Streptococcus phage CHPC926

Taxonomy: Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae

Average proteome isoelectric point is 6.58

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 44 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1L2JXR3|A0A1L2JXR3_9CAUD Uncharacterized protein OS=Streptococcus phage CHPC926 OX=1913082 GN=CHPC926_0037 PE=4 SV=1
MM1 pKa = 7.13VNWVDD6 pKa = 4.56ANGNDD11 pKa = 4.18LPDD14 pKa = 4.84GADD17 pKa = 3.18QDD19 pKa = 4.63FKK21 pKa = 11.75AGMFFSFAGDD31 pKa = 3.45EE32 pKa = 4.32VNITDD37 pKa = 3.77TGEE40 pKa = 3.65GGYY43 pKa = 10.61YY44 pKa = 9.76GGYY47 pKa = 8.0YY48 pKa = 9.41YY49 pKa = 10.76RR50 pKa = 11.84RR51 pKa = 11.84FEE53 pKa = 4.06FGQFGTVWLSCWNKK67 pKa = 10.66DD68 pKa = 3.89DD69 pKa = 5.14LVNYY73 pKa = 7.38YY74 pKa = 8.26QQ75 pKa = 4.22

Molecular weight: 8.61 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1L2JXQ8|A0A1L2JXQ8_9CAUD Uncharacterized protein OS=Streptococcus phage CHPC926 OX=1913082 GN=CHPC926_0014 PE=4 SV=1
MM1 pKa = 7.56SKK3 pKa = 9.22TKK5 pKa = 10.5RR6 pKa = 11.84GVCANCHH13 pKa = 4.61TVFEE17 pKa = 4.53VSKK20 pKa = 10.01KK21 pKa = 6.75QRR23 pKa = 11.84RR24 pKa = 11.84KK25 pKa = 8.8IKK27 pKa = 8.88EE28 pKa = 4.09GKK30 pKa = 9.71SVFCSEE36 pKa = 4.16TCSLEE41 pKa = 4.41KK42 pKa = 10.69YY43 pKa = 9.93GKK45 pKa = 8.13TKK47 pKa = 9.25ITISEE52 pKa = 4.09IPP54 pKa = 3.22

Molecular weight: 6.12 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

44

0

44

8861

46

910

201.4

22.83

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.489 ± 0.42

0.756 ± 0.12

6.083 ± 0.257

7.46 ± 0.645

4.435 ± 0.227

6.196 ± 0.565

1.174 ± 0.127

6.85 ± 0.476

8.961 ± 0.521

7.877 ± 0.407

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.472 ± 0.168

6.489 ± 0.568

2.562 ± 0.162

4.334 ± 0.261

3.814 ± 0.332

6.376 ± 0.337

6.5 ± 0.256

6.004 ± 0.27

1.219 ± 0.113

3.95 ± 0.287
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski