Armigeres subalbatus virus SaX06-AK20
Average proteome isoelectric point is 7.21
Get precalculated fractions of proteins
Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
All
Note: above files contain also dissociation constants (pKa)
Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)
Get csv file with sequences according to given criteria:
* You can choose from 21 different methods for calculating isoelectric point
Summary statistics related to proteome-wise predictions
Protein with the lowest isoelectric point:
>tr|D2CSN2|D2CSN2_9VIRU RNA-directed RNA polymerase OS=Armigeres subalbatus virus SaX06-AK20 OX=556524 PE=3 SV=1
MM1 pKa = 7.32 EE2 pKa = 4.49 RR3 pKa = 11.84 HH4 pKa = 6.29 HH5 pKa = 7.03 NSNAQNEE12 pKa = 4.59 YY13 pKa = 9.76 PNEE16 pKa = 4.04 ILSSAVQPNNNVSWNYY32 pKa = 10.56 HH33 pKa = 5.97 KK34 pKa = 10.3 IDD36 pKa = 3.85 GASAPLYY43 pKa = 6.83 PQPNGAEE50 pKa = 4.12 TPDD53 pKa = 3.37 RR54 pKa = 11.84 LKK56 pKa = 11.02 VLRR59 pKa = 11.84 KK60 pKa = 10.0 YY61 pKa = 8.71 FTLSNVVLGAKK72 pKa = 9.92 IIIIGGVAFAGYY84 pKa = 9.62 KK85 pKa = 8.75 VAHH88 pKa = 6.51 GMYY91 pKa = 8.38 TWYY94 pKa = 10.16 EE95 pKa = 4.27 AISSPIAALEE105 pKa = 4.39 TTVSTEE111 pKa = 3.6 YY112 pKa = 8.91 HH113 pKa = 5.66 TLQTKK118 pKa = 10.1 YY119 pKa = 10.41 GYY121 pKa = 8.86 QWYY124 pKa = 9.52 DD125 pKa = 3.24 YY126 pKa = 10.1 FCPKK130 pKa = 10.28 CMLYY134 pKa = 10.55 KK135 pKa = 10.54 FATHH139 pKa = 6.61 SGNATTAASHH149 pKa = 6.69 HH150 pKa = 5.08 NHH152 pKa = 5.97 IMHH155 pKa = 7.51 ALNGNGEE162 pKa = 4.44 QIHH165 pKa = 6.32 VIQIGNQIEE174 pKa = 4.46 LTNTIAAMKK183 pKa = 9.96 FNVKK187 pKa = 9.59 LRR189 pKa = 11.84 SKK191 pKa = 10.72 NKK193 pKa = 9.99 VIVEE197 pKa = 4.17 LVPLTAPSGDD207 pKa = 2.93 MATRR211 pKa = 11.84 NKK213 pKa = 8.7 TRR215 pKa = 11.84 HH216 pKa = 5.68 DD217 pKa = 3.8 QNNAIAILNQIASQGNDD234 pKa = 2.69 KK235 pKa = 10.67 RR236 pKa = 11.84 LPLYY240 pKa = 10.65 HH241 pKa = 7.2 SFIKK245 pKa = 9.93 TGSDD249 pKa = 3.02 DD250 pKa = 3.48 RR251 pKa = 11.84 PRR253 pKa = 11.84 FDD255 pKa = 3.17 VSMVFKK261 pKa = 10.76 NVTYY265 pKa = 10.67 VGLGGATKK273 pKa = 10.16 HH274 pKa = 5.7 AAKK277 pKa = 9.83 TKK279 pKa = 9.77 AASAALIALHH289 pKa = 6.45 TSPEE293 pKa = 4.2 LNGDD297 pKa = 3.31 QRR299 pKa = 11.84 ATLSAWTRR307 pKa = 11.84 DD308 pKa = 3.42 LTKK311 pKa = 11.07 DD312 pKa = 3.2 GDD314 pKa = 4.02 VEE316 pKa = 5.04 SNPGPRR322 pKa = 11.84 GLDD325 pKa = 3.11 LDD327 pKa = 4.13 FSYY330 pKa = 10.97 PNEE333 pKa = 4.02 EE334 pKa = 4.43 TPPDD338 pKa = 3.47 MSNFVPYY345 pKa = 10.05 TSYY348 pKa = 9.71 STHH351 pKa = 6.41 TNLKK355 pKa = 9.41 PFNDD359 pKa = 3.51 VEE361 pKa = 4.23 NYY363 pKa = 10.53 DD364 pKa = 3.64 RR365 pKa = 11.84 DD366 pKa = 3.78 SAFAEE371 pKa = 4.66 DD372 pKa = 4.35 YY373 pKa = 11.26 VADD376 pKa = 4.3 EE377 pKa = 4.62 YY378 pKa = 11.25 KK379 pKa = 10.71 AHH381 pKa = 6.28 LAKK384 pKa = 10.35 RR385 pKa = 11.84 VEE387 pKa = 4.23 YY388 pKa = 10.72 EE389 pKa = 4.02 NATGNYY395 pKa = 8.86 FNYY398 pKa = 10.38 LSSLLNLPTSNRR410 pKa = 11.84 FALLCVDD417 pKa = 5.08 DD418 pKa = 5.67 VDD420 pKa = 5.85 PEE422 pKa = 4.38 PCDD425 pKa = 5.15 DD426 pKa = 3.86 EE427 pKa = 5.44 TEE429 pKa = 4.15 TSTPEE434 pKa = 3.89 KK435 pKa = 10.31 QKK437 pKa = 10.41 PRR439 pKa = 11.84 PPKK442 pKa = 8.74 VARR445 pKa = 11.84 EE446 pKa = 3.8 RR447 pKa = 11.84 KK448 pKa = 8.83 EE449 pKa = 3.78 RR450 pKa = 11.84 PFVEE454 pKa = 4.29 KK455 pKa = 10.06 PVPVKK460 pKa = 10.61 KK461 pKa = 10.0 IEE463 pKa = 3.99 KK464 pKa = 9.23 TEE466 pKa = 4.05 EE467 pKa = 3.77 EE468 pKa = 4.5 KK469 pKa = 10.14 KK470 pKa = 8.12 TDD472 pKa = 3.35 RR473 pKa = 11.84 MFALKK478 pKa = 10.3 RR479 pKa = 11.84 IAGQLKK485 pKa = 7.58 QTPEE489 pKa = 4.03 KK490 pKa = 10.54 VFLWVKK496 pKa = 10.52 RR497 pKa = 11.84 KK498 pKa = 8.32 MSPVFKK504 pKa = 9.15 TTILDD509 pKa = 3.84 LVFGLNWQEE518 pKa = 3.64 KK519 pKa = 9.07 TIMNQYY525 pKa = 9.64 EE526 pKa = 3.76 FAAYY530 pKa = 10.44 ANLHH534 pKa = 6.99 DD535 pKa = 4.14 ITDD538 pKa = 4.33 DD539 pKa = 3.69 EE540 pKa = 5.62 LISTVINHH548 pKa = 5.13 DD549 pKa = 4.14 TKK551 pKa = 9.6 WASYY555 pKa = 10.76 SLQQKK560 pKa = 7.82 ITLAKK565 pKa = 9.23 EE566 pKa = 3.94 LNFSYY571 pKa = 11.17 VEE573 pKa = 4.13 AKK575 pKa = 10.42 SLSHH579 pKa = 6.01 NKK581 pKa = 9.22 EE582 pKa = 3.62 MHH584 pKa = 5.9 SANGNILSNTLSDD597 pKa = 4.27 VEE599 pKa = 4.39 EE600 pKa = 4.32 HH601 pKa = 7.51 DD602 pKa = 3.49 KK603 pKa = 11.24 AQNIVKK609 pKa = 9.88 YY610 pKa = 10.21 NQATLPQYY618 pKa = 10.55 RR619 pKa = 11.84 GIEE622 pKa = 3.92 AQVYY626 pKa = 6.38 ITNVAGDD633 pKa = 3.86 TNPNFTRR640 pKa = 11.84 IFDD643 pKa = 3.51 QDD645 pKa = 3.92 RR646 pKa = 11.84 IRR648 pKa = 11.84 GNVVGAANNITNNCAVPLPMTCLIPRR674 pKa = 11.84 QVRR677 pKa = 11.84 PLVPGALVPALQRR690 pKa = 11.84 LRR692 pKa = 11.84 ITEE695 pKa = 4.44 LNTAEE700 pKa = 4.64 YY701 pKa = 9.91 YY702 pKa = 10.79 LNPIIATDD710 pKa = 4.31 LSKK713 pKa = 10.62 MISDD717 pKa = 3.35 QVKK720 pKa = 10.34 NNQSSNWRR728 pKa = 11.84 RR729 pKa = 11.84 DD730 pKa = 3.59 NNSLSGFSTFDD741 pKa = 2.79 IATINTALLPKK752 pKa = 10.4 GLTLEE757 pKa = 4.3 SMLLKK762 pKa = 10.24 PDD764 pKa = 4.07 LLHH767 pKa = 7.21 SITSLRR773 pKa = 11.84 TNFTSINRR781 pKa = 11.84 STFNAIDD788 pKa = 3.84 NNTVPSVGVSVTIGINNSPVFGEE811 pKa = 4.27 DD812 pKa = 2.81 CGGNNPVFPWLGNKK826 pKa = 9.88 GSVAFHH832 pKa = 6.34 LTLASVPIDD841 pKa = 3.56 QRR843 pKa = 11.84 DD844 pKa = 3.67 DD845 pKa = 4.69 AIVMPPGLLQASYY858 pKa = 10.76 DD859 pKa = 3.62 ASEE862 pKa = 4.08 AVAMFVMSWAEE873 pKa = 3.93 WPFGIYY879 pKa = 8.73 TATRR883 pKa = 11.84 PTTDD887 pKa = 2.75 TAGGNNQNQVFVPTQSLTRR906 pKa = 11.84 VAGRR910 pKa = 11.84 RR911 pKa = 11.84 TLNIVLPKK919 pKa = 10.1 RR920 pKa = 11.84 FAEE923 pKa = 4.38 AAPTSGPQANAQATLRR939 pKa = 11.84 PTAGPVAAAGAPPILAGQVLDD960 pKa = 3.58 INFVGGALIAYY971 pKa = 7.41 PLTDD975 pKa = 4.29 YY976 pKa = 11.09 LYY978 pKa = 9.16 TWATQFDD985 pKa = 4.2 ATPIRR990 pKa = 11.84 QYY992 pKa = 10.53 IGRR995 pKa = 11.84 LGVLMGVKK1003 pKa = 9.18 DD1004 pKa = 3.97 TLLVAHH1010 pKa = 7.07 EE1011 pKa = 4.35 MNIALCQQYY1020 pKa = 10.52 PKK1022 pKa = 9.76 MVTGAGGVASPAPNSIPQFDD1042 pKa = 4.2 LCYY1045 pKa = 10.49 CNHH1048 pKa = 5.74 TQVTTSVANFPLAADD1063 pKa = 3.32 VRR1065 pKa = 11.84 ADD1067 pKa = 3.43 YY1068 pKa = 10.82 RR1069 pKa = 11.84 IFEE1072 pKa = 4.6 TNPATWNKK1080 pKa = 9.56 VCLGLATAPNLTPDD1094 pKa = 3.83 EE1095 pKa = 4.53 PVDD1098 pKa = 3.68 IPYY1101 pKa = 10.57 HH1102 pKa = 6.27 LGNPSNAFWEE1112 pKa = 4.37 RR1113 pKa = 11.84 LEE1115 pKa = 4.24 SVPMAASWALYY1126 pKa = 9.76 YY1127 pKa = 10.58 NLRR1130 pKa = 11.84 GLTTLAWNNAYY1141 pKa = 9.42 TNANSVWAQRR1151 pKa = 11.84 MARR1154 pKa = 11.84 EE1155 pKa = 4.52 TFCTTHH1161 pKa = 4.37 VTGTIVPARR1170 pKa = 11.84 YY1171 pKa = 9.55 GRR1173 pKa = 11.84 IPHH1176 pKa = 7.32 DD1177 pKa = 3.29 IMKK1180 pKa = 9.96 SVYY1183 pKa = 9.86 GRR1185 pKa = 11.84 APKK1188 pKa = 8.12 TTQTSKK1194 pKa = 11.02 GGTLIDD1200 pKa = 3.29 ISHH1203 pKa = 6.87 FEE1205 pKa = 3.83 RR1206 pKa = 11.84 WLPGAPFASVYY1217 pKa = 8.8 TAAGVEE1223 pKa = 4.5 VTGLTPTILADD1234 pKa = 3.06 IWIQYY1239 pKa = 8.45 PADD1242 pKa = 3.93 NLPILAATFPPPFHH1256 pKa = 7.22 RR1257 pKa = 11.84 DD1258 pKa = 3.03 SVQGFDD1264 pKa = 4.07 SRR1266 pKa = 11.84 NGLAIHH1272 pKa = 7.05 RR1273 pKa = 11.84 NMNNDD1278 pKa = 3.04 LVSPYY1283 pKa = 9.59 MEE1285 pKa = 5.47 PDD1287 pKa = 2.92 PRR1289 pKa = 11.84 AFFDD1293 pKa = 3.93 VNKK1296 pKa = 9.97 GPVMNDD1302 pKa = 2.92 FAVWNSRR1309 pKa = 11.84 LWFTHH1314 pKa = 6.0 PNRR1317 pKa = 11.84 QILDD1321 pKa = 3.62 YY1322 pKa = 10.87 SGGAIAEE1329 pKa = 4.45 VIPAAGTYY1337 pKa = 9.49 PLGRR1341 pKa = 11.84 GIPLLTGEE1349 pKa = 4.5 NVPPEE1354 pKa = 4.18 LANASTICIPRR1365 pKa = 11.84 FSNAGQRR1372 pKa = 11.84 IFLYY1376 pKa = 8.81 VTQAQSVQLVGACNRR1391 pKa = 11.84 SNRR1394 pKa = 11.84 LMRR1397 pKa = 11.84 SAWLLNDD1404 pKa = 3.39 VYY1406 pKa = 10.81 KK1407 pKa = 11.11 APDD1410 pKa = 3.39 VQQWGRR1416 pKa = 11.84 DD1417 pKa = 3.57 EE1418 pKa = 4.92 EE1419 pKa = 5.54 DD1420 pKa = 3.42 EE1421 pKa = 4.68 FDD1423 pKa = 4.75 TITKK1427 pKa = 10.24 SYY1429 pKa = 10.34 FLDD1432 pKa = 3.52 VTTAGVDD1439 pKa = 3.06 NATNQIPATLVNTNEE1454 pKa = 3.92 QAVDD1458 pKa = 3.65 VSQLPSSANPSTTMEE1473 pKa = 4.17 QPTSVAII1480 pKa = 3.92
Molecular weight: 163.55 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 5.899
IPC2_protein 5.868
IPC_protein 5.944
Toseland 6.364
ProMoST 6.326
Dawson 6.237
Bjellqvist 6.237
Wikipedia 6.262
Rodwell 6.224
Grimsley 6.532
Solomon 6.237
Lehninger 6.237
Nozaki 6.517
DTASelect 6.707
Thurlkill 6.722
EMBOSS 6.693
Sillero 6.62
Patrickios 4.05
IPC_peptide 6.262
IPC2_peptide 6.576
IPC2.peptide.svr19 6.555
Protein with the highest isoelectric point:
>tr|D2CSN2|D2CSN2_9VIRU RNA-directed RNA polymerase OS=Armigeres subalbatus virus SaX06-AK20 OX=556524 PE=3 SV=1
MM1 pKa = 7.74 KK2 pKa = 10.32 DD3 pKa = 3.01 ILCVVSQEE11 pKa = 4.49 LKK13 pKa = 11.19 EE14 pKa = 3.96 EE15 pKa = 4.0 MKK17 pKa = 10.88 YY18 pKa = 10.02 YY19 pKa = 10.57 QHH21 pKa = 7.36 LDD23 pKa = 3.34 NILFTNIMIYY33 pKa = 10.05 GHH35 pKa = 6.0 IHH37 pKa = 5.75 GPSTIRR43 pKa = 11.84 EE44 pKa = 4.05 LRR46 pKa = 11.84 EE47 pKa = 3.42 LGMFNDD53 pKa = 4.58 FEE55 pKa = 4.95 TFVTMAGKK63 pKa = 10.24 ISGHH67 pKa = 5.34 FKK69 pKa = 10.52 RR70 pKa = 11.84 YY71 pKa = 8.73 PICKK75 pKa = 10.02 DD76 pKa = 2.91 EE77 pKa = 4.23 TKK79 pKa = 10.59 QRR81 pKa = 11.84 LCEE84 pKa = 4.05 IQCLTGYY91 pKa = 9.4 LQNDD95 pKa = 3.58 PPGWDD100 pKa = 3.5 FEE102 pKa = 4.64 KK103 pKa = 10.92 EE104 pKa = 4.22 FVSLAEE110 pKa = 4.19 GGYY113 pKa = 8.66 EE114 pKa = 3.77 HH115 pKa = 7.23 GLVGEE120 pKa = 4.42 DD121 pKa = 2.74 WPARR125 pKa = 11.84 FKK127 pKa = 10.9 EE128 pKa = 4.16 LNDD131 pKa = 3.44 KK132 pKa = 10.96 VMTRR136 pKa = 11.84 QPMPDD141 pKa = 4.0 FISFEE146 pKa = 4.05 DD147 pKa = 4.99 FIRR150 pKa = 11.84 DD151 pKa = 3.97 GLWITAGSSSIGKK164 pKa = 8.54 VEE166 pKa = 3.79 WTKK169 pKa = 10.97 TDD171 pKa = 3.42 DD172 pKa = 3.4 KK173 pKa = 11.79 GKK175 pKa = 10.58 FKK177 pKa = 10.89 ARR179 pKa = 11.84 KK180 pKa = 9.2 NMLTEE185 pKa = 5.09 LYY187 pKa = 9.68 TDD189 pKa = 3.57 EE190 pKa = 5.18 DD191 pKa = 4.32 LIEE194 pKa = 5.11 IVNNWDD200 pKa = 3.53 GILRR204 pKa = 11.84 SRR206 pKa = 11.84 VFTKK210 pKa = 10.85 DD211 pKa = 3.02 EE212 pKa = 3.96 LSKK215 pKa = 10.93 RR216 pKa = 11.84 RR217 pKa = 11.84 LAVASNIEE225 pKa = 4.28 AYY227 pKa = 10.6 LSEE230 pKa = 4.02 AWILHH235 pKa = 5.57 LFGHH239 pKa = 6.18 GFKK242 pKa = 10.4 NYY244 pKa = 10.07 EE245 pKa = 4.36 YY246 pKa = 9.05 ITLDD250 pKa = 3.46 EE251 pKa = 4.39 SPKK254 pKa = 9.52 RR255 pKa = 11.84 QHH257 pKa = 6.07 EE258 pKa = 4.33 RR259 pKa = 11.84 TSKK262 pKa = 10.86 LINLLRR268 pKa = 11.84 NGSFCLPFDD277 pKa = 4.29 FKK279 pKa = 11.48 GFDD282 pKa = 3.36 HH283 pKa = 6.44 QPQIKK288 pKa = 10.74 AEE290 pKa = 4.1 VQVILQKK297 pKa = 10.52 IVDD300 pKa = 3.84 HH301 pKa = 6.42 VRR303 pKa = 11.84 TKK305 pKa = 10.66 VPKK308 pKa = 10.48 DD309 pKa = 3.13 KK310 pKa = 11.0 LATFNSIAVRR320 pKa = 11.84 MVEE323 pKa = 4.37 SYY325 pKa = 11.65 AKK327 pKa = 10.82 GEE329 pKa = 4.44 IINPMTMEE337 pKa = 3.92 VLIQIGGIPSGVRR350 pKa = 11.84 PTSLIGNVWNGDD362 pKa = 3.07 MTTYY366 pKa = 10.88 ARR368 pKa = 11.84 EE369 pKa = 4.08 LTKK372 pKa = 11.23 LMMRR376 pKa = 11.84 RR377 pKa = 11.84 DD378 pKa = 4.11 EE379 pKa = 4.22 IEE381 pKa = 4.18 EE382 pKa = 3.95 IGIKK386 pKa = 10.64 GDD388 pKa = 3.41 DD389 pKa = 3.49 TYY391 pKa = 11.08 IASKK395 pKa = 11.04 NPVALIIFRR404 pKa = 11.84 LAYY407 pKa = 10.17 AAVNAIGLDD416 pKa = 3.67 SKK418 pKa = 11.24 FGISQNICEE427 pKa = 4.41 FLRR430 pKa = 11.84 NEE432 pKa = 3.89 ISINGCQGWSNRR444 pKa = 11.84 AIPSLSQRR452 pKa = 11.84 KK453 pKa = 7.86 PWNAQPWSPSSEE465 pKa = 4.13 VATVANNIYY474 pKa = 10.49 LLEE477 pKa = 4.48 RR478 pKa = 11.84 RR479 pKa = 11.84 LKK481 pKa = 10.42 RR482 pKa = 11.84 STPQLHH488 pKa = 5.6 QANKK492 pKa = 9.83 IKK494 pKa = 9.74 WSKK497 pKa = 8.93 YY498 pKa = 6.6 TNQSYY503 pKa = 9.59 HH504 pKa = 6.26 WLHH507 pKa = 6.33 LPVRR511 pKa = 11.84 LGGFGLYY518 pKa = 9.73 PFEE521 pKa = 4.08 GWEE524 pKa = 4.17 PNGKK528 pKa = 9.56 LPLVAKK534 pKa = 9.74 PFITVNNLKK543 pKa = 10.03 ISRR546 pKa = 11.84 EE547 pKa = 3.94 YY548 pKa = 10.91 VPWAKK553 pKa = 9.02 LTPEE557 pKa = 3.91 QNILYY562 pKa = 9.78 AQEE565 pKa = 4.6 DD566 pKa = 4.68 FNSKK570 pKa = 9.72 IATDD574 pKa = 5.33 DD575 pKa = 3.2 IPGPQKK581 pKa = 10.43 YY582 pKa = 9.5 YY583 pKa = 11.04 SRR585 pKa = 11.84 DD586 pKa = 3.07 FVNILRR592 pKa = 11.84 TKK594 pKa = 8.08 TFSWTKK600 pKa = 8.55 EE601 pKa = 3.61 PTIIRR606 pKa = 11.84 IFPPKK611 pKa = 9.17 VQRR614 pKa = 11.84 PPVAEE619 pKa = 4.17 HH620 pKa = 5.58 VWWPRR625 pKa = 11.84 DD626 pKa = 2.95 RR627 pKa = 11.84 FVNQKK632 pKa = 10.36 SLDD635 pKa = 3.41 PTMPIFAEE643 pKa = 5.7 FIRR646 pKa = 11.84 QHH648 pKa = 4.52 QTLKK652 pKa = 10.36 RR653 pKa = 11.84 ASGRR657 pKa = 11.84 MNIKK661 pKa = 10.01 VEE663 pKa = 4.13 PLPALAKK670 pKa = 9.85 KK671 pKa = 9.22 WYY673 pKa = 7.31 PHH675 pKa = 5.99 LWSSVEE681 pKa = 3.87 YY682 pKa = 10.59 FEE684 pKa = 6.16 ANGWHH689 pKa = 5.96 RR690 pKa = 11.84 TDD692 pKa = 5.45 AINLAIGNIPTEE704 pKa = 4.13 PTKK707 pKa = 10.41 ILHH710 pKa = 6.63 PSLTAFVKK718 pKa = 10.77 EE719 pKa = 4.2 SVKK722 pKa = 10.76 RR723 pKa = 11.84 NNFRR727 pKa = 11.84 YY728 pKa = 8.7 WKK730 pKa = 9.53 GRR732 pKa = 11.84 RR733 pKa = 11.84 NIALNLYY740 pKa = 8.55 TITTLAVHH748 pKa = 7.23 EE749 pKa = 4.25 IQATGGKK756 pKa = 8.95 HH757 pKa = 5.74 LYY759 pKa = 10.35 AYY761 pKa = 10.23
Molecular weight: 87.97 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 8.525
IPC2_protein 8.448
IPC_protein 8.331
Toseland 9.004
ProMoST 8.902
Dawson 9.326
Bjellqvist 9.121
Wikipedia 9.487
Rodwell 9.545
Grimsley 9.385
Solomon 9.37
Lehninger 9.326
Nozaki 9.209
DTASelect 9.063
Thurlkill 9.194
EMBOSS 9.472
Sillero 9.326
Patrickios 4.724
IPC_peptide 9.355
IPC2_peptide 7.717
IPC2.peptide.svr19 7.659
Peptides (in silico digests for buttom-up proteomics)
Below you can find
in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.
Try ESI
ChTry ESI
ArgC ESI
LysN ESI
TryLysC ESI
Try MALDI
ChTry MALDI
ArgC MALDI
LysN MALDI
TryLysC MALDI
Try LTQ
ChTry LTQ
ArgC LTQ
LysN LTQ
TryLysC LTQ
Try MSlow
ChTry MSlow
ArgC MSlow
LysN MSlow
TryLysC MSlow
Try MShigh
ChTry MShigh
ArgC MShigh
LysN MShigh
TryLysC MShigh
General Statistics
Number of major isoforms
Number of additional isoforms
Number of all proteins
Number of amino acids
Min. Seq. Length
Max. Seq. Length
Avg. Seq. Length
Avg. Mol. Weight
2
0
2
2241
761
1480
1120.5
125.76
Amino acid frequency
Ala
Cys
Asp
Glu
Phe
Gly
His
Ile
Lys
Leu
8.255 ± 1.52
0.937 ± 0.01
4.953 ± 0.27
5.132 ± 0.872
4.016 ± 0.397
5.578 ± 0.113
2.365 ± 0.146
6.381 ± 1.054
5.266 ± 1.162
8.166 ± 0.135
Met
Asn
Gln
Pro
Arg
Ser
Thr
Val
Trp
Tyr
2.008 ± 0.052
6.917 ± 0.776
6.426 ± 0.431
3.748 ± 0.111
4.909 ± 0.485
5.846 ± 0.181
7.274 ± 0.901
6.113 ± 0.622
1.963 ± 0.442
3.748 ± 0.038
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level
Most of the basic statistics you can see at this page can be downloaded from this CSV file
For dipeptide frequency statistics click here