LeviOr01 phage

Taxonomy: Viruses; Riboviria; Orthornavirae; Lenarviricota; Allassoviricetes; Levivirales; Leviviridae; unclassified Leviviridae

Average proteome isoelectric point is 8.14

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1U6U245|A0A1U6U245_9VIRU Putative maturation protein OS=LeviOr01 phage OX=1927956 GN=mat PE=4 SV=1
MM1 pKa = 7.13HH2 pKa = 7.56TLTAQVTSALLQDD15 pKa = 4.94LGLEE19 pKa = 4.19SLPKK23 pKa = 10.17EE24 pKa = 4.29FPDD27 pKa = 4.37RR28 pKa = 11.84DD29 pKa = 3.77SEE31 pKa = 4.61FPARR35 pKa = 11.84YY36 pKa = 8.49LAYY39 pKa = 10.34NFVRR43 pKa = 11.84KK44 pKa = 10.24LEE46 pKa = 4.24PFSRR50 pKa = 11.84KK51 pKa = 7.42TDD53 pKa = 3.26VPVAVLRR60 pKa = 11.84NSLTTFMEE68 pKa = 3.94AEE70 pKa = 4.05YY71 pKa = 10.21RR72 pKa = 11.84CRR74 pKa = 11.84VVNHH78 pKa = 6.67HH79 pKa = 5.58GRR81 pKa = 11.84MYY83 pKa = 10.45SALRR87 pKa = 11.84EE88 pKa = 3.85EE89 pKa = 4.33DD90 pKa = 2.81RR91 pKa = 11.84SYY93 pKa = 10.13FTEE96 pKa = 4.13AFRR99 pKa = 11.84LAKK102 pKa = 9.92IWINQTMSGYY112 pKa = 8.71WPRR115 pKa = 11.84WEE117 pKa = 3.92NARR120 pKa = 11.84YY121 pKa = 7.96TGGASRR127 pKa = 11.84NCSRR131 pKa = 11.84DD132 pKa = 3.01RR133 pKa = 11.84SLPALKK139 pKa = 9.86WSGYY143 pKa = 8.56AEE145 pKa = 4.08RR146 pKa = 11.84SNLSTTRR153 pKa = 11.84PALAVVNDD161 pKa = 3.89YY162 pKa = 10.78IKK164 pKa = 10.93PEE166 pKa = 4.17FSPSDD171 pKa = 3.08WRR173 pKa = 11.84EE174 pKa = 3.4RR175 pKa = 11.84DD176 pKa = 3.02VDD178 pKa = 3.62IVDD181 pKa = 3.94DD182 pKa = 3.97SRR184 pKa = 11.84FDD186 pKa = 3.98FVAKK190 pKa = 8.53TAKK193 pKa = 10.02AVRR196 pKa = 11.84FMAMEE201 pKa = 4.38PEE203 pKa = 4.23YY204 pKa = 11.8NMLAQKK210 pKa = 10.65CVGDD214 pKa = 4.75CIRR217 pKa = 11.84AALNAQGINLDD228 pKa = 3.73DD229 pKa = 3.56QRR231 pKa = 11.84PNQEE235 pKa = 3.63LAYY238 pKa = 9.89LGSIFRR244 pKa = 11.84TRR246 pKa = 11.84ATLDD250 pKa = 3.03QSSASDD256 pKa = 4.38CIALFLLRR264 pKa = 11.84LLPEE268 pKa = 4.37RR269 pKa = 11.84VRR271 pKa = 11.84DD272 pKa = 3.48WVLACRR278 pKa = 11.84TPATSVAGSRR288 pKa = 11.84LVLEE292 pKa = 5.25KK293 pKa = 10.72VATMGNGFIFEE304 pKa = 4.28LQSLIFAAFAHH315 pKa = 6.8ACTQLSGGRR324 pKa = 11.84EE325 pKa = 4.0CDD327 pKa = 2.97IAVYY331 pKa = 10.55GDD333 pKa = 4.73DD334 pKa = 4.84IIVSTPVARR343 pKa = 11.84PLMDD347 pKa = 3.35TLEE350 pKa = 4.32YY351 pKa = 10.85YY352 pKa = 11.01GLIPNMEE359 pKa = 4.02KK360 pKa = 10.51SYY362 pKa = 10.46WDD364 pKa = 3.13EE365 pKa = 4.4DD366 pKa = 3.83EE367 pKa = 5.05PFRR370 pKa = 11.84EE371 pKa = 4.44SCGKK375 pKa = 9.49HH376 pKa = 3.95WFAGRR381 pKa = 11.84DD382 pKa = 3.35VTPFYY387 pKa = 11.15VKK389 pKa = 10.55EE390 pKa = 3.87PLGPLRR396 pKa = 11.84TLFRR400 pKa = 11.84AYY402 pKa = 10.68NGLKK406 pKa = 8.99EE407 pKa = 3.85WTMRR411 pKa = 11.84TGIPLNRR418 pKa = 11.84TLATILAAIPKK429 pKa = 8.38KK430 pKa = 10.58DD431 pKa = 3.42RR432 pKa = 11.84VIVPPSFSIDD442 pKa = 3.74CGLHH446 pKa = 5.41TPVSGCTFPKK456 pKa = 10.0RR457 pKa = 11.84VIRR460 pKa = 11.84HH461 pKa = 4.55GDD463 pKa = 2.53IRR465 pKa = 11.84YY466 pKa = 9.76SFKK469 pKa = 11.08CLVDD473 pKa = 3.31TSEE476 pKa = 5.04DD477 pKa = 3.27VTARR481 pKa = 11.84LDD483 pKa = 3.83DD484 pKa = 4.2EE485 pKa = 4.89VKK487 pKa = 10.28LRR489 pKa = 11.84YY490 pKa = 8.71WLFEE494 pKa = 4.24PPAEE498 pKa = 3.95LLPRR502 pKa = 11.84HH503 pKa = 6.71LYY505 pKa = 8.88PASPLAGYY513 pKa = 8.97PRR515 pKa = 11.84EE516 pKa = 3.95EE517 pKa = 3.75KK518 pKa = 10.38RR519 pKa = 11.84YY520 pKa = 9.29VRR522 pKa = 11.84GLSGEE527 pKa = 4.11SRR529 pKa = 11.84PEE531 pKa = 3.23VWARR535 pKa = 11.84RR536 pKa = 11.84EE537 pKa = 4.2AGPGDD542 pKa = 3.74APP544 pKa = 4.18

Molecular weight: 61.91 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1U6U260|A0A1U6U260_9VIRU Putative coat protein OS=LeviOr01 phage OX=1927956 GN=cp PE=4 SV=1
MM1 pKa = 7.95RR2 pKa = 11.84SEE4 pKa = 3.96TQEE7 pKa = 3.77WEE9 pKa = 4.88IYY11 pKa = 8.98PCWHH15 pKa = 6.74GKK17 pKa = 8.24PPKK20 pKa = 9.41TSGPTVVDD28 pKa = 3.35SKK30 pKa = 11.98GNIDD34 pKa = 4.04VSAIPCEE41 pKa = 4.33TEE43 pKa = 3.88SNAGVTKK50 pKa = 10.45GNHH53 pKa = 5.18VDD55 pKa = 3.94ALPYY59 pKa = 9.77WSDD62 pKa = 3.21RR63 pKa = 11.84LLVTVEE69 pKa = 3.58PRR71 pKa = 11.84VRR73 pKa = 11.84NISYY77 pKa = 10.01GVAVTRR83 pKa = 11.84MPVPPPEE90 pKa = 4.16NTCIPDD96 pKa = 3.79GDD98 pKa = 4.14PGGSKK103 pKa = 9.61TIVRR107 pKa = 11.84NKK109 pKa = 10.27YY110 pKa = 10.7SIDD113 pKa = 3.53PFEE116 pKa = 4.18WAAAPTFDD124 pKa = 5.01LPEE127 pKa = 3.94VSPAEE132 pKa = 4.06LEE134 pKa = 4.36FLRR137 pKa = 11.84GMADD141 pKa = 3.14TRR143 pKa = 11.84ALASLNKK150 pKa = 10.49AMVNLPMLFKK160 pKa = 10.55EE161 pKa = 4.09RR162 pKa = 11.84RR163 pKa = 11.84EE164 pKa = 4.14TLKK167 pKa = 10.29MAAGKK172 pKa = 10.66VGVLADD178 pKa = 3.87AARR181 pKa = 11.84SIQQRR186 pKa = 11.84DD187 pKa = 3.63FSRR190 pKa = 11.84YY191 pKa = 8.34RR192 pKa = 11.84KK193 pKa = 8.54VAKK196 pKa = 9.6RR197 pKa = 11.84DD198 pKa = 3.29RR199 pKa = 11.84RR200 pKa = 11.84RR201 pKa = 11.84VARR204 pKa = 11.84DD205 pKa = 2.92IANEE209 pKa = 3.68HH210 pKa = 6.78LEE212 pKa = 5.36FIFGWLPLIAEE223 pKa = 4.58VEE225 pKa = 4.18GAMDD229 pKa = 4.05YY230 pKa = 10.52IAQEE234 pKa = 3.72RR235 pKa = 11.84FEE237 pKa = 4.43FIKK240 pKa = 10.96GRR242 pKa = 11.84GSHH245 pKa = 6.95VITRR249 pKa = 11.84DD250 pKa = 3.38QKK252 pKa = 8.8VHH254 pKa = 5.41VSAPVLGLDD263 pKa = 3.13GWYY266 pKa = 10.56GYY268 pKa = 9.95NRR270 pKa = 11.84EE271 pKa = 3.97VARR274 pKa = 11.84AEE276 pKa = 4.04LNGIRR281 pKa = 11.84HH282 pKa = 5.84EE283 pKa = 4.66LIGMRR288 pKa = 11.84TNLRR292 pKa = 11.84MDD294 pKa = 3.38ITSAIAGDD302 pKa = 3.58ARR304 pKa = 11.84QLGFEE309 pKa = 5.15PISTLYY315 pKa = 11.42DD316 pKa = 3.44MVPLSFVSGWVTNFDD331 pKa = 3.47AYY333 pKa = 11.24VRR335 pKa = 11.84TIAPLVGLSFRR346 pKa = 11.84TGSRR350 pKa = 11.84NLRR353 pKa = 11.84KK354 pKa = 9.48QVVLDD359 pKa = 3.28VAGRR363 pKa = 11.84VLEE366 pKa = 4.34QNPPTYY372 pKa = 9.54PAPWKK377 pKa = 10.3AWVEE381 pKa = 3.85EE382 pKa = 4.05RR383 pKa = 11.84DD384 pKa = 3.55RR385 pKa = 11.84SVSLLTGNRR394 pKa = 11.84TRR396 pKa = 11.84DD397 pKa = 3.39EE398 pKa = 4.24RR399 pKa = 11.84SLVLEE404 pKa = 4.29LPKK407 pKa = 10.8ASLHH411 pKa = 5.95WDD413 pKa = 2.94VDD415 pKa = 3.73VGFNEE420 pKa = 3.83VTAAISLLIQRR431 pKa = 11.84KK432 pKa = 8.8LKK434 pKa = 9.89PLQRR438 pKa = 11.84AIGIKK443 pKa = 7.13QFRR446 pKa = 11.84YY447 pKa = 9.98RR448 pKa = 11.84GPKK451 pKa = 9.2PKK453 pKa = 9.19WLQEE457 pKa = 3.26IRR459 pKa = 11.84YY460 pKa = 8.32RR461 pKa = 11.84KK462 pKa = 8.87PP463 pKa = 2.82

Molecular weight: 52.3 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3

0

3

1136

129

544

378.7

42.55

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.891 ± 0.534

1.32 ± 0.611

5.722 ± 0.388

6.162 ± 0.747

3.609 ± 0.833

6.074 ± 0.504

1.408 ± 0.154

4.665 ± 0.542

4.137 ± 0.482

9.243 ± 0.468

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.025 ± 0.122

3.257 ± 0.24

6.338 ± 0.789

2.377 ± 0.448

9.155 ± 0.719

6.954 ± 1.535

5.81 ± 1.045

7.658 ± 1.257

2.025 ± 0.32

3.169 ± 0.721
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski