Suakwa aphid-borne yellows virus

Taxonomy: Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Sobelivirales; Solemoviridae; Polerovirus

Average proteome isoelectric point is 7.04

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 6 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|J7FDA2|J7FDA2_9LUTE Movement protein OS=Suakwa aphid-borne yellows virus OX=646010 PE=3 SV=1
MM1 pKa = 7.68KK2 pKa = 10.62NMQFVVLFFFCLSASTLCWPEE23 pKa = 3.86VEE25 pKa = 4.72PEE27 pKa = 4.15SAQALYY33 pKa = 9.89PGPTYY38 pKa = 10.82NLSYY42 pKa = 11.02DD43 pKa = 3.7GLSVLEE49 pKa = 4.95LPFHH53 pKa = 6.42TDD55 pKa = 2.09WKK57 pKa = 10.09EE58 pKa = 3.58IKK60 pKa = 10.12EE61 pKa = 4.1NFGFFCEE68 pKa = 4.56EE69 pKa = 4.19PGEE72 pKa = 4.3LDD74 pKa = 3.74LNQLIAEE81 pKa = 4.33SSYY84 pKa = 11.51TDD86 pKa = 2.99ILTSLSNKK94 pKa = 9.46ILLDD98 pKa = 3.99FKK100 pKa = 11.18SVVSVALDD108 pKa = 3.36TFLVFWALCKK118 pKa = 10.78GSIQAYY124 pKa = 9.64AFRR127 pKa = 11.84AFKK130 pKa = 10.52AWLEE134 pKa = 4.16VIITLWISVISAILSGLTWALLNIFPHH161 pKa = 5.79TLTLIFLFFFTNLLVKK177 pKa = 9.83GFRR180 pKa = 11.84ILCGTACLAFLRR192 pKa = 11.84MLFSPLLPVKK202 pKa = 10.54RR203 pKa = 11.84ILTWTLARR211 pKa = 11.84LLGNSFGRR219 pKa = 11.84KK220 pKa = 8.65LEE222 pKa = 4.11KK223 pKa = 9.99ATEE226 pKa = 4.01GWKK229 pKa = 10.61SFEE232 pKa = 4.35IKK234 pKa = 9.22MAPPSSSALPVRR246 pKa = 11.84NRR248 pKa = 11.84ITKK251 pKa = 8.99EE252 pKa = 3.38HH253 pKa = 6.61AGYY256 pKa = 10.49CGFVQTHH263 pKa = 5.9MKK265 pKa = 10.1NADD268 pKa = 3.23GTYY271 pKa = 9.78VEE273 pKa = 4.89AFITARR279 pKa = 11.84HH280 pKa = 6.03VIDD283 pKa = 5.74DD284 pKa = 4.36DD285 pKa = 4.02LGEE288 pKa = 4.04IHH290 pKa = 7.15SPKK293 pKa = 9.44TKK295 pKa = 10.85NFIACADD302 pKa = 4.07LEE304 pKa = 4.41VLGDD308 pKa = 3.69WEE310 pKa = 5.03SIDD313 pKa = 5.9LILLRR318 pKa = 11.84APKK321 pKa = 9.79HH322 pKa = 4.88ARR324 pKa = 11.84SYY326 pKa = 10.63LGCKK330 pKa = 8.13PASMVAIDD338 pKa = 5.47RR339 pKa = 11.84LATCDD344 pKa = 3.25ASTFHH349 pKa = 7.27LIDD352 pKa = 4.75GEE354 pKa = 4.27WHH356 pKa = 5.96MSNARR361 pKa = 11.84LVGDD365 pKa = 4.0VKK367 pKa = 11.26NGVAVLSNSVCGHH380 pKa = 6.13SGSPFYY386 pKa = 10.59NGKK389 pKa = 9.8HH390 pKa = 5.36ILGVLYY396 pKa = 10.86GGGSYY401 pKa = 10.73FEE403 pKa = 5.09NFNVMNPIPAIPGLTTPEE421 pKa = 3.74RR422 pKa = 11.84RR423 pKa = 11.84LEE425 pKa = 4.08TTAPRR430 pKa = 11.84GKK432 pKa = 10.02IFNNEE437 pKa = 3.67DD438 pKa = 3.22FFQKK442 pKa = 10.79LEE444 pKa = 4.01EE445 pKa = 5.07EE446 pKa = 4.36YY447 pKa = 11.17LQMKK451 pKa = 9.03NFKK454 pKa = 10.58SKK456 pKa = 9.56TGVDD460 pKa = 3.43WADD463 pKa = 3.69LPSDD467 pKa = 4.92DD468 pKa = 5.86EE469 pKa = 4.77MDD471 pKa = 4.01FQDD474 pKa = 4.53ALPSFRR480 pKa = 11.84KK481 pKa = 9.84AEE483 pKa = 4.09KK484 pKa = 10.43AEE486 pKa = 4.2PSHH489 pKa = 6.61PVANTRR495 pKa = 11.84EE496 pKa = 4.08PAVVVGDD503 pKa = 3.63IRR505 pKa = 11.84CNISGNRR512 pKa = 11.84RR513 pKa = 11.84EE514 pKa = 4.12QGRR517 pKa = 11.84LLQQRR522 pKa = 11.84PHH524 pKa = 5.64VRR526 pKa = 11.84CCEE529 pKa = 4.03EE530 pKa = 3.87PRR532 pKa = 11.84EE533 pKa = 4.31SCGPDD538 pKa = 2.98GGQCGHH544 pKa = 7.37PGDD547 pKa = 4.09PTRR550 pKa = 11.84GSSDD554 pKa = 3.37SCCPALRR561 pKa = 11.84QPEE564 pKa = 4.19KK565 pKa = 10.91DD566 pKa = 3.28EE567 pKa = 4.42SRR569 pKa = 11.84TVPAWEE575 pKa = 4.23SRR577 pKa = 11.84GTEE580 pKa = 3.29ADD582 pKa = 2.76NFRR585 pKa = 11.84RR586 pKa = 11.84YY587 pKa = 8.43FQNEE591 pKa = 3.81YY592 pKa = 9.83DD593 pKa = 3.58WEE595 pKa = 4.38VRR597 pKa = 11.84APAPQVPGFRR607 pKa = 11.84HH608 pKa = 6.55CGTLPRR614 pKa = 11.84YY615 pKa = 9.32YY616 pKa = 10.67FSRR619 pKa = 11.84QKK621 pKa = 11.4GEE623 pKa = 4.26TEE625 pKa = 3.39WGKK628 pKa = 7.87TLTRR632 pKa = 11.84DD633 pKa = 3.51NPSLGEE639 pKa = 3.88ATAGYY644 pKa = 8.93GWPEE648 pKa = 4.22FGPGAEE654 pKa = 4.26LKK656 pKa = 10.47SLKK659 pKa = 10.2LQAARR664 pKa = 11.84WRR666 pKa = 11.84EE667 pKa = 3.81RR668 pKa = 11.84ASSAKK673 pKa = 9.91VPYY676 pKa = 8.82PSEE679 pKa = 4.07RR680 pKa = 11.84EE681 pKa = 3.76RR682 pKa = 11.84VIRR685 pKa = 11.84IATEE689 pKa = 4.12RR690 pKa = 11.84YY691 pKa = 9.28SKK693 pKa = 10.77VKK695 pKa = 10.42SVAPACSRR703 pKa = 11.84SGEE706 pKa = 4.28LKK708 pKa = 10.16WEE710 pKa = 4.15GLVEE714 pKa = 4.21DD715 pKa = 5.59LKK717 pKa = 11.53DD718 pKa = 3.96CLPSLSLEE726 pKa = 4.37AGVGVPYY733 pKa = 10.23IAYY736 pKa = 9.16GRR738 pKa = 11.84PTLGSWVNDD747 pKa = 3.36QALLPILSRR756 pKa = 11.84LVFDD760 pKa = 4.62RR761 pKa = 11.84LKK763 pKa = 11.13KK764 pKa = 9.41MSEE767 pKa = 3.83TRR769 pKa = 11.84FDD771 pKa = 4.17DD772 pKa = 3.59MTPEE776 pKa = 3.95EE777 pKa = 4.43LVQNGLCDD785 pKa = 4.91PIRR788 pKa = 11.84TFIKK792 pKa = 10.71GEE794 pKa = 3.74PHH796 pKa = 6.74KK797 pKa = 10.88SSKK800 pKa = 10.55LKK802 pKa = 9.58EE803 pKa = 3.75GRR805 pKa = 11.84YY806 pKa = 9.15RR807 pKa = 11.84LIMSVSIVDD816 pKa = 3.48QLVARR821 pKa = 11.84VLFQNQNKK829 pKa = 10.05SEE831 pKa = 4.05IALWRR836 pKa = 11.84AIPSKK841 pKa = 10.48PGLGLSTDD849 pKa = 3.62EE850 pKa = 3.99QVLDD854 pKa = 4.63FVHH857 pKa = 6.47NLAEE861 pKa = 3.99NTEE864 pKa = 4.11YY865 pKa = 10.84RR866 pKa = 11.84EE867 pKa = 4.15SVEE870 pKa = 5.28DD871 pKa = 5.81FIKK874 pKa = 9.87HH875 pKa = 3.86WHH877 pKa = 5.55RR878 pKa = 11.84TVVPTDD884 pKa = 3.24CSGFDD889 pKa = 3.34WSVSSWMLEE898 pKa = 3.48DD899 pKa = 4.98DD900 pKa = 3.64MEE902 pKa = 4.34VRR904 pKa = 11.84NNLTINNNEE913 pKa = 3.64LTRR916 pKa = 11.84RR917 pKa = 11.84LRR919 pKa = 11.84ACWLKK924 pKa = 10.87CISNSVICLSDD935 pKa = 3.39GTLLAQEE942 pKa = 4.58FPGIQKK948 pKa = 10.23SGSYY952 pKa = 8.29NTSSTNSRR960 pKa = 11.84VRR962 pKa = 11.84VMLSIYY968 pKa = 10.65AGASWAIAMGDD979 pKa = 3.83DD980 pKa = 3.85ALEE983 pKa = 4.36SADD986 pKa = 4.21TIIPLYY992 pKa = 9.06EE993 pKa = 3.85QYY995 pKa = 11.12GLKK998 pKa = 10.38VEE1000 pKa = 4.48VSDD1003 pKa = 3.87KK1004 pKa = 11.67LEE1006 pKa = 4.38FCSHH1010 pKa = 5.84EE1011 pKa = 4.46FKK1013 pKa = 10.94SSSLAIPTNIGKK1025 pKa = 8.31MLYY1028 pKa = 10.21KK1029 pKa = 10.39LIHH1032 pKa = 6.61GYY1034 pKa = 10.48EE1035 pKa = 4.06IFPGMSSIQVTINYY1049 pKa = 7.63LTACYY1054 pKa = 10.21SVLNEE1059 pKa = 4.0LRR1061 pKa = 11.84HH1062 pKa = 5.29VPEE1065 pKa = 4.4AASLVAQCLAPVEE1078 pKa = 4.18AQKK1081 pKa = 11.17VV1082 pKa = 3.51

Molecular weight: 121.37 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|J7FE76|J7FE76_9LUTE p3 OS=Suakwa aphid-borne yellows virus OX=646010 PE=4 SV=1
MM1 pKa = 6.53NTVVVRR7 pKa = 11.84NRR9 pKa = 11.84NGMGRR14 pKa = 11.84RR15 pKa = 11.84RR16 pKa = 11.84RR17 pKa = 11.84NSRR20 pKa = 11.84RR21 pKa = 11.84NAKK24 pKa = 9.19GNRR27 pKa = 11.84VVVVQAPGAPQRR39 pKa = 11.84GRR41 pKa = 11.84RR42 pKa = 11.84RR43 pKa = 11.84RR44 pKa = 11.84RR45 pKa = 11.84NGRR48 pKa = 11.84RR49 pKa = 11.84PSRR52 pKa = 11.84GGRR55 pKa = 11.84ARR57 pKa = 11.84GTSQGEE63 pKa = 4.12TFVFSKK69 pKa = 11.24DD70 pKa = 3.3NLTGSSSGAITFGPSLSDD88 pKa = 3.25SPAFSSGILKK98 pKa = 10.26AYY100 pKa = 10.18HH101 pKa = 6.62EE102 pKa = 4.74YY103 pKa = 10.05KK104 pKa = 10.27ISMVKK109 pKa = 10.66LEE111 pKa = 5.07FISEE115 pKa = 4.18ASSTSSGSISYY126 pKa = 10.24EE127 pKa = 3.75LDD129 pKa = 3.23PHH131 pKa = 6.86CKK133 pKa = 10.08LSSLQSTVNKK143 pKa = 10.33FGITKK148 pKa = 10.09SGSRR152 pKa = 11.84TWSAKK157 pKa = 9.97FINGMEE163 pKa = 3.99WHH165 pKa = 7.45DD166 pKa = 3.56ATEE169 pKa = 4.04DD170 pKa = 3.41QFRR173 pKa = 11.84ILYY176 pKa = 9.14KK177 pKa = 11.03GNGSSSTAGSFRR189 pKa = 11.84ITIRR193 pKa = 11.84CQVQNPKK200 pKa = 10.62

Molecular weight: 22.03 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

6

0

6

3062

192

1082

510.3

56.94

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.218 ± 0.499

2.025 ± 0.393

4.605 ± 0.242

6.434 ± 0.392

4.474 ± 0.582

7.185 ± 0.679

2.057 ± 0.094

4.931 ± 0.203

4.899 ± 0.415

9.014 ± 1.251

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.731 ± 0.1

4.442 ± 0.227

5.944 ± 0.414

3.135 ± 0.328

6.793 ± 0.72

9.242 ± 0.936

5.519 ± 0.272

5.487 ± 0.307

1.992 ± 0.157

2.841 ± 0.194
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski