Streptococcus satellite phage Javan442

Taxonomy: Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae

Average proteome isoelectric point is 7.36

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 19 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4D5ZNF6|A0A4D5ZNF6_9VIRU Putative DNA-binding phage protein OS=Streptococcus satellite phage Javan442 OX=2558707 GN=JavanS442_0015 PE=4 SV=1
MM1 pKa = 6.88EE2 pKa = 5.53TYY4 pKa = 10.93NFDD7 pKa = 4.58DD8 pKa = 4.34KK9 pKa = 11.32YY10 pKa = 7.27TTKK13 pKa = 10.45RR14 pKa = 11.84VAQLQDD20 pKa = 3.02MDD22 pKa = 4.08KK23 pKa = 10.96QDD25 pKa = 5.84LINLMAKK32 pKa = 10.35YY33 pKa = 9.87EE34 pKa = 4.31LEE36 pKa = 4.16LLDD39 pKa = 3.8YY40 pKa = 11.05ADD42 pKa = 4.71RR43 pKa = 11.84LLSEE47 pKa = 5.02EE48 pKa = 5.23PISMDD53 pKa = 3.56AGTGCGTVQLLGQSVTEE70 pKa = 4.73LVSQLDD76 pKa = 3.14KK77 pKa = 11.33DD78 pKa = 3.72KK79 pKa = 10.21EE80 pKa = 4.29YY81 pKa = 11.16KK82 pKa = 10.47GIYY85 pKa = 9.69SII87 pKa = 5.34

Molecular weight: 9.95 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4D5ZQF5|A0A4D5ZQF5_9VIRU Uncharacterized protein OS=Streptococcus satellite phage Javan442 OX=2558707 GN=JavanS442_0008 PE=4 SV=1
MM1 pKa = 7.92KK2 pKa = 9.25ITEE5 pKa = 4.18YY6 pKa = 10.59KK7 pKa = 9.93KK8 pKa = 10.55KK9 pKa = 10.38NGTIMYY15 pKa = 7.67RR16 pKa = 11.84TQVYY20 pKa = 10.49LGVDD24 pKa = 2.83KK25 pKa = 11.06VTGNKK30 pKa = 9.65ARR32 pKa = 11.84TSVSGRR38 pKa = 11.84TKK40 pKa = 10.48KK41 pKa = 10.48ALKK44 pKa = 10.75NNIKK48 pKa = 9.31LAKK51 pKa = 9.2MSFGG55 pKa = 3.54

Molecular weight: 6.2 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

19

0

19

2007

37

320

105.6

12.32

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

4.833 ± 0.489

0.997 ± 0.306

5.929 ± 0.482

7.623 ± 0.794

3.687 ± 0.459

4.783 ± 0.427

1.545 ± 0.333

7.623 ± 0.287

10.414 ± 0.798

10.314 ± 0.355

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.79 ± 0.368

5.232 ± 0.489

2.392 ± 0.258

4.534 ± 0.476

5.481 ± 0.437

5.331 ± 0.575

5.63 ± 0.509

4.933 ± 0.386

0.897 ± 0.216

5.032 ± 0.397
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski