIGQKK56 pKa = 10.47EE57 pKa = 4.16SGQLSVLDD65 pKa = 4.18PNGGITIARR74 pKa = 11.84ITSKK78 pKa = 10.59LVQINKK84 pKa = 9.34NDD86 pKa = 3.97TIVFYY91 pKa = 11.61NNLPYY96 pKa = 10.36AYY98 pKa = 8.86PIEE101 pKa = 4.83FGHH104 pKa = 6.21SAVKK108 pKa = 10.39APQGMVRR115 pKa = 11.84KK116 pKa = 10.16NIANWGGRR124 pKa = 11.84VARR127 pKa = 11.84IARR130 pKa = 11.84VVKK133 pKa = 10.52NEE135 pKa = 3.74RR136 pKa = 11.84AA137 pKa = 3.27

Molecular weight: 15.28 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

58

0

58

13327

42

1018

229.8

25.77

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.939 ± 0.433

1.148 ± 0.163

6.543 ± 0.221

7.181 ± 0.304

3.489 ± 0.179

7.173 ± 0.286

2.124 ± 0.245

6.19 ± 0.25

6.581 ± 0.365

7.654 ± 0.27

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

3.129 ± 0.138

4.547 ± 0.178

4.044 ± 0.282

3.797 ± 0.174

5.035 ± 0.196

5.823 ± 0.278

5.823 ± 0.336

6.671 ± 0.284

1.598 ± 0.119

3.512 ± 0.226
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski