Drosophila willistoni (Fruit fly)
Average proteome isoelectric point is 6.65
Get precalculated fractions of proteins
Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
All
Note: above files contain also dissociation constants (pKa)
Virtual 2D-PAGE plot for 14820 proteins (isoelectric point calculated using IPC2_protein)
Get csv file with sequences according to given criteria:
* You can choose from 21 different methods for calculating isoelectric point
Summary statistics related to proteome-wise predictions
Protein with the lowest isoelectric point:
>tr|B4MTW5|B4MTW5_DROWI BEN domain-containing protein OS=Drosophila willistoni OX=7260 GN=Dwil\GK23918 PE=4 SV=2
MM1 pKa = 7.31 FNKK4 pKa = 10.22 SYY6 pKa = 11.1 TNIILASTLLLCLITLPVSQADD28 pKa = 3.74 LMCYY32 pKa = 10.18 VCDD35 pKa = 5.0 DD36 pKa = 4.38 CATMPKK42 pKa = 10.1 DD43 pKa = 4.81 APLLACNEE51 pKa = 4.28 DD52 pKa = 3.71 FFNPGGSTEE61 pKa = 4.14 ASTVTTTTPASTTEE75 pKa = 4.29 AVQSTTPIEE84 pKa = 4.11 TSPMTIASTTEE95 pKa = 3.73 EE96 pKa = 4.43 SSTDD100 pKa = 3.52 LASTTTEE107 pKa = 4.12 EE108 pKa = 4.38 VTSTSTSEE116 pKa = 3.81 QSTEE120 pKa = 3.97 STEE123 pKa = 4.6 APIPTPNTAGPVEE136 pKa = 4.5 TTTGVPTPPQEE147 pKa = 5.19 DD148 pKa = 4.06 LDD150 pKa = 4.23 AVPASAANTTRR161 pKa = 11.84 LLQIGEE167 pKa = 4.25 EE168 pKa = 4.25 SSSNVTPLAIRR179 pKa = 11.84 QRR181 pKa = 11.84 RR182 pKa = 11.84 ALINTDD188 pKa = 3.47 YY189 pKa = 10.98 SYY191 pKa = 11.43 HH192 pKa = 6.95 CYY194 pKa = 9.92 IVQKK198 pKa = 10.11 SINGSTVTDD207 pKa = 4.24 RR208 pKa = 11.84 GCSRR212 pKa = 11.84 VSTYY216 pKa = 10.95 QSVCGLLMEE225 pKa = 5.06 QNNNTQLSNCDD236 pKa = 3.59 PCSMNACNGSSLLQNSLLVTFLMAAIAALMQANVLYY272 pKa = 10.84 KK273 pKa = 10.46 KK274 pKa = 9.65 MRR276 pKa = 11.84 LISLLLITLICAGATIWSANALQCYY301 pKa = 8.68 EE302 pKa = 4.81 CIGKK306 pKa = 9.12 EE307 pKa = 3.9 CDD309 pKa = 3.39 EE310 pKa = 4.31 LTEE313 pKa = 4.05 EE314 pKa = 4.82 HH315 pKa = 6.91 LVSCNVDD322 pKa = 3.18 NDD324 pKa = 4.13 PVTTPSDD331 pKa = 3.72 EE332 pKa = 4.26 TDD334 pKa = 3.5 STDD337 pKa = 3.33 DD338 pKa = 3.68 TTDD341 pKa = 2.74 KK342 pKa = 10.08 STPSATSSTTNGVTTSSPGTTTGTTGTTDD371 pKa = 3.6 ADD373 pKa = 3.99 TTTTTDD379 pKa = 2.8 EE380 pKa = 5.29 GYY382 pKa = 10.88 SSTIEE387 pKa = 4.39 DD388 pKa = 3.98 