Dragonfly associated cyclovirus 5

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cirlivirales; Circoviridae; Cyclovirus

Average proteome isoelectric point is 8.8

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|K0A152|K0A152_9CIRC Putative capsid protein OS=Dragonfly associated cyclovirus 5 OX=1234883 PE=4 SV=1
MM1 pKa = 7.49ANCVVRR7 pKa = 11.84RR8 pKa = 11.84FCFTLNNFTEE18 pKa = 4.23EE19 pKa = 4.34EE20 pKa = 4.46YY21 pKa = 11.11EE22 pKa = 4.05KK23 pKa = 10.17VTRR26 pKa = 11.84FIQDD30 pKa = 3.06YY31 pKa = 9.34CKK33 pKa = 10.81YY34 pKa = 10.13GIVGNEE40 pKa = 3.89TAPTTGTIHH49 pKa = 7.45LPGFCNLTKK58 pKa = 10.52GMRR61 pKa = 11.84FNNIKK66 pKa = 10.5SKK68 pKa = 10.37LATRR72 pKa = 11.84IHH74 pKa = 6.51LEE76 pKa = 3.96KK77 pKa = 11.17ANGTDD82 pKa = 3.41EE83 pKa = 4.22QNQIYY88 pKa = 9.43CRR90 pKa = 11.84KK91 pKa = 9.5SGTYY95 pKa = 9.25FEE97 pKa = 5.43KK98 pKa = 10.26GTPVGQGKK106 pKa = 7.85RR107 pKa = 11.84TDD109 pKa = 3.41LVSLVEE115 pKa = 5.0GIQNGQIRR123 pKa = 11.84LSDD126 pKa = 3.27IAKK129 pKa = 9.21DD130 pKa = 3.51HH131 pKa = 7.14PIAFIKK137 pKa = 7.71YY138 pKa = 7.66HH139 pKa = 6.07RR140 pKa = 11.84GIRR143 pKa = 11.84EE144 pKa = 3.8YY145 pKa = 11.1LQLTKK150 pKa = 10.21PVQPRR155 pKa = 11.84MFKK158 pKa = 8.93TWVYY162 pKa = 9.53YY163 pKa = 9.52YY164 pKa = 9.7WGPTGSGKK172 pKa = 9.98SSRR175 pKa = 11.84ALKK178 pKa = 10.0EE179 pKa = 3.61AMEE182 pKa = 4.5IEE184 pKa = 3.96GEE186 pKa = 4.07IYY188 pKa = 10.52YY189 pKa = 10.25KK190 pKa = 10.56PRR192 pKa = 11.84GLWWDD197 pKa = 4.71GYY199 pKa = 9.4HH200 pKa = 5.68QQDD203 pKa = 3.74NVIIDD208 pKa = 4.59DD209 pKa = 4.41FYY211 pKa = 11.73GWIKK215 pKa = 9.81YY216 pKa = 10.71DD217 pKa = 3.64EE218 pKa = 4.36MLKK221 pKa = 10.5IMDD224 pKa = 4.59RR225 pKa = 11.84YY226 pKa = 9.01PYY228 pKa = 9.88KK229 pKa = 10.71VQVKK233 pKa = 10.29GGFEE237 pKa = 4.2EE238 pKa = 4.82FTSRR242 pKa = 11.84RR243 pKa = 11.84IWITSNVDD251 pKa = 2.59TDD253 pKa = 3.55QLYY256 pKa = 10.61KK257 pKa = 10.85FIGYY261 pKa = 9.98VSDD264 pKa = 3.62AFDD267 pKa = 3.42RR268 pKa = 11.84RR269 pKa = 11.84ITNKK273 pKa = 9.82VYY275 pKa = 10.47IDD277 pKa = 3.47

Molecular weight: 32.53 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|K0A152|K0A152_9CIRC Putative capsid protein OS=Dragonfly associated cyclovirus 5 OX=1234883 PE=4 SV=1
MM1 pKa = 7.48ARR3 pKa = 11.84FKK5 pKa = 10.86RR6 pKa = 11.84VFRR9 pKa = 11.84RR10 pKa = 11.84PRR12 pKa = 11.84RR13 pKa = 11.84VVRR16 pKa = 11.84RR17 pKa = 11.84RR18 pKa = 11.84SRR20 pKa = 11.84MFRR23 pKa = 11.84RR24 pKa = 11.84RR25 pKa = 11.84YY26 pKa = 8.9RR27 pKa = 11.84RR28 pKa = 11.84TRR30 pKa = 11.84KK31 pKa = 8.47RR32 pKa = 11.84TSGTMWCKK40 pKa = 8.19LTKK43 pKa = 10.37VATVQVKK50 pKa = 10.38NDD52 pKa = 3.56STSVWSGSFYY62 pKa = 10.7PNDD65 pKa = 3.24FPEE68 pKa = 4.52YY69 pKa = 10.63VSLAPNFEE77 pKa = 5.07AIQFVKK83 pKa = 9.95MRR85 pKa = 11.84MRR87 pKa = 11.84VMPLQNVSNNSTSQTPAYY105 pKa = 10.68AMLPWHH111 pKa = 6.81KK112 pKa = 10.58GGPLQKK118 pKa = 10.72AFNTYY123 pKa = 10.81LSVDD127 pKa = 2.62KK128 pKa = 11.07CKK130 pKa = 10.2IYY132 pKa = 10.72RR133 pKa = 11.84QTQQGYY139 pKa = 7.67QSYY142 pKa = 9.7KK143 pKa = 10.64CSVLQNAFTKK153 pKa = 10.34SSSAISEE160 pKa = 4.34DD161 pKa = 3.58FSLATVTKK169 pKa = 7.79WCPRR173 pKa = 11.84IEE175 pKa = 4.35RR176 pKa = 11.84PNNMEE181 pKa = 3.96AKK183 pKa = 9.88QPQIYY188 pKa = 8.89TGIVVFQGEE197 pKa = 4.14NTMAGRR203 pKa = 11.84TTAFNIIQDD212 pKa = 3.59VWVKK216 pKa = 10.46CINQSNFSII225 pKa = 4.27

Molecular weight: 26.28 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

502

225

277

251.0

29.4

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

4.382 ± 0.884

1.992 ± 0.146

4.183 ± 1.242

4.582 ± 1.213

5.378 ± 0.253

6.175 ± 1.659

1.195 ± 0.476

6.574 ± 1.349

7.371 ± 0.446

4.382 ± 0.524

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.988 ± 0.641

5.378 ± 0.534

3.984 ± 0.573

5.378 ± 0.816

8.167 ± 1.302

5.976 ± 1.845

7.371 ± 0.117

6.574 ± 0.903

2.191 ± 0.02

5.777 ± 1.125
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski