Haloarcula hispanica pleomorphic virus 2

Taxonomy: Viruses; Monodnaviria; Trapavirae; Saleviricota; Huolimaviricetes; Haloruvirales; Pleolipoviridae; Alphapleolipovirus; Alphapleolipovirus HHPV2

Average proteome isoelectric point is 4.95

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 8 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|W0FES0|W0FES0_9VIRU Gp7 OS=Haloarcula hispanica pleomorphic virus 2 OX=1442594 PE=4 SV=1
MM1 pKa = 7.86SDD3 pKa = 3.45TEE5 pKa = 4.33ASSSDD10 pKa = 2.97SSPRR14 pKa = 11.84MGRR17 pKa = 11.84RR18 pKa = 11.84TFLQTVGVTAGAAAGVKK35 pKa = 8.87YY36 pKa = 9.4TDD38 pKa = 3.65GTALDD43 pKa = 4.21PVGEE47 pKa = 4.28ADD49 pKa = 4.19AVVPLALAGVALAGAAGVGYY69 pKa = 10.75VGGSYY74 pKa = 11.01LEE76 pKa = 4.38DD77 pKa = 4.13KK78 pKa = 11.09YY79 pKa = 11.49LGDD82 pKa = 3.65SRR84 pKa = 11.84DD85 pKa = 3.5YY86 pKa = 11.32SGYY89 pKa = 9.14TGSDD93 pKa = 3.11ALKK96 pKa = 10.69SAIQEE101 pKa = 4.35GATSMKK107 pKa = 10.46VADD110 pKa = 4.6EE111 pKa = 4.25KK112 pKa = 11.8VMASIQNNIANSQNAGLAKK131 pKa = 10.21GKK133 pKa = 10.2AAIIKK138 pKa = 9.24EE139 pKa = 4.12MNAGNGEE146 pKa = 4.35SAATTAMQSSINEE159 pKa = 3.77YY160 pKa = 10.08FAAIQQNILTHH171 pKa = 6.3YY172 pKa = 7.31NTQLEE177 pKa = 4.55QVKK180 pKa = 9.65HH181 pKa = 6.2HH182 pKa = 6.61VDD184 pKa = 3.32QVANHH189 pKa = 6.35SNLTVGTVFASEE201 pKa = 4.6NGDD204 pKa = 3.63DD205 pKa = 4.3SPSNMTVNQRR215 pKa = 11.84SLSLVDD221 pKa = 3.65GTDD224 pKa = 3.02ATEE227 pKa = 4.47KK228 pKa = 10.86YY229 pKa = 10.83LIFNTSQDD237 pKa = 2.84GSTYY241 pKa = 10.58EE242 pKa = 4.1SGISLTTATGAADD255 pKa = 3.77FEE257 pKa = 4.75VDD259 pKa = 3.99SFSLSSGAYY268 pKa = 9.42ADD270 pKa = 4.3YY271 pKa = 11.02SDD273 pKa = 4.39EE274 pKa = 4.05YY275 pKa = 11.2QYY277 pKa = 11.34FQTVPMGNAFDD288 pKa = 4.54AVVTEE293 pKa = 4.11RR294 pKa = 11.84DD295 pKa = 3.34KK296 pKa = 11.67VLNDD300 pKa = 3.66LSTFVSDD307 pKa = 4.69VYY309 pKa = 11.0SQYY312 pKa = 11.33SAGDD316 pKa = 3.41IPTEE320 pKa = 4.79DD321 pKa = 3.11IVDD324 pKa = 5.43PITAATEE331 pKa = 3.59LRR333 pKa = 11.84TNYY336 pKa = 10.73DD337 pKa = 3.19GMQGASAHH345 pKa = 6.03AAMLGIPTNAEE356 pKa = 3.38QSVYY360 pKa = 7.89MTLEE364 pKa = 3.91SDD366 pKa = 5.1GVDD369 pKa = 2.87VWADD373 pKa = 2.99VFTNKK378 pKa = 10.32KK379 pKa = 7.97ITDD382 pKa = 3.58GSGNEE387 pKa = 3.78VGFQKK392 pKa = 10.12GTTYY396 pKa = 11.31DD397 pKa = 3.43PTTWDD402 pKa = 3.72DD403 pKa = 3.62PLYY406 pKa = 10.51IAFEE410 pKa = 4.19YY411 pKa = 11.09SEE413 pKa = 4.32TTDD416 pKa = 3.64ADD418 pKa = 4.11GNVLNSTQQDD428 pKa = 4.02TYY430 pKa = 11.55DD431 pKa = 3.99GEE433 pKa = 4.77TTTTEE438 pKa = 3.86YY439 pKa = 11.32SDD441 pKa = 4.05FVAVEE446 pKa = 4.02QPFTITEE453 pKa = 3.86ITVDD457 pKa = 3.88GEE459 pKa = 4.38SQQSFKK465 pKa = 8.68TTSRR469 pKa = 11.84NTQTSDD475 pKa = 2.98VSKK478 pKa = 10.57LQEE481 pKa = 4.07EE482 pKa = 4.77LDD484 pKa = 4.21QIRR487 pKa = 11.84QTQLEE492 pKa = 4.4LQEE495 pKa = 4.57EE496 pKa = 4.63SQSGGGGFDD505 pKa = 4.36LSGLSLGGIPGEE517 pKa = 4.13GVVLIAAGAAAYY529 pKa = 10.43LFGKK533 pKa = 10.04

