Dragonfly larvae associated circular virus-5

Taxonomy: Viruses; unclassified viruses; unclassified DNA viruses; unclassified ssDNA viruses

Average proteome isoelectric point is 7.58

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|W5U1V9|W5U1V9_9VIRU Coat protein OS=Dragonfly larvae associated circular virus-5 OX=1454026 PE=4 SV=1
MM1 pKa = 7.89ADD3 pKa = 4.95LLPAQQKK10 pKa = 10.34KK11 pKa = 9.45IAPTQKK17 pKa = 9.73WKK19 pKa = 10.38DD20 pKa = 3.29QRR22 pKa = 11.84GRR24 pKa = 11.84CWCFTAFVDD33 pKa = 5.97RR34 pKa = 11.84PWKK37 pKa = 10.62DD38 pKa = 3.06IACKK42 pKa = 10.27YY43 pKa = 9.7IVVGHH48 pKa = 6.61EE49 pKa = 3.83ICPKK53 pKa = 8.81TGKK56 pKa = 8.33EE57 pKa = 3.43HH58 pKa = 5.07WQGYY62 pKa = 7.35VEE64 pKa = 5.64FGTQRR69 pKa = 11.84RR70 pKa = 11.84PTGVQKK76 pKa = 9.64TLGIPDD82 pKa = 3.43LHH84 pKa = 7.57VEE86 pKa = 4.06KK87 pKa = 10.65RR88 pKa = 11.84LDD90 pKa = 3.44TSTPDD95 pKa = 3.38HH96 pKa = 6.67AANYY100 pKa = 7.99CKK102 pKa = 10.32KK103 pKa = 10.52DD104 pKa = 3.5MKK106 pKa = 10.45FVEE109 pKa = 4.2YY110 pKa = 10.78GKK112 pKa = 10.11ISKK115 pKa = 10.06QGEE118 pKa = 4.28RR119 pKa = 11.84MDD121 pKa = 5.5LDD123 pKa = 5.23LICHH127 pKa = 6.93DD128 pKa = 4.3LQTGKK133 pKa = 8.87RR134 pKa = 11.84TWRR137 pKa = 11.84EE138 pKa = 3.26IMGSDD143 pKa = 4.92DD144 pKa = 3.43VQTVCKK150 pKa = 10.46YY151 pKa = 10.99RR152 pKa = 11.84MGLQMVAAEE161 pKa = 4.37SAAEE165 pKa = 3.93RR166 pKa = 11.84AKK168 pKa = 10.65KK169 pKa = 9.35PRR171 pKa = 11.84EE172 pKa = 4.07VTWEE176 pKa = 4.19RR177 pKa = 11.84KK178 pKa = 9.42PSMAAAWLDD187 pKa = 3.7YY188 pKa = 10.82PDD190 pKa = 4.77ALMVNLNNGACWEE203 pKa = 4.25AYY205 pKa = 10.03GGEE208 pKa = 4.0EE209 pKa = 4.34EE210 pKa = 5.38IIVRR214 pKa = 11.84HH215 pKa = 5.43AKK217 pKa = 9.86SYY219 pKa = 10.48HH220 pKa = 6.47RR221 pKa = 11.84EE222 pKa = 3.85LLLDD226 pKa = 3.78GWITPLNVKK235 pKa = 8.74CTTKK239 pKa = 10.1YY240 pKa = 10.48AAWTKK245 pKa = 8.69VICVEE250 pKa = 4.27CDD252 pKa = 3.14PEE254 pKa = 4.21FFPPVEE260 pKa = 4.14PVSEE264 pKa = 4.53VVSEE268 pKa = 4.22VPPPLGNTIPGVEE281 pKa = 4.3VPAVKK286 pKa = 10.56DD287 pKa = 3.77EE288 pKa = 4.25EE289 pKa = 5.13ASALPP294 pKa = 4.0

Molecular weight: 33.35 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|W5U1V9|W5U1V9_9VIRU Coat protein OS=Dragonfly larvae associated circular virus-5 OX=1454026 PE=4 SV=1
MM1 pKa = 6.89VFRR4 pKa = 11.84RR5 pKa = 11.84RR6 pKa = 11.84RR7 pKa = 11.84VSRR10 pKa = 11.84RR11 pKa = 11.84RR12 pKa = 11.84ASRR15 pKa = 11.84RR16 pKa = 11.84RR17 pKa = 11.84VRR19 pKa = 11.84RR20 pKa = 11.84TSRR23 pKa = 11.84RR24 pKa = 11.84RR25 pKa = 11.84PRR27 pKa = 11.84ARR29 pKa = 11.84RR30 pKa = 11.84GRR32 pKa = 11.84RR33 pKa = 11.84NGGNSIMSSSIRR45 pKa = 11.84MPHH48 pKa = 6.7KK49 pKa = 9.42YY50 pKa = 10.35SEE52 pKa = 4.26IFGLTFTGGSGVAGIYY68 pKa = 9.75QFYY71 pKa = 10.73LNYY74 pKa = 10.15LEE76 pKa = 4.96HH77 pKa = 7.11PGYY80 pKa = 9.3TGAGHH85 pKa = 6.04QPMGFDD91 pKa = 4.06QISALFNRR99 pKa = 11.84YY100 pKa = 8.15RR101 pKa = 11.84VIGMSYY107 pKa = 10.38HH108 pKa = 6.49IALTNISGVYY118 pKa = 7.26VAEE121 pKa = 3.9YY122 pKa = 10.27AVYY125 pKa = 10.0YY126 pKa = 9.17RR127 pKa = 11.84PNMTVTNDD135 pKa = 2.9FTAIMEE141 pKa = 4.47GTGVLAKK148 pKa = 10.07GHH150 pKa = 6.63LGITSSGSDD159 pKa = 2.98TRR161 pKa = 11.84THH163 pKa = 6.59RR164 pKa = 11.84GYY166 pKa = 11.35VSVARR171 pKa = 11.84ARR173 pKa = 11.84GVPRR177 pKa = 11.84RR178 pKa = 11.84NVMTEE183 pKa = 3.24SDD185 pKa = 3.82YY186 pKa = 11.38QAILGVAPNFLPSFNIAVVNQDD208 pKa = 2.71ASASVTLRR216 pKa = 11.84VRR218 pKa = 11.84VDD220 pKa = 3.12LKK222 pKa = 11.1FYY224 pKa = 9.06TIWSDD229 pKa = 3.36RR230 pKa = 11.84KK231 pKa = 10.96VMGTSS236 pKa = 2.98

Molecular weight: 26.61 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

530

236

294

265.0

29.98

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.736 ± 0.351

2.075 ± 1.367

4.717 ± 1.153

5.472 ± 2.208

3.019 ± 0.802

7.736 ± 1.324

2.453 ± 0.059

4.906 ± 0.397

5.472 ± 2.487

5.472 ± 0.534

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

3.208 ± 0.399

3.208 ± 0.957

5.472 ± 1.371

3.019 ± 0.593

9.057 ± 3.245

5.849 ± 2.287

6.226 ± 0.364

8.491 ± 0.269

2.075 ± 1.088

4.34 ± 1.049
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski