Cellulomonas soli

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Actinobacteria; Actinomycetia; Micrococcales; Cellulomonadaceae; Cellulomonas

Average proteome isoelectric point is 6.02

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3847 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A512PAN6|A0A512PAN6_9CELL Uncharacterized protein OS=Cellulomonas soli OX=931535 GN=CSO01_09940 PE=4 SV=1
MM1 pKa = 7.52CLAGATAWALDD12 pKa = 3.57RR13 pKa = 11.84FVIEE17 pKa = 4.27HH18 pKa = 5.82VEE20 pKa = 3.95IADD23 pKa = 3.51VSAYY27 pKa = 9.29EE28 pKa = 4.0AAQTGTVTTSTTTSASDD45 pKa = 3.63ALVTDD50 pKa = 4.12TTYY53 pKa = 11.27EE54 pKa = 3.99SDD56 pKa = 3.84DD57 pKa = 3.73ASITISTVTTGSGEE71 pKa = 4.1ATVTYY76 pKa = 9.96YY77 pKa = 11.02VADD80 pKa = 3.68VTLTDD85 pKa = 3.51ATVLRR90 pKa = 11.84SAFAQDD96 pKa = 3.45AFGEE100 pKa = 4.45NITEE104 pKa = 4.12NTSDD108 pKa = 3.16IAADD112 pKa = 3.53NDD114 pKa = 3.76AVFAINGDD122 pKa = 3.87YY123 pKa = 11.14YY124 pKa = 11.14GFRR127 pKa = 11.84STGIVIRR134 pKa = 11.84NGVVYY139 pKa = 9.99RR140 pKa = 11.84DD141 pKa = 3.19EE142 pKa = 4.38GARR145 pKa = 11.84EE146 pKa = 3.7GLAFYY151 pKa = 10.56RR152 pKa = 11.84DD153 pKa = 3.68GHH155 pKa = 6.34VEE157 pKa = 4.21VYY159 pKa = 11.0DD160 pKa = 3.79EE161 pKa = 4.39TTTTAEE167 pKa = 4.03EE168 pKa = 3.92LLAAGVWNTLSFGPALLEE186 pKa = 4.74DD187 pKa = 4.16GQVVDD192 pKa = 5.36GIEE195 pKa = 4.05DD196 pKa = 3.81VEE198 pKa = 4.28VDD200 pKa = 3.87TNVGNHH206 pKa = 6.74SIQGDD211 pKa = 3.79QPRR214 pKa = 11.84TAIGVIDD221 pKa = 4.7DD222 pKa = 3.62NHH224 pKa = 6.99LVFVVVDD231 pKa = 4.2GRR233 pKa = 11.84STGYY237 pKa = 10.15SAGVDD242 pKa = 3.54MTEE245 pKa = 4.72LAQIMADD252 pKa = 3.94LGATTAYY259 pKa = 10.52NIDD262 pKa = 3.82GGGSSTMVFDD272 pKa = 5.14GEE274 pKa = 4.86LVNNPLGKK282 pKa = 8.98GTEE285 pKa = 4.16RR286 pKa = 11.84GTSDD290 pKa = 2.78ILYY293 pKa = 10.14IAGG296 pKa = 3.68

Molecular weight: 31.07 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A512PD09|A0A512PD09_9CELL Uncharacterized protein OS=Cellulomonas soli OX=931535 GN=CSO01_18050 PE=4 SV=1
MM1 pKa = 6.74VTPSHH6 pKa = 6.75LRR8 pKa = 11.84RR9 pKa = 11.84TVAPAVVLGTRR20 pKa = 11.84PPRR23 pKa = 11.84VARR26 pKa = 11.84RR27 pKa = 11.84ARR29 pKa = 11.84GGRR32 pKa = 11.84ALARR36 pKa = 11.84VVVLAAVVGVLVAVLLVAPASSGAGEE62 pKa = 4.28LLVGAVAFGSTLLGAGAVVLVRR84 pKa = 11.84RR85 pKa = 11.84LRR87 pKa = 11.84RR88 pKa = 11.84SRR90 pKa = 11.84TRR92 pKa = 3.06

Molecular weight: 9.39 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3847

0

3847

1283081

39

2578

333.5

35.27

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

14.434 ± 0.053

0.568 ± 0.009

6.402 ± 0.033

5.09 ± 0.037

2.46 ± 0.022

9.379 ± 0.037

2.123 ± 0.023

2.875 ± 0.028

1.292 ± 0.023

10.495 ± 0.048

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.533 ± 0.013

1.383 ± 0.018

5.932 ± 0.035

2.847 ± 0.019

7.642 ± 0.044

5.173 ± 0.036

6.751 ± 0.05

10.294 ± 0.043

1.536 ± 0.019

1.791 ± 0.019
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski