Chalara elegans RNA Virus 1

Taxonomy: Viruses; Riboviria; Orthornavirae; Duplornaviricota; Chrymotiviricetes; Ghabrivirales; Totiviridae; Victorivirus

Average proteome isoelectric point is 6.48

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 1 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|Q6Q425|Q6Q425_9VIRU Coat protein OS=Chalara elegans RNA Virus 1 OX=267285 PE=4 SV=1
MM1 pKa = 7.58EE2 pKa = 4.73ATSLNHH8 pKa = 6.28FLSGVIAAPKK18 pKa = 9.75GGRR21 pKa = 11.84LAEE24 pKa = 4.35DD25 pKa = 3.44SAFRR29 pKa = 11.84RR30 pKa = 11.84YY31 pKa = 9.13RR32 pKa = 11.84AHH34 pKa = 6.3VRR36 pKa = 11.84TTATIGGNTDD46 pKa = 2.62ARR48 pKa = 11.84NAFIRR53 pKa = 11.84YY54 pKa = 7.66EE55 pKa = 4.13VGRR58 pKa = 11.84SSGKK62 pKa = 10.18RR63 pKa = 11.84GQLLAAPPDD72 pKa = 3.54DD73 pKa = 3.58SRR75 pKa = 11.84RR76 pKa = 11.84IEE78 pKa = 3.95ASYY81 pKa = 8.29PTNAVLAEE89 pKa = 4.51DD90 pKa = 4.25FLGLAKK96 pKa = 10.32KK97 pKa = 10.38YY98 pKa = 10.88SNFSAQFQFSSLAAVAEE115 pKa = 4.22RR116 pKa = 11.84LAKK119 pKa = 10.34GLAVHH124 pKa = 6.44ATVADD129 pKa = 3.73VDD131 pKa = 4.57SVALRR136 pKa = 11.84GGAPLIVAGLGTYY149 pKa = 9.96DD150 pKa = 3.84GPINSLISSVFIPRR164 pKa = 11.84LVNNVLTGDD173 pKa = 3.96VFSVLANAIAGEE185 pKa = 4.34GASIATDD192 pKa = 3.04IAEE195 pKa = 4.66IDD197 pKa = 3.59PSTRR201 pKa = 11.84QPVIPEE207 pKa = 3.61VDD209 pKa = 2.93GDD211 pKa = 4.3GFAKK215 pKa = 10.57AATEE219 pKa = 3.73ALRR222 pKa = 11.84IVGANMAQSDD232 pKa = 3.73QGLLFSLAVTRR243 pKa = 11.84GIHH246 pKa = 6.41SVVSWLPTAMKK257 pKa = 10.28AALLGICCVWTFQCPFVGFITGSKK281 pKa = 9.69LHH283 pKa = 6.6GPPSLLSTVSRR294 pKa = 11.84SVLLCRR300 pKa = 11.84CHH302 pKa = 6.17CTDD305 pKa = 3.73PAAAVAPSDD314 pKa = 3.76PGEE317 pKa = 4.33NYY319 pKa = 10.15NGEE322 pKa = 4.24WFPTFYY328 pKa = 10.8SGTKK332 pKa = 10.37GGDD335 pKa = 3.15PTVRR339 pKa = 11.84PGGDD343 pKa = 3.21CPGNSEE349 pKa = 3.84TSGRR353 pKa = 11.84IRR355 pKa = 11.84SQLLADD361 pKa = 3.76CEE363 pKa = 4.46KK364 pKa = 10.61FFRR367 pKa = 11.84NYY369 pKa = 9.52IPALGRR375 pKa = 11.84IFGLTGSPNLAVTVAVGMSRR395 pKa = 11.84FLHH398 pKa = 6.47ADD400 pKa = 3.35PRR402 pKa = 11.84HH403 pKa = 5.52LRR405 pKa = 11.84YY406 pKa = 10.1ASVAPWYY413 pKa = 9.16WIEE416 pKa = 4.11PTSLLPSDD424 pKa = 4.32FLGSVAEE431 pKa = 4.3MNGSGSFGGKK441 pKa = 10.05DD442 pKa = 3.21STKK445 pKa = 10.67TKK447 pKa = 10.42LAWEE451 pKa = 5.06DD452 pKa = 3.22IEE454 pKa = 5.09LAGDD458 pKa = 3.54RR459 pKa = 11.84DD460 pKa = 4.4TTFSAYY466 pKa = 9.51RR467 pKa = 11.84AKK469 pKa = 10.46FLSPRR474 pKa = 11.84RR475 pKa = 11.84AWFMAHH481 pKa = 6.06WNGHH485 pKa = 5.58PDD487 pKa = 3.35NGLGCIRR494 pKa = 11.84LRR496 pKa = 11.84QADD499 pKa = 4.1PNGFIHH505 pKa = 7.26PGRR508 pKa = 11.84GTSGADD514 pKa = 3.07LRR516 pKa = 11.84DD517 pKa = 3.75RR518 pKa = 11.84LEE520 pKa = 4.98DD521 pKa = 4.0DD522 pKa = 5.15APISDD527 pKa = 4.25YY528 pKa = 11.34LWDD531 pKa = 4.52RR532 pKa = 11.84GQSPFCAPGEE542 pKa = 3.85LLNLGSTIGFLVRR555 pKa = 11.84HH556 pKa = 5.21VTFDD560 pKa = 3.76DD561 pKa = 4.27DD562 pKa = 5.27GIPTTEE568 pKa = 4.18HH569 pKa = 6.1VPTSRR574 pKa = 11.84EE575 pKa = 3.93FLDD578 pKa = 3.47TTVTIEE584 pKa = 3.67VGRR587 pKa = 11.84PLSISIGKK595 pKa = 8.79SNCPDD600 pKa = 3.0SKK602 pKa = 10.99ARR604 pKa = 11.84RR605 pKa = 11.84ARR607 pKa = 11.84TRR609 pKa = 11.84ATIEE613 pKa = 3.63LGAASRR619 pKa = 11.84RR620 pKa = 11.84ARR622 pKa = 11.84AFGSAAVAEE631 pKa = 4.61MPTLSTAPRR640 pKa = 11.84ALTFAPSRR648 pKa = 11.84LMVKK652 pKa = 9.34DD653 pKa = 3.36TGGGAGSSRR662 pKa = 11.84HH663 pKa = 5.65GADD666 pKa = 3.19SGGSGADD673 pKa = 3.34DD674 pKa = 3.94AARR677 pKa = 11.84KK678 pKa = 9.7ADD680 pKa = 3.83GVPVRR685 pKa = 11.84ATAHH689 pKa = 5.02NQPVRR694 pKa = 11.84FPTLANPTGPTRR706 pKa = 11.84SSAAPAAAARR716 pKa = 11.84DD717 pKa = 3.83QSAGGPSVDD726 pKa = 3.17IVRR729 pKa = 11.84SGGDD733 pKa = 2.99AASEE737 pKa = 4.35VGSDD741 pKa = 3.76VAPAPAPGVEE751 pKa = 4.2SGVVSSSVAAPTNEE765 pKa = 3.24GRR767 pKa = 11.84NDD769 pKa = 3.16VV770 pKa = 3.77

Molecular weight: 80.7 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|Q6Q425|Q6Q425_9VIRU Coat protein OS=Chalara elegans RNA Virus 1 OX=267285 PE=4 SV=1
MM1 pKa = 7.58EE2 pKa = 4.73ATSLNHH8 pKa = 6.28FLSGVIAAPKK18 pKa = 9.75GGRR21 pKa = 11.84LAEE24 pKa = 4.35DD25 pKa = 3.44SAFRR29 pKa = 11.84RR30 pKa = 11.84YY31 pKa = 9.13RR32 pKa = 11.84AHH34 pKa = 6.3VRR36 pKa = 11.84TTATIGGNTDD46 pKa = 2.62ARR48 pKa = 11.84NAFIRR53 pKa = 11.84YY54 pKa = 7.66EE55 pKa = 4.13VGRR58 pKa = 11.84SSGKK62 pKa = 10.18RR63 pKa = 11.84GQLLAAPPDD72 pKa = 3.54DD73 pKa = 3.58SRR75 pKa = 11.84RR76 pKa = 11.84IEE78 pKa = 3.95ASYY81 pKa = 8.29PTNAVLAEE89 pKa = 4.51DD90 pKa = 4.25FLGLAKK96 pKa = 10.32KK97 pKa = 10.38YY98 pKa = 10.88SNFSAQFQFSSLAAVAEE115 pKa = 4.22RR116 pKa = 11.84LAKK119 pKa = 10.34GLAVHH124 pKa = 6.44ATVADD129 pKa = 3.73VDD131 pKa = 4.57SVALRR136 pKa = 11.84GGAPLIVAGLGTYY149 pKa = 9.96DD150 pKa = 3.84GPINSLISSVFIPRR164 pKa = 11.84LVNNVLTGDD173 pKa = 3.96VFSVLANAIAGEE185 pKa = 4.34GASIATDD192 pKa = 3.04IAEE195 pKa = 4.66IDD197 pKa = 3.59PSTRR201 pKa = 11.84QPVIPEE207 pKa = 3.61VDD209 pKa = 2.93GDD211 pKa = 4.3GFAKK215 pKa = 10.57AATEE219 pKa = 3.73ALRR222 pKa = 11.84IVGANMAQSDD232 pKa = 3.73QGLLFSLAVTRR243 pKa = 11.84GIHH246 pKa = 6.41SVVSWLPTAMKK257 pKa = 10.28AALLGICCVWTFQCPFVGFITGSKK281 pKa = 9.69LHH283 pKa = 6.6GPPSLLSTVSRR294 pKa = 11.84SVLLCRR300 pKa = 11.84CHH302 pKa = 6.17CTDD305 pKa = 3.73PAAAVAPSDD314 pKa = 3.76PGEE317 pKa = 4.33NYY319 pKa = 10.15NGEE322 pKa = 4.24WFPTFYY328 pKa = 10.8SGTKK332 pKa = 10.37GGDD335 pKa = 3.15PTVRR339 pKa = 11.84PGGDD343 pKa = 3.21CPGNSEE349 pKa = 3.84TSGRR353 pKa = 11.84IRR355 pKa = 11.84SQLLADD361 pKa = 3.76CEE363 pKa = 4.46KK364 pKa = 10.61FFRR367 pKa = 11.84NYY369 pKa = 9.52IPALGRR375 pKa = 11.84IFGLTGSPNLAVTVAVGMSRR395 pKa = 11.84FLHH398 pKa = 6.47ADD400 pKa = 3.35PRR402 pKa = 11.84HH403 pKa = 5.52LRR405 pKa = 11.84YY406 pKa = 10.1ASVAPWYY413 pKa = 9.16WIEE416 pKa = 4.11PTSLLPSDD424 pKa = 4.32FLGSVAEE431 pKa = 4.3MNGSGSFGGKK441 pKa = 10.05DD442 pKa = 3.21STKK445 pKa = 10.67TKK447 pKa = 10.42LAWEE451 pKa = 5.06DD452 pKa = 3.22IEE454 pKa = 5.09LAGDD458 pKa = 3.54RR459 pKa = 11.84DD460 pKa = 4.4TTFSAYY466 pKa = 9.51RR467 pKa = 11.84AKK469 pKa = 10.46FLSPRR474 pKa = 11.84RR475 pKa = 11.84AWFMAHH481 pKa = 6.06WNGHH485 pKa = 5.58PDD487 pKa = 3.35NGLGCIRR494 pKa = 11.84LRR496 pKa = 11.84QADD499 pKa = 4.1PNGFIHH505 pKa = 7.26PGRR508 pKa = 11.84GTSGADD514 pKa = 3.07LRR516 pKa = 11.84DD517 pKa = 3.75RR518 pKa = 11.84LEE520 pKa = 4.98DD521 pKa = 4.0DD522 pKa = 5.15APISDD527 pKa = 4.25YY528 pKa = 11.34LWDD531 pKa = 4.52RR532 pKa = 11.84GQSPFCAPGEE542 pKa = 3.85LLNLGSTIGFLVRR555 pKa = 11.84HH556 pKa = 5.21VTFDD560 pKa = 3.76DD561 pKa = 4.27DD562 pKa = 5.27GIPTTEE568 pKa = 4.18HH569 pKa = 6.1VPTSRR574 pKa = 11.84EE575 pKa = 3.93FLDD578 pKa = 3.47TTVTIEE584 pKa = 3.67VGRR587 pKa = 11.84PLSISIGKK595 pKa = 8.79SNCPDD600 pKa = 3.0SKK602 pKa = 10.99ARR604 pKa = 11.84RR605 pKa = 11.84ARR607 pKa = 11.84TRR609 pKa = 11.84ATIEE613 pKa = 3.63LGAASRR619 pKa = 11.84RR620 pKa = 11.84ARR622 pKa = 11.84AFGSAAVAEE631 pKa = 4.61MPTLSTAPRR640 pKa = 11.84ALTFAPSRR648 pKa = 11.84LMVKK652 pKa = 9.34DD653 pKa = 3.36TGGGAGSSRR662 pKa = 11.84HH663 pKa = 5.65GADD666 pKa = 3.19SGGSGADD673 pKa = 3.34DD674 pKa = 3.94AARR677 pKa = 11.84KK678 pKa = 9.7ADD680 pKa = 3.83GVPVRR685 pKa = 11.84ATAHH689 pKa = 5.02NQPVRR694 pKa = 11.84FPTLANPTGPTRR706 pKa = 11.84SSAAPAAAARR716 pKa = 11.84DD717 pKa = 3.83QSAGGPSVDD726 pKa = 3.17IVRR729 pKa = 11.84SGGDD733 pKa = 2.99AASEE737 pKa = 4.35VGSDD741 pKa = 3.76VAPAPAPGVEE751 pKa = 4.2SGVVSSSVAAPTNEE765 pKa = 3.24GRR767 pKa = 11.84NDD769 pKa = 3.16VV770 pKa = 3.77

Molecular weight: 80.7 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

1

0

1

770

770

770

770.0

80.7

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

12.987 ± 0.0

1.429 ± 0.0

6.234 ± 0.0

3.636 ± 0.0

4.286 ± 0.0

10.39 ± 0.0

1.948 ± 0.0

4.156 ± 0.0

2.338 ± 0.0

7.662 ± 0.0

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.039 ± 0.0

3.247 ± 0.0

6.753 ± 0.0

1.558 ± 0.0

7.403 ± 0.0

9.221 ± 0.0

6.364 ± 0.0

6.623 ± 0.0

1.169 ± 0.0

1.558 ± 0.0
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski