Drosophila ananassae (Fruit fly)
Average proteome isoelectric point is 6.7
Get precalculated fractions of proteins
Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
All
Note: above files contain also dissociation constants (pKa)
Virtual 2D-PAGE plot for 19363 proteins (isoelectric point calculated using IPC2_protein)
Get csv file with sequences according to given criteria:
* You can choose from 21 different methods for calculating isoelectric point
Summary statistics related to proteome-wise predictions
Protein with the lowest isoelectric point:
>tr|B3MYL3|B3MYL3_DROAN Uncharacterized protein OS=Drosophila ananassae OX=7217 GN=Dana\GF22009 PE=4 SV=1
MM1 pKa = 7.23 IAEE4 pKa = 4.21 ALEE7 pKa = 3.93 FLFDD11 pKa = 3.87 RR12 pKa = 11.84 LPYY15 pKa = 10.24 EE16 pKa = 4.24 SEE18 pKa = 4.04 EE19 pKa = 5.04 DD20 pKa = 3.32 ICDD23 pKa = 3.64 MPEE26 pKa = 3.88 SLLVLACVLGVLIFVTYY43 pKa = 10.56 ILIRR47 pKa = 11.84 TDD49 pKa = 2.94 ADD51 pKa = 3.29 IYY53 pKa = 9.84 PLYY56 pKa = 10.39 PEE58 pKa = 4.04 VHH60 pKa = 6.99 PDD62 pKa = 3.66 DD63 pKa = 5.03 EE64 pKa = 4.54 EE65 pKa = 6.94 LIDD68 pKa = 5.06 DD69 pKa = 5.17 LARR72 pKa = 11.84 GLNQNLNNWLINGRR86 pKa = 11.84 GLAPNDD92 pKa = 3.89 RR93 pKa = 11.84 NLQQ96 pKa = 3.56
Molecular weight: 10.99 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 3.752
IPC2_protein 3.834
IPC_protein 3.77
Toseland 3.567
ProMoST 3.935
Dawson 3.757
Bjellqvist 3.923
Wikipedia 3.694
Rodwell 3.605
Grimsley 3.49
Solomon 3.745
Lehninger 3.694
Nozaki 3.884
DTASelect 4.075
Thurlkill 3.63
EMBOSS 3.706
Sillero 3.897
Patrickios 1.875
IPC_peptide 3.745
IPC2_peptide 3.872
IPC2.peptide.svr19 3.808
Protein with the highest isoelectric point:
>tr|A0A0P9C355|A0A0P9C355_DROAN Uncharacterized protein isoform B OS=Drosophila ananassae OX=7217 GN=Dana\GF10107 PE=4 SV=1
MM1 pKa = 7.2 KK2 pKa = 10.08 FVWAIVGLLFCLTLDD17 pKa = 3.97 QANGTPGEE25 pKa = 4.32 SGIKK29 pKa = 9.3 PPVWNLPTPRR39 pKa = 11.84 RR40 pKa = 11.84 TPPRR44 pKa = 11.84 PPTPVGLPIRR54 pKa = 11.84 RR55 pKa = 11.84 PPISPPRR62 pKa = 11.84 APVMWRR68 pKa = 11.84 PFPRR72 pKa = 11.84 PAPRR76 pKa = 11.84 TPPPIRR82 pKa = 11.84 RR83 pKa = 11.84 PPVTRR88 pKa = 11.84 KK89 pKa = 9.43 PPPRR93 pKa = 11.84 NPPPTRR99 pKa = 11.84 RR100 pKa = 11.84 PPITRR105 pKa = 11.84 RR106 pKa = 11.84 PTQRR110 pKa = 11.84 PAPKK114 pKa = 9.62 PLIPTTRR121 pKa = 11.84 KK122 pKa = 8.95 FLIWTRR128 pKa = 11.84 IPTRR132 pKa = 11.84 IVPTKK137 pKa = 10.05 PNIRR141 pKa = 11.84 PTLWTRR147 pKa = 11.84 RR148 pKa = 11.84 PLPTIRR154 pKa = 11.84 PTRR157 pKa = 11.84 PRR159 pKa = 11.84 IRR161 pKa = 11.84 PTLWTRR167 pKa = 11.84 PPIKK171 pKa = 9.14 ITARR175 pKa = 11.84 PRR177 pKa = 11.84 PTVRR181 pKa = 11.84 ATIRR185 pKa = 11.84 PTARR189 pKa = 11.84 PPSPTRR195 pKa = 11.84 VTKK198 pKa = 10.52 RR199 pKa = 11.84 PQKK202 pKa = 9.91 PRR204 pKa = 11.84 TGATLWTRR212 pKa = 11.84 PPGRR216 pKa = 11.84 NPTTRR221 pKa = 11.84 QLTFIFEE228 pKa = 4.61 TPQPTTQRR236 pKa = 11.84 PRR238 pKa = 11.84 PRR240 pKa = 11.84 EE241 pKa = 3.86 PPRR244 pKa = 11.84 SGSTRR249 pKa = 11.84 SLIFIFTTRR258 pKa = 11.84 RR259 pKa = 11.84 PNRR262 pKa = 11.84 TVHH265 pKa = 5.64 PTGHH269 pKa = 5.41 TRR271 pKa = 11.84 KK272 pKa = 9.97 SS273 pKa = 3.21
Molecular weight: 31.37 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 9.491
IPC2_protein 11.096
IPC_protein 12.691
Toseland 12.852
ProMoST 13.349
Dawson 12.852
Bjellqvist 12.852
Wikipedia 13.334
Rodwell 12.442
Grimsley 12.896
Solomon 13.364
Lehninger 13.261
Nozaki 12.852
DTASelect 12.852
Thurlkill 12.852
EMBOSS 13.364
Sillero 12.852
Patrickios 12.149
IPC_peptide 13.364
IPC2_peptide 12.354
IPC2.peptide.svr19 9.15
Peptides (in silico digests for buttom-up proteomics)
Below you can find
in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.
Try ESI
ChTry ESI
ArgC ESI
LysN ESI
TryLysC ESI
Try MALDI
ChTry MALDI
ArgC MALDI
LysN MALDI
TryLysC MALDI
Try LTQ
ChTry LTQ
ArgC LTQ
LysN LTQ
TryLysC LTQ
Try MSlow
ChTry MSlow
ArgC MSlow
LysN MSlow
TryLysC MSlow
Try MShigh
ChTry MShigh
ArgC MShigh
LysN MShigh
TryLysC MShigh
General Statistics
Number of major isoforms
Number of additional isoforms
Number of all proteins
Number of amino acids
Min. Seq. Length
Max. Seq. Length
Avg. Seq. Length
Avg. Mol. Weight
14231
5132
19363
12990802
21
18780
670.9
74.62
Amino acid frequency
Ala
Cys
Asp
Glu
Phe
Gly
His
Ile
Lys
Leu
7.394 ± 0.022
1.991 ± 0.067
5.257 ± 0.016
6.674 ± 0.032
3.346 ± 0.016
6.243 ± 0.026
2.57 ± 0.011
4.819 ± 0.017
5.651 ± 0.029
8.795 ± 0.038
Met
Asn
Gln
Pro
Arg
Ser
Thr
Val
Trp
Tyr
2.192 ± 0.012
4.708 ± 0.017
5.849 ± 0.038
5.27 ± 0.024
5.535 ± 0.014
8.362 ± 0.029
5.717 ± 0.02
5.857 ± 0.015
0.95 ± 0.007
2.817 ± 0.011
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level
Most of the basic statistics you can see at this page can be downloaded from this CSV file
For dipeptide frequency statistics click here