Gorilla smacovirus

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cremevirales; Smacoviridae; Porprismacovirus; Porprismacovirus goras1

Average proteome isoelectric point is 7.52

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0B5GST2|A0A0B5GST2_9VIRU Rep protein OS=Gorilla smacovirus OX=1603068 GN=rep PE=4 SV=1
MM1 pKa = 6.39MAFRR5 pKa = 11.84KK6 pKa = 9.5RR7 pKa = 11.84HH8 pKa = 4.43GSKK11 pKa = 10.24VLHH14 pKa = 6.69QKK16 pKa = 8.52FQWFFDD22 pKa = 3.94LQTKK26 pKa = 9.58ADD28 pKa = 3.74EE29 pKa = 4.13MQIMEE34 pKa = 4.47VQAGGYY40 pKa = 9.04GVYY43 pKa = 10.16KK44 pKa = 10.34RR45 pKa = 11.84LYY47 pKa = 9.09PFFSAFKK54 pKa = 8.38YY55 pKa = 10.37YY56 pKa = 10.95KK57 pKa = 10.56LGGVKK62 pKa = 9.37MKK64 pKa = 9.33MIPASTLPVDD74 pKa = 3.87PTGLSYY80 pKa = 10.68EE81 pKa = 4.23AGEE84 pKa = 4.26NTVDD88 pKa = 4.85PRR90 pKa = 11.84DD91 pKa = 3.48QLTPGLTRR99 pKa = 11.84ITNGEE104 pKa = 4.09DD105 pKa = 3.47VYY107 pKa = 11.64TDD109 pKa = 3.53LTGLTGDD116 pKa = 3.71QQRR119 pKa = 11.84EE120 pKa = 4.43LYY122 pKa = 9.6EE123 pKa = 4.92SMMIDD128 pKa = 3.25QRR130 pKa = 11.84WFKK133 pKa = 10.13WQLQSGLSRR142 pKa = 11.84YY143 pKa = 8.4ARR145 pKa = 11.84PMYY148 pKa = 8.75WQIGQLHH155 pKa = 6.12QDD157 pKa = 3.76YY158 pKa = 11.0LPGSVRR164 pKa = 11.84NLADD168 pKa = 3.2TSLTDD173 pKa = 3.55DD174 pKa = 4.45CASITAVYY182 pKa = 10.49DD183 pKa = 3.58GANTSGPSAAPITVAADD200 pKa = 3.18ASDD203 pKa = 3.55PRR205 pKa = 11.84GLFQVGHH212 pKa = 7.01RR213 pKa = 11.84GRR215 pKa = 11.84LGWMPTDD222 pKa = 3.53GVLLKK227 pKa = 9.68GTSGGTGTVHH237 pKa = 6.14AQAVEE242 pKa = 3.92AAIPAVNVFTVVTPPMHH259 pKa = 5.75KK260 pKa = 8.32TNYY263 pKa = 7.64YY264 pKa = 8.29YY265 pKa = 10.56RR266 pKa = 11.84VFVTEE271 pKa = 4.34DD272 pKa = 3.84VYY274 pKa = 11.28FKK276 pKa = 11.2SPVVVGYY283 pKa = 9.58QNYY286 pKa = 9.62RR287 pKa = 11.84SIDD290 pKa = 3.52RR291 pKa = 11.84FVQPQFPVAKK301 pKa = 9.25LPTVSSPATDD311 pKa = 3.34SNKK314 pKa = 9.71PFPTNDD320 pKa = 3.36GEE322 pKa = 4.31QLPEE326 pKa = 3.82VLII329 pKa = 4.48

Molecular weight: 36.68 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0B5GST2|A0A0B5GST2_9VIRU Rep protein OS=Gorilla smacovirus OX=1603068 GN=rep PE=4 SV=1
MM1 pKa = 6.62TQTWMLTVPRR11 pKa = 11.84RR12 pKa = 11.84KK13 pKa = 8.18TEE15 pKa = 4.0KK16 pKa = 9.83EE17 pKa = 3.46WMGIYY22 pKa = 9.84KK23 pKa = 9.73WLRR26 pKa = 11.84DD27 pKa = 3.58NDD29 pKa = 3.68VHH31 pKa = 6.67KK32 pKa = 9.25WTVAMEE38 pKa = 4.34TGSNGYY44 pKa = 8.07DD45 pKa = 2.53HH46 pKa = 6.6WQIRR50 pKa = 11.84FQVGKK55 pKa = 7.81TFKK58 pKa = 10.19QLKK61 pKa = 9.63KK62 pKa = 8.91EE63 pKa = 4.17WGPKK67 pKa = 9.16AHH69 pKa = 6.94IEE71 pKa = 4.12EE72 pKa = 5.48ASDD75 pKa = 2.77TWEE78 pKa = 4.11YY79 pKa = 10.5EE80 pKa = 4.14RR81 pKa = 11.84KK82 pKa = 10.05SGMFFSSDD90 pKa = 3.26DD91 pKa = 3.56TPEE94 pKa = 3.65VRR96 pKa = 11.84KK97 pKa = 10.25CRR99 pKa = 11.84FGRR102 pKa = 11.84LNWRR106 pKa = 11.84QRR108 pKa = 11.84TIVRR112 pKa = 11.84AVQDD116 pKa = 3.64TNDD119 pKa = 3.5RR120 pKa = 11.84EE121 pKa = 4.28IVVWYY126 pKa = 10.2DD127 pKa = 3.04PDD129 pKa = 4.09GNKK132 pKa = 10.05GKK134 pKa = 10.18SWLLGHH140 pKa = 7.53LYY142 pKa = 8.31EE143 pKa = 5.31TGQAWVIQAQDD154 pKa = 3.46TVKK157 pKa = 11.18GIIQDD162 pKa = 3.87CASEE166 pKa = 4.62FINHH170 pKa = 5.19GWRR173 pKa = 11.84PIVVIDD179 pKa = 5.32IPRR182 pKa = 11.84TWKK185 pKa = 7.87WTSDD189 pKa = 3.27LYY191 pKa = 11.39VAIEE195 pKa = 4.27RR196 pKa = 11.84IKK198 pKa = 11.05DD199 pKa = 3.64GLIKK203 pKa = 10.46DD204 pKa = 3.5PRR206 pKa = 11.84YY207 pKa = 10.1NSKK210 pKa = 8.3TVHH213 pKa = 4.97IRR215 pKa = 11.84GVKK218 pKa = 9.98VLITCNTMPKK228 pKa = 9.15RR229 pKa = 11.84DD230 pKa = 4.07KK231 pKa = 11.05LSADD235 pKa = 2.65RR236 pKa = 11.84WVIVEE241 pKa = 4.01LL242 pKa = 4.3

Molecular weight: 28.73 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

571

242

329

285.5

32.71

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.604 ± 1.092

0.701 ± 0.312

6.83 ± 0.352

4.378 ± 0.815

3.678 ± 0.694

7.531 ± 0.772

2.102 ± 0.219

4.904 ± 1.468

6.305 ± 1.375

6.305 ± 0.78

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.977 ± 0.288

2.977 ± 0.19

5.429 ± 1.23

5.254 ± 0.65

6.13 ± 0.997

5.079 ± 0.548

7.706 ± 0.155

8.231 ± 0.22

3.503 ± 1.562

4.378 ± 0.861
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski