Mycoplasma genitalium (strain ATCC 33530 / G-37 / NCTC 10195)
Average proteome isoelectric point is 7.94
Get precalculated fractions of proteins
Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
All
Note: above files contain also dissociation constants (pKa)
Virtual 2D-PAGE plot for 483 proteins (isoelectric point calculated using IPC2_protein)
Get csv file with sequences according to given criteria:
* You can choose from 21 different methods for calculating isoelectric point
Summary statistics related to proteome-wise predictions
Protein with the lowest isoelectric point:
>sp|Q49416|Y315_MYCGE Uncharacterized protein MG315 OS=Mycoplasma genitalium (strain ATCC 33530 / G-37 / NCTC 10195) OX=243273 GN=MG315 PE=4 SV=1
MM1 pKa = 7.8 AKK3 pKa = 10.05 NKK5 pKa = 10.1 QSVFEE10 pKa = 4.33 EE11 pKa = 4.06 KK12 pKa = 10.62 NYY14 pKa = 9.16 TQTEE18 pKa = 4.21 PEE20 pKa = 4.46 NIFGDD25 pKa = 4.13 LYY27 pKa = 10.96 DD28 pKa = 4.14 GKK30 pKa = 9.92 STVEE34 pKa = 3.81 EE35 pKa = 4.29 DD36 pKa = 3.62 PNIKK40 pKa = 9.73 VAYY43 pKa = 9.7 DD44 pKa = 3.48 ADD46 pKa = 3.92 GNGYY50 pKa = 10.23 YY51 pKa = 9.77 IAFNKK56 pKa = 7.51 EE57 pKa = 3.54 TGVYY61 pKa = 8.99 YY62 pKa = 10.46 DD63 pKa = 4.21 PYY65 pKa = 11.39 GDD67 pKa = 3.73 TEE69 pKa = 4.27 YY70 pKa = 10.98 DD71 pKa = 2.89 ISQLFDD77 pKa = 3.55 EE78 pKa = 5.14 NGNPFVFDD86 pKa = 3.98 EE87 pKa = 4.32 KK88 pKa = 11.11 QEE90 pKa = 4.01 EE91 pKa = 4.06 NDD93 pKa = 3.24 YY94 pKa = 11.22 LKK96 pKa = 11.13 YY97 pKa = 10.76 VGNPDD102 pKa = 3.29 YY103 pKa = 11.33 GSYY106 pKa = 10.8 DD107 pKa = 3.73 EE108 pKa = 4.59 NGEE111 pKa = 4.44 WVWSGYY117 pKa = 9.4 FEE119 pKa = 4.58 NDD121 pKa = 2.39 QWISTKK127 pKa = 10.17 EE128 pKa = 3.94 SQPTDD133 pKa = 3.12 EE134 pKa = 5.56 NYY136 pKa = 10.95 GFDD139 pKa = 3.5 SDD141 pKa = 5.25 LPPEE145 pKa = 4.45 VKK147 pKa = 10.3 QPEE150 pKa = 4.54 SVEE153 pKa = 4.07 DD154 pKa = 3.97 NYY156 pKa = 11.61 GFDD159 pKa = 3.62 NDD161 pKa = 4.66 LPPEE165 pKa = 4.32 VKK167 pKa = 10.29 QPEE170 pKa = 4.54 SVEE173 pKa = 4.07 DD174 pKa = 3.97 NYY176 pKa = 11.61 GFDD179 pKa = 3.62 NDD181 pKa = 4.66 LPPEE185 pKa = 4.32 VKK187 pKa = 10.33 QPEE190 pKa = 4.56 SVVDD194 pKa = 3.83 QPSSDD199 pKa = 4.5 DD200 pKa = 3.74 YY201 pKa = 11.12 FAKK204 pKa = 10.55 QPTDD208 pKa = 3.07 EE209 pKa = 5.49 NYY211 pKa = 10.95 GFDD214 pKa = 3.6 NDD216 pKa = 4.58 LPPEE220 pKa = 4.32 VKK222 pKa = 10.33 QPEE225 pKa = 4.56 SVVDD229 pKa = 3.81 QPSSDD234 pKa = 3.55 DD235 pKa = 3.91 HH236 pKa = 6.48 FAKK239 pKa = 10.46 QPEE242 pKa = 4.67 STTDD246 pKa = 3.06 SYY248 pKa = 12.08 SFDD251 pKa = 3.63 SDD253 pKa = 4.32 LPQPTLDD260 pKa = 3.76 QPSLDD265 pKa = 4.04 DD266 pKa = 3.59 HH267 pKa = 6.0 VQYY270 pKa = 11.32 NFDD273 pKa = 3.2 HH274 pKa = 7.15 HH275 pKa = 7.07 EE276 pKa = 3.93 EE277 pKa = 4.08 LKK279 pKa = 10.82 PVAEE283 pKa = 4.32 EE284 pKa = 3.74 QNNYY288 pKa = 7.85 QVGFDD293 pKa = 3.48 QVQANLDD300 pKa = 3.89 NNEE303 pKa = 4.37 EE304 pKa = 4.04 IQPTAEE310 pKa = 4.33 KK311 pKa = 10.63 KK312 pKa = 8.8 VTTDD316 pKa = 4.07 FEE318 pKa = 4.83 SKK320 pKa = 9.39 QAQVVDD326 pKa = 4.67 SYY328 pKa = 11.47 QLPIDD333 pKa = 4.43 TDD335 pKa = 3.66 QQDD338 pKa = 3.22 QTTFSSSFEE347 pKa = 4.09 TQPTVEE353 pKa = 5.2 QFDD356 pKa = 3.93 QVNSEE361 pKa = 4.27 VNDD364 pKa = 3.4 QFKK367 pKa = 11.16 PEE369 pKa = 3.92 ITKK372 pKa = 10.68 EE373 pKa = 3.99 PVLEE377 pKa = 4.19 SSFNKK382 pKa = 9.67 QDD384 pKa = 3.46 VVEE387 pKa = 4.26 TSDD390 pKa = 5.04 LNSEE394 pKa = 4.35 SNLYY398 pKa = 10.44 SEE400 pKa = 4.7 NNKK403 pKa = 10.25 DD404 pKa = 3.22 ATNNDD409 pKa = 3.48 SLNSEE414 pKa = 5.14 FIQLNSNSEE423 pKa = 4.05 TASDD427 pKa = 3.72 DD428 pKa = 3.2 VHH430 pKa = 7.83 YY431 pKa = 9.98 EE432 pKa = 4.18 SKK434 pKa = 10.7 SEE436 pKa = 4.51 PIHH439 pKa = 6.89 DD440 pKa = 3.96 YY441 pKa = 11.35 KK442 pKa = 11.08 FGSDD446 pKa = 3.38 LSQSNSNNSLEE457 pKa = 4.13 SEE459 pKa = 4.01 PVKK462 pKa = 10.75 FNSEE466 pKa = 4.23 TAPDD470 pKa = 3.34 AHH472 pKa = 6.94 FEE474 pKa = 4.4 SQSEE478 pKa = 4.18 PVDD481 pKa = 3.38 QVQYY485 pKa = 10.96 DD486 pKa = 3.8 IYY488 pKa = 11.12 QNEE491 pKa = 4.23 EE492 pKa = 4.14 LKK494 pKa = 9.5 PTLDD498 pKa = 3.66 QPSSDD503 pKa = 4.97 DD504 pKa = 3.73 YY505 pKa = 11.12 FAKK508 pKa = 10.55 QPTDD512 pKa = 3.07 EE513 pKa = 5.49 NYY515 pKa = 10.95 GFDD518 pKa = 3.6 NDD520 pKa = 4.58 LPPEE524 pKa = 4.32 VKK526 pKa = 10.33 QPEE529 pKa = 4.56 SVVDD533 pKa = 3.81 QPSSDD538 pKa = 3.55 DD539 pKa = 3.91 HH540 pKa = 6.48 FAKK543 pKa = 10.46 QPEE546 pKa = 4.67 STTDD550 pKa = 3.06 SYY552 pKa = 12.08 SFDD555 pKa = 3.63 SDD557 pKa = 4.32 LPQPTLDD564 pKa = 3.76 QPSLDD569 pKa = 4.04 DD570 pKa = 3.59 HH571 pKa = 6.0 VQYY574 pKa = 11.32 NFDD577 pKa = 3.2 HH578 pKa = 7.15 HH579 pKa = 7.07 EE580 pKa = 3.93 EE581 pKa = 4.08 LKK583 pKa = 10.82 PVAEE587 pKa = 4.32 EE588 pKa = 3.74 QNNYY592 pKa = 7.85 QVGFDD597 pKa = 3.48 QVQANLDD604 pKa = 3.89 NNEE607 pKa = 4.37 EE608 pKa = 4.04 IQPTAEE614 pKa = 4.42 KK615 pKa = 10.55 EE616 pKa = 4.16 VTTDD620 pKa = 4.16 FEE622 pKa = 4.82 SKK624 pKa = 9.39 QAQVVDD630 pKa = 4.67 SYY632 pKa = 11.47 QLPIDD637 pKa = 4.43 TDD639 pKa = 3.66 QQDD642 pKa = 3.22 QTTFSSSFEE651 pKa = 4.09 TQPTVEE657 pKa = 5.2 QFDD660 pKa = 3.93 QVNSEE665 pKa = 4.27 VNDD668 pKa = 3.4 QFKK671 pKa = 11.16 PEE673 pKa = 3.92 ITKK676 pKa = 10.68 EE677 pKa = 3.99 PVLEE681 pKa = 4.19 SSFNKK686 pKa = 9.67 QDD688 pKa = 3.4 VVEE691 pKa = 4.29 TSNYY695 pKa = 8.6 TNNLQKK701 pKa = 10.58 FDD703 pKa = 3.65 IQSDD707 pKa = 3.67 NKK709 pKa = 9.66 ITITTKK715 pKa = 10.32 KK716 pKa = 9.98 SSPQIPTTLPISFVSNRR733 pKa = 11.84 IEE735 pKa = 4.09 YY736 pKa = 10.5 KK737 pKa = 10.26 PVEE740 pKa = 4.31 TLALDD745 pKa = 3.74 NKK747 pKa = 10.22 EE748 pKa = 4.17 SQQEE752 pKa = 4.04 QITINSITEE761 pKa = 3.93 DD762 pKa = 3.6 SKK764 pKa = 10.29 TLAKK768 pKa = 9.54 TLSVQLQQINSLNNQSIVTSEE789 pKa = 4.16 SVRR792 pKa = 11.84 LDD794 pKa = 3.46 KK795 pKa = 11.16 KK796 pKa = 10.91 DD797 pKa = 3.64 DD798 pKa = 3.5 QLTINTVNSEE808 pKa = 4.0 DD809 pKa = 3.73 QQPKK813 pKa = 9.92 IEE815 pKa = 4.33 VFVKK819 pKa = 10.42 AKK821 pKa = 10.5 EE822 pKa = 3.97 PVEE825 pKa = 4.03 EE826 pKa = 5.14 HH827 pKa = 7.21 SITQNKK833 pKa = 8.69 QSVEE837 pKa = 4.21 DD838 pKa = 4.46 KK839 pKa = 11.42 SEE841 pKa = 4.0 LDD843 pKa = 3.55 NFNKK847 pKa = 10.34 KK848 pKa = 10.01 SDD850 pKa = 3.47 LYY852 pKa = 11.22 KK853 pKa = 10.38 IISEE857 pKa = 4.37 LKK859 pKa = 10.06 RR860 pKa = 11.84 GEE862 pKa = 4.32 LNPTINFDD870 pKa = 6.18 AIFQMNDD877 pKa = 2.64 YY878 pKa = 10.68 QMSVKK883 pKa = 10.34 QSFIHH888 pKa = 7.09 LNDD891 pKa = 3.29 FVTNYY896 pKa = 10.1 KK897 pKa = 9.89 NQISEE902 pKa = 4.25 RR903 pKa = 11.84 YY904 pKa = 9.6 LIIKK908 pKa = 10.18 KK909 pKa = 9.39 EE910 pKa = 4.04 LQSEE914 pKa = 4.63 LSRR917 pKa = 11.84 LIDD920 pKa = 3.37 QNEE923 pKa = 4.01 NLNVQFNNAKK933 pKa = 10.3 NLTTLQKK940 pKa = 11.17 EE941 pKa = 4.13 EE942 pKa = 4.52 MIRR945 pKa = 11.84 SLASDD950 pKa = 3.51 FAIAYY955 pKa = 7.96 KK956 pKa = 10.34 PSNSYY961 pKa = 10.23 EE962 pKa = 3.94 QLQKK966 pKa = 10.5 SGEE969 pKa = 4.2 IMRR972 pKa = 11.84 HH973 pKa = 3.74 VQRR976 pKa = 11.84 AITEE980 pKa = 4.08 NEE982 pKa = 3.92 KK983 pKa = 10.72 KK984 pKa = 10.08 IEE986 pKa = 4.45 SIQGSLKK993 pKa = 9.69 QLKK996 pKa = 7.76 TVYY999 pKa = 10.18 NSCCEE1004 pKa = 4.09 TIMNNINKK1012 pKa = 9.56 LDD1014 pKa = 3.6 NTLRR1018 pKa = 11.84 FAKK1021 pKa = 10.23 KK1022 pKa = 10.24 EE1023 pKa = 3.85 KK1024 pKa = 10.76 DD1025 pKa = 3.33 PLLLSNFDD1033 pKa = 3.85 SVTDD1037 pKa = 3.71 NGLVEE1042 pKa = 4.81 PNQLMDD1048 pKa = 5.06 DD1049 pKa = 5.21 LIDD1052 pKa = 4.19 FSNTFDD1058 pKa = 4.49 NISNEE1063 pKa = 3.85 QLDD1066 pKa = 3.87 DD1067 pKa = 4.77 FIYY1070 pKa = 11.06 EE1071 pKa = 4.07 NMDD1074 pKa = 3.5 RR1075 pKa = 11.84 NIDD1078 pKa = 3.74 FEE1080 pKa = 5.18 FEE1082 pKa = 3.97 GFNNDD1087 pKa = 4.72 FVDD1090 pKa = 3.62 IDD1092 pKa = 4.19 AKK1094 pKa = 11.61 VMDD1097 pKa = 4.32 SMSAFSVNDD1106 pKa = 3.61 LDD1108 pKa = 5.67 IEE1110 pKa = 4.44 TLVPDD1115 pKa = 3.65 RR1116 pKa = 11.84 TSNFSSLLDD1125 pKa = 3.59 EE1126 pKa = 5.74 DD1127 pKa = 5.16 LFEE1130 pKa = 5.41 SSGDD1134 pKa = 3.6 FSLDD1138 pKa = 3.42 YY1139 pKa = 11.31
Molecular weight: 130.53 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 4.167
IPC2_protein 3.935
IPC_protein 3.948
Toseland 3.745
ProMoST 4.088
Dawson 3.923
Bjellqvist 4.075
Wikipedia 3.821
Rodwell 3.77
Grimsley 3.643
Solomon 3.923
Lehninger 3.872
Nozaki 4.024
DTASelect 4.24
Thurlkill 3.77
EMBOSS 3.834
Sillero 4.062
Patrickios 3.465
IPC_peptide 3.923
IPC2_peptide 4.05
IPC2.peptide.svr19 3.987
Protein with the highest isoelectric point:
>sp|P47414|RS5_MYCGE 30S ribosomal protein S5 OS=Mycoplasma genitalium (strain ATCC 33530 / G-37 / NCTC 10195) OX=243273 GN=rpsE PE=3 SV=1
MM1 pKa = 7.61 AKK3 pKa = 10.14 KK4 pKa = 10.1 SLKK7 pKa = 10.15 VKK9 pKa = 9.97 QSRR12 pKa = 11.84 PNKK15 pKa = 9.88 FSVRR19 pKa = 11.84 DD20 pKa = 3.43 YY21 pKa = 10.38 TRR23 pKa = 11.84 CLRR26 pKa = 11.84 CGRR29 pKa = 11.84 ARR31 pKa = 11.84 AVLSHH36 pKa = 6.81 FGVCRR41 pKa = 11.84 LCFRR45 pKa = 11.84 EE46 pKa = 3.97 LAYY49 pKa = 10.57 AGAIPGVKK57 pKa = 9.35 KK58 pKa = 10.94 ASWW61 pKa = 3.03
Molecular weight: 6.92 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 9.327
IPC2_protein 9.853
IPC_protein 10.628
Toseland 10.979
ProMoST 10.672
Dawson 11.038
Bjellqvist 10.745
Wikipedia 11.242
Rodwell 11.33
Grimsley 11.067
Solomon 11.184
Lehninger 11.155
Nozaki 10.979
DTASelect 10.745
Thurlkill 10.965
EMBOSS 11.374
Sillero 10.979
Patrickios 11.096
IPC_peptide 11.199
IPC2_peptide 9.999
IPC2.peptide.svr19 8.468
Peptides (in silico digests for buttom-up proteomics)
Below you can find
in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.
Try ESI
ChTry ESI
ArgC ESI
LysN ESI
TryLysC ESI
Try MALDI
ChTry MALDI
ArgC MALDI
LysN MALDI
TryLysC MALDI
Try LTQ
ChTry LTQ
ArgC LTQ
LysN LTQ
TryLysC LTQ
Try MSlow
ChTry MSlow
ArgC MSlow
LysN MSlow
TryLysC MSlow
Try MShigh
ChTry MShigh
ArgC MShigh
LysN MShigh
TryLysC MShigh
General Statistics
Number of major isoforms
Number of additional isoforms
Number of all proteins
Number of amino acids
Min. Seq. Length
Max. Seq. Length
Avg. Seq. Length
Avg. Mol. Weight
483
0
483
177065
37
1805
366.6
41.82
Amino acid frequency
Ala
Cys
Asp
Glu
Phe
Gly
His
Ile
Lys
Leu
5.566 ± 0.083
0.825 ± 0.036
4.915 ± 0.081
5.64 ± 0.138
6.158 ± 0.107
4.626 ± 0.095
1.576 ± 0.049
8.261 ± 0.125
9.502 ± 0.139
10.684 ± 0.137
Met
Asn
Gln
Pro
Arg
Ser
Thr
Val
Trp
Tyr
1.528 ± 0.041
7.523 ± 0.116
2.989 ± 0.087
4.736 ± 0.106
3.092 ± 0.075
6.658 ± 0.116
5.397 ± 0.079
6.11 ± 0.098
0.972 ± 0.038
3.241 ± 0.05
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level
Most of the basic statistics you can see at this page can be downloaded from this CSV file
For dipeptide frequency statistics click here