EE389 pKa = 4.82 SSVSTDD395 pKa = 3.92 DD396 pKa = 5.49 DD397 pKa = 4.41 SSSSNTTDD405 pKa = 4.63 DD406 pKa = 4.49 DD407 pKa = 4.74 SSTNTEE413 pKa = 4.13 SSTSDD418 pKa = 3.03 TTEE421 pKa = 4.65 DD422 pKa = 4.06 DD423 pKa = 3.93 SSSSSNDD430 pKa = 3.21 DD431 pKa = 3.46 SSSSSTTEE439 pKa = 3.87 STSEE443 pKa = 3.89 SSPNTEE449 pKa = 4.07 SSTSDD454 pKa = 3.03 TTEE457 pKa = 4.65 DD458 pKa = 4.06 DD459 pKa = 3.93 SSSSSNDD466 pKa = 3.25 DD467 pKa = 3.3 SSSSITTEE475 pKa = 3.9 SSSEE479 pKa = 3.99 SSPNAEE485 pKa = 4.24 SSTSDD490 pKa = 3.07 TTEE493 pKa = 4.67 DD494 pKa = 4.14 DD495 pKa = 3.91 SSSSTNADD503 pKa = 3.08 SSSSNTTDD511 pKa = 3.37 EE512 pKa = 4.84 DD513 pKa = 4.32 SSTNTEE519 pKa = 4.09 SSTSDD524 pKa = 3.03 TTEE527 pKa = 4.65 DD528 pKa = 4.06 DD529 pKa = 3.93 SSSSSNDD536 pKa = 3.04 EE537 pKa = 4.06 SSSSITTEE545 pKa = 4.03 SASEE549 pKa = 4.01 SSPNAEE555 pKa = 4.24 SSTSDD560 pKa = 3.07 TTEE563 pKa = 4.65 DD564 pKa = 4.06 DD565 pKa = 3.93 SSSSSNDD572 pKa = 3.24 DD573 pKa = 3.31 SSSTIVTEE581 pKa = 4.33 SEE583 pKa = 4.38 SPSQSSIDD591 pKa = 3.96 AEE593 pKa = 4.49 SSTSGIIEE601 pKa = 4.95 DD602 pKa = 4.74 DD603 pKa = 3.7 SSSASSGASEE613 pKa = 4.32 SSSASSEE620 pKa = 4.25 TSSSGAEE627 pKa = 3.91 TTVGSTEE634 pKa = 3.96 APVTSRR640 pKa = 11.84 AKK642 pKa = 10.25 RR643 pKa = 11.84 SLAARR648 pKa = 11.84 ATDD651 pKa = 3.91 RR652 pKa = 11.84 LLQNYY657 pKa = 9.21 RR658 pKa = 11.84 SYY660 pKa = 11.77 ARR662 pKa = 11.84 YY663 pKa = 9.59 RR664 pKa = 11.84 RR665 pKa = 11.84 DD666 pKa = 2.93 AEE668 pKa = 4.15 GQIRR672 pKa = 11.84 TTACYY677 pKa = 10.44 SIVKK681 pKa = 10.35 DD682 pKa = 3.58 NVIQRR687 pKa = 11.84 GCIRR691 pKa = 11.84 IPYY694 pKa = 9.21 GKK696 pKa = 9.79 GGCEE700 pKa = 3.41 AVRR703 pKa = 11.84 IEE705 pKa = 4.36 VNLAADD711 pKa = 4.28 SIGDD715 pKa = 3.78 EE716 pKa = 4.34 CDD718 pKa = 2.95 VCQMDD723 pKa = 4.02 KK724 pKa = 11.15 CNSSTSLRR732 pKa = 11.84 LSLGLMLLGLITFGLRR748 pKa = 11.84 SLL750 pKa = 4.12
Molecular weight: 78.08 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 3.705
IPC2_protein 3.656
IPC_protein 3.694
Toseland 3.465
ProMoST 3.834
Dawson 3.668
Bjellqvist 3.821
Wikipedia 3.592
Rodwell 3.516
Grimsley 3.376
Solomon 3.668
Lehninger 3.63
Nozaki 3.783
DTASelect 3.999
Thurlkill 3.503
EMBOSS 3.605
Sillero 3.808
Patrickios 1.049
IPC_peptide 3.668
IPC2_peptide 3.783
IPC2.peptide.svr19 3.74
Protein with the highest isoelectric point:
>tr|B4NJF2|B4NJF2_DROWI Serine/threonine-protein phosphatase OS=Drosophila willistoni OX=7260 GN=Dwil\GK12844 PE=3 SV=1
MM1 pKa = 7.71 PKK3 pKa = 10.26 SLLDD7 pKa = 3.86 YY8 pKa = 10.8 SPHH11 pKa = 6.65 GYY13 pKa = 10.23 DD14 pKa = 2.71 WLFLFVVFFIFAGGLGNILVCLAVALDD41 pKa = 3.71 RR42 pKa = 11.84 KK43 pKa = 9.47 LQNVTNYY50 pKa = 10.16 FLFSLAIADD59 pKa = 4.27 LLVSLFVMPMGAIPAFLGYY78 pKa = 9.61 WPLGFTWCNIYY89 pKa = 8.07 VTCDD93 pKa = 3.17 VLACSSSILHH103 pKa = 5.91 MCFISLGRR111 pKa = 11.84 YY112 pKa = 9.06 LGIRR116 pKa = 11.84 NPLGSRR122 pKa = 11.84 HH123 pKa = 6.34 RR124 pKa = 11.84 STKK127 pKa = 9.86 RR128 pKa = 11.84 LAGIKK133 pKa = 9.64 IAIVWVMAMMVSSSITVLGLVNKK156 pKa = 9.48 HH157 pKa = 6.27 NIMPEE162 pKa = 3.8 PNICMINNRR171 pKa = 11.84 AFWVFGSLVAFYY183 pKa = 10.53 IPMLMMVTTYY193 pKa = 11.64 ALTIPLLRR201 pKa = 11.84 KK202 pKa = 9.14 KK203 pKa = 10.66 ARR205 pKa = 11.84 FAAEE209 pKa = 4.06 HH210 pKa = 6.84 PEE212 pKa = 4.03 SEE214 pKa = 4.24 LFRR217 pKa = 11.84 RR218 pKa = 11.84 LGGRR222 pKa = 11.84 FTIRR226 pKa = 11.84 PQHH229 pKa = 5.79 SQQQLQMHH237 pKa = 6.74 SSFSSNSNKK246 pKa = 9.24 FLAMSDD252 pKa = 3.36 SNRR255 pKa = 11.84 NFNSSDD261 pKa = 3.18 RR262 pKa = 11.84 GGGRR266 pKa = 11.84 GGDD269 pKa = 3.44 NSTEE273 pKa = 3.96 RR274 pKa = 11.84 PLMQQRR280 pKa = 11.84 TTSNRR285 pKa = 11.84 SMGAGSVSFRR295 pKa = 11.84 NVTNGGRR302 pKa = 11.84 TAFGVGMGAGGRR314 pKa = 11.84 SSFRR318 pKa = 11.84 FAGGSILRR326 pKa = 11.84 QSSTPTTTSTSLSSSCPSSTATSVRR351 pKa = 11.84 GGRR354 pKa = 11.84 SQQTSSFWRR363 pKa = 11.84 KK364 pKa = 9.57 HH365 pKa = 4.85 GGNPNLMDD373 pKa = 3.28 SHH375 pKa = 6.74 PNRR378 pKa = 11.84 RR379 pKa = 11.84 ASVRR383 pKa = 11.84 VSMSQPQLGYY393 pKa = 7.52 PTNGNGGNGGGIGGNEE409 pKa = 4.26 SPTAVTSSSCTTPGSISNLVNVATIQGQSMDD440 pKa = 3.38 NHH442 pKa = 5.53 QLEE445 pKa = 5.09 HH446 pKa = 6.09 GTTMTATITSAATTAASASARR467 pKa = 11.84 ATTTTTGEE475 pKa = 4.1 RR476 pKa = 11.84 RR477 pKa = 11.84 HH478 pKa = 6.08 KK479 pKa = 10.53 LRR481 pKa = 11.84 PFKK484 pKa = 10.6 FALNRR489 pKa = 11.84 VATPTLNLRR498 pKa = 11.84 FLNNRR503 pKa = 11.84 NKK505 pKa = 10.44 RR506 pKa = 11.84 NSLSANAVATEE517 pKa = 3.99 QKK519 pKa = 8.69 ATKK522 pKa = 10.48 VLGLVFFTFVLCWSPFFILNIIFAACPQCQVSEE555 pKa = 4.41 HH556 pKa = 5.38 VVNTCLWLGYY566 pKa = 10.09 VSSTINPIIYY576 pKa = 9.08 TIFNRR581 pKa = 11.84 TFRR584 pKa = 11.84 AAFIRR589 pKa = 11.84 LLKK592 pKa = 10.36 CNCEE596 pKa = 3.68 RR597 pKa = 11.84 SGRR600 pKa = 11.84 PLRR603 pKa = 11.84 FRR605 pKa = 11.84 SVTEE609 pKa = 3.85 GRR611 pKa = 11.84 SALSLCAPSALPLAISFQGAPLMTPSTTNATPLSEE646 pKa = 4.21 FRR648 pKa = 11.84 GSYY651 pKa = 10.02 TITDD655 pKa = 3.95 DD656 pKa = 3.51 EE657 pKa = 4.72 CC658 pKa = 6.48
Molecular weight: 71.62 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 9.352
IPC2_protein 9.589
IPC_protein 10.394
Toseland 10.438
ProMoST 10.189
Dawson 10.584
Bjellqvist 10.35
Wikipedia 10.804
Rodwell 10.745
Grimsley 10.657
Solomon 10.672
Lehninger 10.628
Nozaki 10.496
DTASelect 10.321
Thurlkill 10.467
EMBOSS 10.847
Sillero 10.526
Patrickios 10.365
IPC_peptide 10.672
IPC2_peptide 9.706
IPC2.peptide.svr19 8.468
Peptides (in silico digests for buttom-up proteomics)
Below you can find
in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.
Try ESI
ChTry ESI
ArgC ESI
LysN ESI
TryLysC ESI
Try MALDI
ChTry MALDI
ArgC MALDI
LysN MALDI
TryLysC MALDI
Try LTQ
ChTry LTQ
ArgC LTQ
LysN LTQ
TryLysC LTQ
Try MSlow
ChTry MSlow
ArgC MSlow
LysN MSlow
TryLysC MSlow
Try MShigh
ChTry MShigh
ArgC MShigh
LysN MShigh
TryLysC MShigh
General Statistics
Number of major isoforms
Number of additional isoforms
Number of all proteins
Number of amino acids
Min. Seq. Length
Max. Seq. Length
Avg. Seq. Length
Avg. Mol. Weight
13713
1107
14820
8086281
23
20907
545.6
60.97
Amino acid frequency
Ala
Cys
Asp
Glu
Phe
Gly
His
Ile
Lys
Leu
7.226 ± 0.025
1.833 ± 0.031
5.293 ± 0.017
6.423 ± 0.04
3.488 ± 0.017
5.964 ± 0.026
2.651 ± 0.012
5.192 ± 0.016
5.688 ± 0.028
9.135 ± 0.034
Met
Asn
Gln
Pro
Arg
Ser
Thr
Val
Trp
Tyr
2.362 ± 0.013
5.016 ± 0.018
5.25 ± 0.031
5.357 ± 0.031
5.311 ± 0.02
8.181 ± 0.029
5.908 ± 0.025
5.685 ± 0.017
0.999 ± 0.008
3.032 ± 0.015
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level
Most of the basic statistics you can see at this page can be downloaded from this CSV file
For dipeptide frequency statistics click here