Molecular weight: 56.32 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|W0FJS3|W0FJS3_9VIRU Gp8 OS=Haloarcula hispanica pleomorphic virus 2 OX=1442594 PE=4 SV=1
MM1 pKa = 7.48LRR3 pKa = 11.84TSAYY7 pKa = 10.12RR8 pKa = 11.84IYY10 pKa = 10.42TRR12 pKa = 11.84PTTAITLIPTLFISIRR28 pKa = 11.84IKK30 pKa = 10.8CLTNFRR36 pKa = 11.84NAVIAFMLEE45 pKa = 3.66RR46 pKa = 11.84RR47 pKa = 11.84KK48 pKa = 10.38LIPVGAGRR56 pKa = 11.84TLVTHH61 pKa = 7.11RR62 pKa = 11.84GFPRR66 pKa = 11.84QRR68 pKa = 11.84PVLPHH73 pKa = 7.5RR74 pKa = 11.84ILQWQLTLTKK84 pKa = 9.82LLPHH88 pKa = 6.45ATINVPDD95 pKa = 3.74NRR97 pKa = 11.84ITANLALAQEE107 pKa = 4.67TPYY110 pKa = 10.93SRR112 pKa = 11.84SQARR116 pKa = 11.84SEE118 pKa = 4.05TGIPLAHH125 pKa = 5.84RR126 pKa = 11.84TVVKK130 pKa = 9.41PHH132 pKa = 4.98QEE134 pKa = 3.74RR135 pKa = 11.84YY136 pKa = 7.04STHH139 pKa = 5.49IHH141 pKa = 5.37TQAQDD146 pKa = 3.27TSRR149 pKa = 11.84GPTGGLLSGVLWVGGFVGGNPHH171 pKa = 4.5QQEE174 pKa = 4.38RR175 pKa = 11.84TEE177 pKa = 4.4TSCPAA182 pKa = 3.7

Molecular weight: 20.38 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

8

0

8

2525

115

725

315.6

34.23

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

10.139 ± 0.696

1.267 ± 0.529

8.436 ± 0.904

8.396 ± 0.799

3.168 ± 0.642

7.921 ± 0.56

1.782 ± 0.49

3.406 ± 0.626

2.614 ± 0.257

7.802 ± 1.055

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.178 ± 0.206

3.05 ± 0.594

4.554 ± 0.681

3.01 ± 0.636

5.822 ± 1.172

7.921 ± 0.743

7.089 ± 0.977

7.881 ± 0.894

1.109 ± 0.236

2.455 ± 0.604
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski