Amino acid dipepetide frequency for Mosavirus A2 (isolate Coracias garrulus/Hungary/SZAL6-MoV/2011)

Apart from single amino acid frequencies one can also calculate so called amino acid dipeptide frequency.

There is 400 possibilites (441 if we consider Xaa as additional 21st amino acid representing all non-standard or unknown amino acids). Thus, if the dipeptides would be present randomly in proteins each amino acid dipeptide should be present with 0.25% frequency. As it is not the case in the nature, for better visablity all more than expected dipepetides are marked by red, and those which are underrepresented are marked by blue in the table.

All values are presented as per milles (‰), therefore need to be multiplied by 10-3.

For more information see sequence space article on Wikipedia.

AlaCysAspGluPheGlyHisIleLysLeuMetAsnProGlnArgSerThrValTrpTyrXaa
Ala
4.315AlaAla: 4.315 ± 0.0
1.569AlaCys: 1.569 ± 0.0
4.315AlaAsp: 4.315 ± 0.0
5.1AlaGlu: 5.1 ± 0.0
2.354AlaPhe: 2.354 ± 0.0
6.669AlaGly: 6.669 ± 0.0
1.177AlaHis: 1.177 ± 0.0
2.746AlaIle: 2.746 ± 0.0
3.138AlaLys: 3.138 ± 0.0
4.315AlaLeu: 4.315 ± 0.0
3.138AlaMet: 3.138 ± 0.0
2.746AlaAsn: 2.746 ± 0.0
3.531AlaPro: 3.531 ± 0.0
2.746AlaGln: 2.746 ± 0.0
3.138AlaArg: 3.138 ± 0.0
4.708AlaSer: 4.708 ± 0.0
6.277AlaThr: 6.277 ± 0.0
5.1AlaVal: 5.1 ± 0.0
0.785AlaTrp: 0.785 ± 0.0
3.531AlaTyr: 3.531 ± 0.0
0.0AlaXaa: 0.0 ± 0.0
Cys
0.392CysAla: 0.392 ± 0.0
0.0CysCys: 0.0 ± 0.0
1.569CysAsp: 1.569 ± 0.0
1.177CysGlu: 1.177 ± 0.0
1.569CysPhe: 1.569 ± 0.0
1.569CysGly: 1.569 ± 0.0
0.0CysHis: 0.0 ± 0.0
1.177CysIle: 1.177 ± 0.0
0.392CysLys: 0.392 ± 0.0
1.569CysLeu: 1.569 ± 0.0
0.0CysMet: 0.0 ± 0.0
1.177CysAsn: 1.177 ± 0.0
1.569CysPro: 1.569 ± 0.0
1.569CysGln: 1.569 ± 0.0
0.785CysArg: 0.785 ± 0.0
1.569CysSer: 1.569 ± 0.0
0.785CysThr: 0.785 ± 0.0
0.785CysVal: 0.785 ± 0.0
0.785CysTrp: 0.785 ± 0.0
1.177CysTyr: 1.177 ± 0.0
0.0CysXaa: 0.0 ± 0.0
Asp
3.923AspAla: 3.923 ± 0.0
0.785AspCys: 0.785 ± 0.0
3.531AspAsp: 3.531 ± 0.0
3.531AspGlu: 3.531 ± 0.0
3.923AspPhe: 3.923 ± 0.0
2.354AspGly: 2.354 ± 0.0
0.785AspHis: 0.785 ± 0.0
4.315AspIle: 4.315 ± 0.0
1.177AspLys: 1.177 ± 0.0
5.492AspLeu: 5.492 ± 0.0
1.962AspMet: 1.962 ± 0.0
1.177AspAsn: 1.177 ± 0.0
2.746AspPro: 2.746 ± 0.0
1.962AspGln: 1.962 ± 0.0
3.138AspArg: 3.138 ± 0.0
3.531AspSer: 3.531 ± 0.0
2.354AspThr: 2.354 ± 0.0
5.1AspVal: 5.1 ± 0.0
0.785AspTrp: 0.785 ± 0.0
1.962AspTyr: 1.962 ± 0.0
0.0AspXaa: 0.0 ± 0.0
Glu
4.315GluAla: 4.315 ± 0.0
0.392GluCys: 0.392 ± 0.0
3.138GluAsp: 3.138 ± 0.0
6.669GluGlu: 6.669 ± 0.0
1.569GluPhe: 1.569 ± 0.0
3.531GluGly: 3.531 ± 0.0
1.177GluHis: 1.177 ± 0.0
2.354GluIle: 2.354 ± 0.0
4.315GluLys: 4.315 ± 0.0
5.1GluLeu: 5.1 ± 0.0
0.785GluMet: 0.785 ± 0.0
3.138GluAsn: 3.138 ± 0.0
3.138GluPro: 3.138 ± 0.0
1.569GluGln: 1.569 ± 0.0
1.962GluArg: 1.962 ± 0.0
4.708GluSer: 4.708 ± 0.0
5.885GluThr: 5.885 ± 0.0
3.531GluVal: 3.531 ± 0.0
1.177GluTrp: 1.177 ± 0.0
1.177GluTyr: 1.177 ± 0.0
0.0GluXaa: 0.0 ± 0.0
Phe
2.746PheAla: 2.746 ± 0.0
1.569PheCys: 1.569 ± 0.0
3.531PheAsp: 3.531 ± 0.0
2.746PheGlu: 2.746 ± 0.0
1.962PhePhe: 1.962 ± 0.0
3.138PheGly: 3.138 ± 0.0
0.392PheHis: 0.392 ± 0.0
0.785PheIle: 0.785 ± 0.0
2.354PheLys: 2.354 ± 0.0
3.138PheLeu: 3.138 ± 0.0
1.177PheMet: 1.177 ± 0.0
3.138PheAsn: 3.138 ± 0.0
2.354PhePro: 2.354 ± 0.0
1.569PheGln: 1.569 ± 0.0
2.354PheArg: 2.354 ± 0.0
1.962PheSer: 1.962 ± 0.0
3.138PheThr: 3.138 ± 0.0
5.1PheVal: 5.1 ± 0.0
0.0PheTrp: 0.0 ± 0.0
1.177PheTyr: 1.177 ± 0.0
0.0PheXaa: 0.0 ± 0.0
Gly
5.1GlyAla: 5.1 ± 0.0
1.569GlyCys: 1.569 ± 0.0
1.962GlyAsp: 1.962 ± 0.0
3.531GlyGlu: 3.531 ± 0.0
3.138GlyPhe: 3.138 ± 0.0
4.315GlyGly: 4.315 ± 0.0
0.392GlyHis: 0.392 ± 0.0
3.531GlyIle: 3.531 ± 0.0
4.315GlyLys: 4.315 ± 0.0
5.885GlyLeu: 5.885 ± 0.0
1.962GlyMet: 1.962 ± 0.0
2.746GlyAsn: 2.746 ± 0.0
2.746GlyPro: 2.746 ± 0.0
3.531GlyGln: 3.531 ± 0.0
1.962GlyArg: 1.962 ± 0.0
3.138GlySer: 3.138 ± 0.0
4.708GlyThr: 4.708 ± 0.0
6.277GlyVal: 6.277 ± 0.0
1.177GlyTrp: 1.177 ± 0.0
3.531GlyTyr: 3.531 ± 0.0
0.0GlyXaa: 0.0 ± 0.0
His
0.785HisAla: 0.785 ± 0.0
0.785HisCys: 0.785 ± 0.0
0.0HisAsp: 0.0 ± 0.0
1.177HisGlu: 1.177 ± 0.0
1.569HisPhe: 1.569 ± 0.0
0.785HisGly: 0.785 ± 0.0
0.785HisHis: 0.785 ± 0.0
0.392HisIle: 0.392 ± 0.0
1.177HisLys: 1.177 ± 0.0
0.785HisLeu: 0.785 ± 0.0
1.177HisMet: 1.177 ± 0.0
1.177HisAsn: 1.177 ± 0.0
1.177HisPro: 1.177 ± 0.0
1.962HisGln: 1.962 ± 0.0
1.177HisArg: 1.177 ± 0.0
1.177HisSer: 1.177 ± 0.0
0.785HisThr: 0.785 ± 0.0
1.569HisVal: 1.569 ± 0.0
0.392HisTrp: 0.392 ± 0.0
0.392HisTyr: 0.392 ± 0.0
0.0HisXaa: 0.0 ± 0.0
Ile
5.492IleAla: 5.492 ± 0.0
1.177IleCys: 1.177 ± 0.0
1.177IleAsp: 1.177 ± 0.0
3.531IleGlu: 3.531 ± 0.0
1.177IlePhe: 1.177 ± 0.0
2.354IleGly: 2.354 ± 0.0
1.177IleHis: 1.177 ± 0.0
2.746IleIle: 2.746 ± 0.0
3.138IleLys: 3.138 ± 0.0
3.923IleLeu: 3.923 ± 0.0
0.785IleMet: 0.785 ± 0.0
3.531IleAsn: 3.531 ± 0.0
3.138IlePro: 3.138 ± 0.0
2.746IleGln: 2.746 ± 0.0
1.962IleArg: 1.962 ± 0.0
2.746IleSer: 2.746 ± 0.0
3.923IleThr: 3.923 ± 0.0
3.531IleVal: 3.531 ± 0.0
1.569IleTrp: 1.569 ± 0.0
1.569IleTyr: 1.569 ± 0.0
0.0IleXaa: 0.0 ± 0.0
Lys
4.708LysAla: 4.708 ± 0.0
1.177LysCys: 1.177 ± 0.0
3.138LysAsp: 3.138 ± 0.0
1.962LysGlu: 1.962 ± 0.0
1.962LysPhe: 1.962 ± 0.0
2.746LysGly: 2.746 ± 0.0
3.138LysHis: 3.138 ± 0.0
2.746LysIle: 2.746 ± 0.0
4.315LysLys: 4.315 ± 0.0
3.531LysLeu: 3.531 ± 0.0
3.138LysMet: 3.138 ± 0.0
1.962LysAsn: 1.962 ± 0.0
4.315LysPro: 4.315 ± 0.0
2.354LysGln: 2.354 ± 0.0
1.569LysArg: 1.569 ± 0.0
1.177LysSer: 1.177 ± 0.0
3.531LysThr: 3.531 ± 0.0
3.923LysVal: 3.923 ± 0.0
0.0LysTrp: 0.0 ± 0.0
1.177LysTyr: 1.177 ± 0.0
0.0LysXaa: 0.0 ± 0.0
Leu
5.885LeuAla: 5.885 ± 0.0
0.785LeuCys: 0.785 ± 0.0
4.315LeuAsp: 4.315 ± 0.0
4.708LeuGlu: 4.708 ± 0.0
3.531LeuPhe: 3.531 ± 0.0
5.1LeuGly: 5.1 ± 0.0
1.962LeuHis: 1.962 ± 0.0
3.531LeuIle: 3.531 ± 0.0
7.454LeuLys: 7.454 ± 0.0
6.277LeuLeu: 6.277 ± 0.0
1.569LeuMet: 1.569 ± 0.0
1.962LeuAsn: 1.962 ± 0.0
4.708LeuPro: 4.708 ± 0.0
2.746LeuGln: 2.746 ± 0.0
1.962LeuArg: 1.962 ± 0.0
5.492LeuSer: 5.492 ± 0.0
7.062LeuThr: 7.062 ± 0.0
5.1LeuVal: 5.1 ± 0.0
0.0LeuTrp: 0.0 ± 0.0
1.962LeuTyr: 1.962 ± 0.0
0.0LeuXaa: 0.0 ± 0.0
Met
1.569MetAla: 1.569 ± 0.0
0.785MetCys: 0.785 ± 0.0
2.746MetAsp: 2.746 ± 0.0
2.354MetGlu: 2.354 ± 0.0
1.177MetPhe: 1.177 ± 0.0
0.0MetGly: 0.0 ± 0.0
0.0MetHis: 0.0 ± 0.0
2.746MetIle: 2.746 ± 0.0
0.392MetLys: 0.392 ± 0.0
3.138MetLeu: 3.138 ± 0.0
1.177MetMet: 1.177 ± 0.0
1.177MetAsn: 1.177 ± 0.0
2.746MetPro: 2.746 ± 0.0
1.569MetGln: 1.569 ± 0.0
1.569MetArg: 1.569 ± 0.0
2.354MetSer: 2.354 ± 0.0
0.785MetThr: 0.785 ± 0.0
4.315MetVal: 4.315 ± 0.0
0.785MetTrp: 0.785 ± 0.0
1.177MetTyr: 1.177 ± 0.0
0.0MetXaa: 0.0 ± 0.0
Asn
2.746AsnAla: 2.746 ± 0.0
1.177AsnCys: 1.177 ± 0.0
0.785AsnAsp: 0.785 ± 0.0
2.354AsnGlu: 2.354 ± 0.0
3.138AsnPhe: 3.138 ± 0.0
5.885AsnGly: 5.885 ± 0.0
0.785AsnHis: 0.785 ± 0.0
1.569AsnIle: 1.569 ± 0.0
0.392AsnLys: 0.392 ± 0.0
1.962AsnLeu: 1.962 ± 0.0
1.962AsnMet: 1.962 ± 0.0
1.962AsnAsn: 1.962 ± 0.0
2.354AsnPro: 2.354 ± 0.0
1.962AsnGln: 1.962 ± 0.0
2.354AsnArg: 2.354 ± 0.0
2.746AsnSer: 2.746 ± 0.0
4.315AsnThr: 4.315 ± 0.0
2.746AsnVal: 2.746 ± 0.0
0.785AsnTrp: 0.785 ± 0.0
1.962AsnTyr: 1.962 ± 0.0
0.0AsnXaa: 0.0 ± 0.0
Pro
3.138ProAla: 3.138 ± 0.0
1.177ProCys: 1.177 ± 0.0
4.708ProAsp: 4.708 ± 0.0
5.1ProGlu: 5.1 ± 0.0
2.354ProPhe: 2.354 ± 0.0
4.315ProGly: 4.315 ± 0.0
1.177ProHis: 1.177 ± 0.0
1.177ProIle: 1.177 ± 0.0
4.708ProLys: 4.708 ± 0.0
5.492ProLeu: 5.492 ± 0.0
1.177ProMet: 1.177 ± 0.0
0.392ProAsn: 0.392 ± 0.0
1.177ProPro: 1.177 ± 0.0
1.962ProGln: 1.962 ± 0.0
3.138ProArg: 3.138 ± 0.0
1.569ProSer: 1.569 ± 0.0
4.708ProThr: 4.708 ± 0.0
7.454ProVal: 7.454 ± 0.0
0.0ProTrp: 0.0 ± 0.0
3.531ProTyr: 3.531 ± 0.0
0.0ProXaa: 0.0 ± 0.0
Gln
3.531GlnAla: 3.531 ± 0.0
0.785GlnCys: 0.785 ± 0.0
1.177GlnAsp: 1.177 ± 0.0
1.962GlnGlu: 1.962 ± 0.0
0.785GlnPhe: 0.785 ± 0.0
5.1GlnGly: 5.1 ± 0.0
1.177GlnHis: 1.177 ± 0.0
1.569GlnIle: 1.569 ± 0.0
1.177GlnLys: 1.177 ± 0.0
4.315GlnLeu: 4.315 ± 0.0
2.354GlnMet: 2.354 ± 0.0
2.354GlnAsn: 2.354 ± 0.0
1.177GlnPro: 1.177 ± 0.0
1.569GlnGln: 1.569 ± 0.0
1.962GlnArg: 1.962 ± 0.0
2.354GlnSer: 2.354 ± 0.0
2.354GlnThr: 2.354 ± 0.0
1.569GlnVal: 1.569 ± 0.0
0.785GlnTrp: 0.785 ± 0.0
2.354GlnTyr: 2.354 ± 0.0
0.0GlnXaa: 0.0 ± 0.0
Arg
3.923ArgAla: 3.923 ± 0.0
1.177ArgCys: 1.177 ± 0.0
1.177ArgAsp: 1.177 ± 0.0
1.962ArgGlu: 1.962 ± 0.0
1.177ArgPhe: 1.177 ± 0.0
1.177ArgGly: 1.177 ± 0.0
1.569ArgHis: 1.569 ± 0.0
2.746ArgIle: 2.746 ± 0.0
3.138ArgLys: 3.138 ± 0.0
3.138ArgLeu: 3.138 ± 0.0
1.177ArgMet: 1.177 ± 0.0
2.746ArgAsn: 2.746 ± 0.0
3.531ArgPro: 3.531 ± 0.0
1.569ArgGln: 1.569 ± 0.0
1.962ArgArg: 1.962 ± 0.0
3.923ArgSer: 3.923 ± 0.0
4.315ArgThr: 4.315 ± 0.0
1.569ArgVal: 1.569 ± 0.0
0.785ArgTrp: 0.785 ± 0.0
2.354ArgTyr: 2.354 ± 0.0
0.0ArgXaa: 0.0 ± 0.0
Ser
4.315SerAla: 4.315 ± 0.0
0.392SerCys: 0.392 ± 0.0
4.708SerAsp: 4.708 ± 0.0
1.569SerGlu: 1.569 ± 0.0
3.531SerPhe: 3.531 ± 0.0
4.708SerGly: 4.708 ± 0.0
0.785SerHis: 0.785 ± 0.0
3.531SerIle: 3.531 ± 0.0
3.138SerLys: 3.138 ± 0.0
3.531SerLeu: 3.531 ± 0.0
1.569SerMet: 1.569 ± 0.0
5.1SerAsn: 5.1 ± 0.0
2.354SerPro: 2.354 ± 0.0
0.785SerGln: 0.785 ± 0.0
1.962SerArg: 1.962 ± 0.0
1.569SerSer: 1.569 ± 0.0
4.315SerThr: 4.315 ± 0.0
5.492SerVal: 5.492 ± 0.0
0.785SerTrp: 0.785 ± 0.0
1.177SerTyr: 1.177 ± 0.0
0.0SerXaa: 0.0 ± 0.0
Thr
4.708ThrAla: 4.708 ± 0.0
1.177ThrCys: 1.177 ± 0.0
3.923ThrAsp: 3.923 ± 0.0
3.923ThrGlu: 3.923 ± 0.0
2.354ThrPhe: 2.354 ± 0.0
4.315ThrGly: 4.315 ± 0.0
0.392ThrHis: 0.392 ± 0.0
5.492ThrIle: 5.492 ± 0.0
2.746ThrLys: 2.746 ± 0.0
4.315ThrLeu: 4.315 ± 0.0
1.962ThrMet: 1.962 ± 0.0
2.746ThrAsn: 2.746 ± 0.0
8.239ThrPro: 8.239 ± 0.0
5.885ThrGln: 5.885 ± 0.0
3.138ThrArg: 3.138 ± 0.0
3.923ThrSer: 3.923 ± 0.0
8.631ThrThr: 8.631 ± 0.0
6.277ThrVal: 6.277 ± 0.0
0.785ThrTrp: 0.785 ± 0.0
3.138ThrTyr: 3.138 ± 0.0
0.0ThrXaa: 0.0 ± 0.0
Val
4.708ValAla: 4.708 ± 0.0
1.177ValCys: 1.177 ± 0.0
4.315ValAsp: 4.315 ± 0.0
3.138ValGlu: 3.138 ± 0.0
3.923ValPhe: 3.923 ± 0.0
4.315ValGly: 4.315 ± 0.0
1.177ValHis: 1.177 ± 0.0
6.277ValIle: 6.277 ± 0.0
2.746ValLys: 2.746 ± 0.0
6.669ValLeu: 6.669 ± 0.0
3.138ValMet: 3.138 ± 0.0
2.354ValAsn: 2.354 ± 0.0
6.277ValPro: 6.277 ± 0.0
0.785ValGln: 0.785 ± 0.0
4.708ValArg: 4.708 ± 0.0
4.315ValSer: 4.315 ± 0.0
6.277ValThr: 6.277 ± 0.0
7.454ValVal: 7.454 ± 0.0
0.392ValTrp: 0.392 ± 0.0
4.708ValTyr: 4.708 ± 0.0
0.0ValXaa: 0.0 ± 0.0
Trp
1.962TrpAla: 1.962 ± 0.0
0.0TrpCys: 0.0 ± 0.0
1.569TrpAsp: 1.569 ± 0.0
0.392TrpGlu: 0.392 ± 0.0
1.177TrpPhe: 1.177 ± 0.0
0.392TrpGly: 0.392 ± 0.0
0.392TrpHis: 0.392 ± 0.0
0.785TrpIle: 0.785 ± 0.0
0.392TrpLys: 0.392 ± 0.0
1.569TrpLeu: 1.569 ± 0.0
0.392TrpMet: 0.392 ± 0.0
0.0TrpAsn: 0.0 ± 0.0
0.0TrpPro: 0.0 ± 0.0
0.392TrpGln: 0.392 ± 0.0
1.569TrpArg: 1.569 ± 0.0
0.0TrpSer: 0.0 ± 0.0
1.177TrpThr: 1.177 ± 0.0
0.0TrpVal: 0.0 ± 0.0
0.785TrpTrp: 0.785 ± 0.0
0.785TrpTyr: 0.785 ± 0.0
0.0TrpXaa: 0.0 ± 0.0
Tyr
3.138TyrAla: 3.138 ± 0.0
1.962TyrCys: 1.962 ± 0.0
2.746TyrAsp: 2.746 ± 0.0
2.746TyrGlu: 2.746 ± 0.0
1.962TyrPhe: 1.962 ± 0.0
2.746TyrGly: 2.746 ± 0.0
0.785TyrHis: 0.785 ± 0.0
1.177TyrIle: 1.177 ± 0.0
1.962TyrLys: 1.962 ± 0.0
1.962TyrLeu: 1.962 ± 0.0
1.569TyrMet: 1.569 ± 0.0
2.354TyrAsn: 2.354 ± 0.0
1.177TyrPro: 1.177 ± 0.0
1.177TyrGln: 1.177 ± 0.0
2.746TyrArg: 2.746 ± 0.0
2.354TyrSer: 2.354 ± 0.0
2.746TyrThr: 2.746 ± 0.0
2.354TyrVal: 2.354 ± 0.0
1.177TyrTrp: 1.177 ± 0.0
0.392TyrTyr: 0.392 ± 0.0
0.0TyrXaa: 0.0 ± 0.0
Xaa
0.0XaaAla: 0.0 ± 0.0
0.0XaaCys: 0.0 ± 0.0
0.0XaaAsp: 0.0 ± 0.0
0.0XaaGlu: 0.0 ± 0.0
0.0XaaPhe: 0.0 ± 0.0
0.0XaaGly: 0.0 ± 0.0
0.0XaaHis: 0.0 ± 0.0
0.0XaaIle: 0.0 ± 0.0
0.0XaaLys: 0.0 ± 0.0
0.0XaaLeu: 0.0 ± 0.0
0.0XaaMet: 0.0 ± 0.0
0.0XaaAsn: 0.0 ± 0.0
0.0XaaPro: 0.0 ± 0.0
0.0XaaGln: 0.0 ± 0.0
0.0XaaArg: 0.0 ± 0.0
0.0XaaSer: 0.0 ± 0.0
0.0XaaThr: 0.0 ± 0.0
0.0XaaVal: 0.0 ± 0.0
0.0XaaTrp: 0.0 ± 0.0
0.0XaaTyr: 0.0 ± 0.0
0.0XaaXaa: 0.0 ± 0.0
Statistics based on 1 proteins (2550 amino acids)

Note: The error has been estimated with the bootstraping (x100) at the protein level

Above dipeptide statistics (among other stats for this proteome) you can download from this CSV file
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski