Lactobacillus phage Satyr

Taxonomy: Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Tybeckvirinae; Maenadvirus; Lactobacillus virus Satyr

Average proteome isoelectric point is 6.01

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 111 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A2K9V567|A0A2K9V567_9CAUD Glutaredoxin domain-containing protein OS=Lactobacillus phage Satyr OX=2070201 PE=4 SV=1
MM1 pKa = 7.82IEE3 pKa = 4.01LLLYY7 pKa = 10.42RR8 pKa = 11.84DD9 pKa = 3.73DD10 pKa = 3.67LKK12 pKa = 11.6YY13 pKa = 11.13YY14 pKa = 8.79ITEE17 pKa = 4.29EE18 pKa = 4.01YY19 pKa = 10.01TLQLDD24 pKa = 3.87RR25 pKa = 11.84DD26 pKa = 3.91WLVDD30 pKa = 3.59YY31 pKa = 10.64IKK33 pKa = 11.16NSTEE37 pKa = 3.86YY38 pKa = 11.12ASVDD42 pKa = 3.3EE43 pKa = 5.38FLEE46 pKa = 4.99FYY48 pKa = 10.81NSEE51 pKa = 4.01DD52 pKa = 3.56TEE54 pKa = 4.63EE55 pKa = 4.64IISTLDD61 pKa = 4.79DD62 pKa = 3.25MDD64 pKa = 3.95EE65 pKa = 4.64PYY67 pKa = 10.51TLEE70 pKa = 3.81KK71 pKa = 9.06TGRR74 pKa = 11.84YY75 pKa = 8.85CDD77 pKa = 4.75CDD79 pKa = 3.8DD80 pKa = 4.9LLL82 pKa = 6.19

Molecular weight: 9.96 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A2K9V512|A0A2K9V512_9CAUD Uncharacterized protein OS=Lactobacillus phage Satyr OX=2070201 PE=4 SV=1
MM1 pKa = 7.47VYY3 pKa = 10.96GLIRR7 pKa = 11.84FIIMVTVGTVIAITLALGVGFIVGTPVIWKK37 pKa = 8.48WVVGVLIIVFGVIDD51 pKa = 3.59RR52 pKa = 11.84VVRR55 pKa = 3.86

Molecular weight: 5.98 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

111

0

111

22753

29

1887

205.0

23.06

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.865 ± 0.523

0.602 ± 0.084

7.265 ± 0.487

6.171 ± 0.341

3.89 ± 0.165

6.803 ± 0.451

1.688 ± 0.153

6.338 ± 0.203

8.329 ± 0.375

8.17 ± 0.276

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.496 ± 0.126

5.837 ± 0.221

2.549 ± 0.161

3.665 ± 0.323

3.828 ± 0.22

6.755 ± 0.319

6.311 ± 0.321

6.79 ± 0.251

1.2 ± 0.115

4.448 ± 0.262
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski