Ceraceosorus guamensis

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Exobasidiomycetes; Ceraceosorales; Ceraceosoraceae; Ceraceosorus

Average proteome isoelectric point is 7.08

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 7822 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A316VYH5|A0A316VYH5_9BASI Uncharacterized protein OS=Ceraceosorus guamensis OX=1522189 GN=IE81DRAFT_134927 PE=4 SV=1
MM1 pKa = 7.86PKK3 pKa = 10.06QSIYY7 pKa = 11.28DD8 pKa = 3.78EE9 pKa = 4.68VEE11 pKa = 4.13LEE13 pKa = 4.14DD14 pKa = 3.58MVYY17 pKa = 10.6DD18 pKa = 3.75AEE20 pKa = 5.23KK21 pKa = 11.2DD22 pKa = 3.6LFHH25 pKa = 6.67YY26 pKa = 7.91PCPCGDD32 pKa = 3.14RR33 pKa = 11.84FEE35 pKa = 4.24ITRR38 pKa = 11.84AQLKK42 pKa = 8.89EE43 pKa = 4.05AEE45 pKa = 5.31DD46 pKa = 3.62IATCPSCSLLIRR58 pKa = 11.84VVFDD62 pKa = 4.08PLDD65 pKa = 3.97FEE67 pKa = 7.56DD68 pKa = 6.05DD69 pKa = 4.18DD70 pKa = 6.04DD71 pKa = 6.17SEE73 pKa = 6.03APALPAHH80 pKa = 6.44SPLDD84 pKa = 3.5QVSQVATAAA93 pKa = 3.59

Molecular weight: 10.39 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A316VTA1|A0A316VTA1_9BASI SH3 domain-containing protein OS=Ceraceosorus guamensis OX=1522189 GN=IE81DRAFT_327191 PE=4 SV=1
MM1 pKa = 7.94PSQKK5 pKa = 10.45SFRR8 pKa = 11.84TKK10 pKa = 10.79SKK12 pKa = 9.4LAKK15 pKa = 9.87AARR18 pKa = 11.84QNRR21 pKa = 11.84PIPSWFRR28 pKa = 11.84MKK30 pKa = 10.03TGNKK34 pKa = 8.05IQYY37 pKa = 7.53NAKK40 pKa = 8.43RR41 pKa = 11.84RR42 pKa = 11.84HH43 pKa = 4.03WRR45 pKa = 11.84RR46 pKa = 11.84TKK48 pKa = 10.83LGLL51 pKa = 3.67

Molecular weight: 6.16 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

7822

0

7822

4077528

49

4808

521.3

56.51

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

11.389 ± 0.029

1.091 ± 0.012

5.414 ± 0.016

5.86 ± 0.022

3.005 ± 0.017

7.345 ± 0.027

2.573 ± 0.014

3.755 ± 0.018

4.155 ± 0.022

8.966 ± 0.031

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.815 ± 0.009

2.899 ± 0.012

6.108 ± 0.028

4.167 ± 0.019

7.081 ± 0.026

9.865 ± 0.043

5.539 ± 0.014

5.688 ± 0.018

1.26 ± 0.009

2.024 ± 0.014
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski