Torque teno mini virus 10

Taxonomy: Viruses; Anelloviridae; Betatorquevirus

Average proteome isoelectric point is 7.89

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 4 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A8DMQ5|A8DMQ5_9VIRU Capsid protein OS=Torque teno mini virus 10 OX=2065036 PE=3 SV=1
MM1 pKa = 7.61SKK3 pKa = 10.01QLQNPVYY10 pKa = 9.56YY11 pKa = 10.51GKK13 pKa = 10.47ALEE16 pKa = 4.34SQWRR20 pKa = 11.84NNIFNSHH27 pKa = 6.9DD28 pKa = 3.85LMCGCKK34 pKa = 10.43DD35 pKa = 3.59PVLHH39 pKa = 7.03LLIILNRR46 pKa = 11.84EE47 pKa = 3.75GNAPKK52 pKa = 10.39PEE54 pKa = 3.96EE55 pKa = 3.83DD56 pKa = 3.69VKK58 pKa = 11.3NIKK61 pKa = 10.3CLITGEE67 pKa = 4.21GAKK70 pKa = 10.63DD71 pKa = 3.63GEE73 pKa = 4.36KK74 pKa = 10.64DD75 pKa = 3.44IIPDD79 pKa = 3.59DD80 pKa = 4.13FEE82 pKa = 6.61PGEE85 pKa = 4.22LDD87 pKa = 3.65RR88 pKa = 11.84LFSEE92 pKa = 4.48LGEE95 pKa = 4.19TEE97 pKa = 4.83EE98 pKa = 4.44EE99 pKa = 4.52DD100 pKa = 4.94EE101 pKa = 5.26NPTDD105 pKa = 4.85DD106 pKa = 4.02GG107 pKa = 4.22

Molecular weight: 12.08 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A8DMQ7|A8DMQ7_9VIRU ORF4 OS=Torque teno mini virus 10 OX=2065036 PE=4 SV=1
MM1 pKa = 7.47ILVHH5 pKa = 6.39SLPGIFPVTSMKK17 pKa = 10.09EE18 pKa = 3.66YY19 pKa = 10.34KK20 pKa = 10.46YY21 pKa = 10.42RR22 pKa = 11.84IQKK25 pKa = 9.49QNHH28 pKa = 5.25KK29 pKa = 10.2QNSKK33 pKa = 10.46NGTGEE38 pKa = 3.96GTTLHH43 pKa = 6.68PKK45 pKa = 10.21LSKK48 pKa = 10.5EE49 pKa = 4.04LVATRR54 pKa = 11.84QLMKK58 pKa = 9.73MYY60 pKa = 10.72KK61 pKa = 10.04FLQEE65 pKa = 4.06PKK67 pKa = 9.09EE68 pKa = 4.32TCQYY72 pKa = 11.12ADD74 pKa = 3.16KK75 pKa = 10.52HH76 pKa = 5.17HH77 pKa = 5.93QRR79 pKa = 11.84TRR81 pKa = 11.84ARR83 pKa = 11.84KK84 pKa = 7.66RR85 pKa = 11.84KK86 pKa = 9.09KK87 pKa = 9.69RR88 pKa = 11.84RR89 pKa = 11.84HH90 pKa = 4.97HH91 pKa = 6.4RR92 pKa = 11.84PRR94 pKa = 11.84SKK96 pKa = 9.67STSSNEE102 pKa = 3.9SNTNSSSEE110 pKa = 4.25SSSDD114 pKa = 3.14

Molecular weight: 13.33 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

4

0

4

988

107

650

247.0

29.12

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

2.53 ± 0.554

1.518 ± 0.255

4.858 ± 1.089

6.073 ± 1.639

4.453 ± 0.791

4.858 ± 0.774

2.632 ± 0.711

4.757 ± 0.728

8.502 ± 0.949

6.984 ± 0.65

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.923 ± 0.333

6.579 ± 0.355

7.895 ± 0.867

5.364 ± 0.5

7.287 ± 0.994

5.668 ± 1.601

7.794 ± 1.11

3.441 ± 0.532

2.126 ± 0.682

4.757 ± 1.113
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski