Erysipelothrix phage phi1605

Taxonomy: Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae

Average proteome isoelectric point is 5.99

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 84 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A2K5B294|A0A2K5B294_9CAUD Major tail protein OS=Erysipelothrix phage phi1605 OX=2006938 GN=SER90K_49 PE=4 SV=1
MM1 pKa = 7.7SILEE5 pKa = 4.28DD6 pKa = 3.6LQVVLEE12 pKa = 4.23TLDD15 pKa = 3.46VPIEE19 pKa = 3.92IGVFSDD25 pKa = 3.7VAPGKK30 pKa = 10.83YY31 pKa = 8.43MVIVPMSDD39 pKa = 3.1SFDD42 pKa = 3.48LHH44 pKa = 7.69SDD46 pKa = 3.48NLPCMDD52 pKa = 3.52VQEE55 pKa = 4.49ARR57 pKa = 11.84ISIYY61 pKa = 11.02SKK63 pKa = 11.04GSYY66 pKa = 8.2TALKK70 pKa = 9.15NQVVQLLLDD79 pKa = 3.5SSFTITARR87 pKa = 11.84SYY89 pKa = 10.9IGFEE93 pKa = 4.5DD94 pKa = 3.49DD95 pKa = 2.56TGYY98 pKa = 11.04YY99 pKa = 9.56HH100 pKa = 7.27YY101 pKa = 11.1NVDD104 pKa = 3.47VAKK107 pKa = 10.29HH108 pKa = 4.82YY109 pKa = 10.36EE110 pKa = 3.76IGGNN114 pKa = 3.43

Molecular weight: 12.73 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A2K5B267|A0A2K5B267_9CAUD Uncharacterized protein OS=Erysipelothrix phage phi1605 OX=2006938 GN=SER90K_19 PE=4 SV=1
MM1 pKa = 6.75VGKK4 pKa = 10.14RR5 pKa = 11.84GEE7 pKa = 3.97IHH9 pKa = 5.23GQEE12 pKa = 3.9YY13 pKa = 9.48KK14 pKa = 11.32ANIKK18 pKa = 8.25TSCYY22 pKa = 10.04GKK24 pKa = 7.81TAKK27 pKa = 10.22SVAGSALAQTKK38 pKa = 9.61TSGKK42 pKa = 10.3

Molecular weight: 4.39 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

84

0

84

26662

42

1087

317.4

36.02

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.237 ± 0.287

0.971 ± 0.109

6.642 ± 0.18

7.655 ± 0.207

3.976 ± 0.14

6.151 ± 0.195

1.515 ± 0.081

7.674 ± 0.221

7.951 ± 0.306

8.732 ± 0.262

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.412 ± 0.105

5.513 ± 0.173

3.162 ± 0.118

3.248 ± 0.149

4.52 ± 0.19

6.339 ± 0.196

5.645 ± 0.206

6.215 ± 0.189

1.125 ± 0.112

4.317 ± 0.194
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski