Aedes aegypti (Yellowfever mosquito) (Culex aegypti)
Average proteome isoelectric point is 6.59
Get precalculated fractions of proteins
Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
All
Note: above files contain also dissociation constants (pKa)
Virtual 2D-PAGE plot for 21531 proteins (isoelectric point calculated using IPC2_protein)
Get csv file with sequences according to given criteria:
* You can choose from 21 different methods for calculating isoelectric point
Summary statistics related to proteome-wise predictions
Protein with the lowest isoelectric point:
>tr|Q16J97|Q16J97_AEDAE Isoform of A0A6I8TFF7 AAEL013402-PB (Fragment) OS=Aedes aegypti OX=7159 GN=AAEL013402 PE=4 SV=1
MM1 pKa = 7.46 NSCEE5 pKa = 4.5 LKK7 pKa = 9.93 TIGWNTKK14 pKa = 8.61 KK15 pKa = 10.45 RR16 pKa = 11.84 CSSEE20 pKa = 3.97 VAEE23 pKa = 5.39 LIAPSIPDD31 pKa = 3.36 VASFSYY37 pKa = 8.93 ITLAKK42 pKa = 9.89 EE43 pKa = 3.97 SPNRR47 pKa = 11.84 VLEE50 pKa = 4.22 SDD52 pKa = 3.4 EE53 pKa = 5.47 DD54 pKa = 3.92 NYY56 pKa = 11.59 NSFNEE61 pKa = 4.06 QEE63 pKa = 3.71 TDD65 pKa = 3.01 ICHH68 pKa = 6.85 DD69 pKa = 3.85 SSDD72 pKa = 3.99 ISDD75 pKa = 4.1 SDD77 pKa = 3.64 TDD79 pKa = 4.13 SQCSSISQPSLDD91 pKa = 4.5 DD92 pKa = 3.77 GRR94 pKa = 11.84 VDD96 pKa = 4.24 TIATMEE102 pKa = 4.08 VVEE105 pKa = 4.58 YY106 pKa = 9.64 EE107 pKa = 4.33 VASATEE113 pKa = 4.16 SEE115 pKa = 4.68 DD116 pKa = 4.68 DD117 pKa = 3.75 YY118 pKa = 11.98 SSDD121 pKa = 3.3 VSSGTEE127 pKa = 3.36 VRR129 pKa = 11.84 LYY131 pKa = 10.73 VGSICTSGCRR141 pKa = 3.69
Molecular weight: 15.36 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 3.722
IPC2_protein 3.859
IPC_protein 3.834
Toseland 3.63
ProMoST 3.986
Dawson 3.808
Bjellqvist 3.973
Wikipedia 3.732
Rodwell 3.656
Grimsley 3.541
Solomon 3.808
Lehninger 3.757
Nozaki 3.923
DTASelect 4.126
Thurlkill 3.681
EMBOSS 3.745
Sillero 3.948
Patrickios 1.036
IPC_peptide 3.795
IPC2_peptide 3.935
IPC2.peptide.svr19 3.842
Protein with the highest isoelectric point:
>tr|A0A6I8TQK0|A0A6I8TQK0_AEDAE Spectrin OS=Aedes aegypti OX=7159 GN=5566099 PE=3 SV=1
SS1 pKa = 6.85 SSWKK5 pKa = 9.92 RR6 pKa = 11.84 SSSSSWKK13 pKa = 9.94 RR14 pKa = 11.84 SSSSSWKK21 pKa = 9.94 RR22 pKa = 11.84 SSSSSWKK29 pKa = 9.94 RR30 pKa = 11.84 SSSSSWKK37 pKa = 9.94 RR38 pKa = 11.84 SSSSSWKK45 pKa = 9.94 RR46 pKa = 11.84 SSSSSWKK53 pKa = 9.94 RR54 pKa = 11.84 SSSSSWKK61 pKa = 9.94 RR62 pKa = 11.84 SSSSSWKK69 pKa = 9.94 RR70 pKa = 11.84 SSSSSWKK77 pKa = 9.94 RR78 pKa = 11.84 SSSSSWKK85 pKa = 9.94 RR86 pKa = 11.84 SSSSSWKK93 pKa = 9.83 RR94 pKa = 11.84 SSFSFWNRR102 pKa = 11.84 SSFSSWKK109 pKa = 9.92 RR110 pKa = 11.84 SSSSSWKK117 pKa = 10.08 RR118 pKa = 11.84 SFSSFWKK125 pKa = 10.08 RR126 pKa = 11.84 SSFSFWKK133 pKa = 10.22 RR134 pKa = 11.84 SSSSSWKK141 pKa = 9.94 RR142 pKa = 11.84 SSSSSWKK149 pKa = 9.94 RR150 pKa = 11.84 SSSSSWKK157 pKa = 9.94 RR158 pKa = 11.84 SSSSSWKK165 pKa = 9.94 RR166 pKa = 11.84 SSSSSWKK173 pKa = 9.98 RR174 pKa = 11.84 SSSS177 pKa = 3.26
Molecular weight: 20.44 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 9.452
IPC2_protein 11.594
IPC_protein 13.159
Toseland 13.334
ProMoST 13.817
Dawson 13.334
Bjellqvist 13.32
Wikipedia 13.803
Rodwell 13.13
Grimsley 13.378
Solomon 13.832
Lehninger 13.729
Nozaki 13.334
DTASelect 13.32
Thurlkill 13.334
EMBOSS 13.832
Sillero 13.334
Patrickios 12.837
IPC_peptide 13.832
IPC2_peptide 12.822
IPC2.peptide.svr19 9.421
Peptides (in silico digests for buttom-up proteomics)
Below you can find
in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.
Try ESI
ChTry ESI
ArgC ESI
LysN ESI
TryLysC ESI
Try MALDI
ChTry MALDI
ArgC MALDI
LysN MALDI
TryLysC MALDI
Try LTQ
ChTry LTQ
ArgC LTQ
LysN LTQ
TryLysC LTQ
Try MSlow
ChTry MSlow
ArgC MSlow
LysN MSlow
TryLysC MSlow
Try MShigh
ChTry MShigh
ArgC MShigh
LysN MShigh
TryLysC MShigh
General Statistics
Number of major isoforms
Number of additional isoforms
Number of all proteins
Number of amino acids
Min. Seq. Length
Max. Seq. Length
Avg. Seq. Length
Avg. Mol. Weight
14563
6968
21531
14460630
31
16267
671.6
75.04
Amino acid frequency
Ala
Cys
Asp
Glu
Phe
Gly
His
Ile
Lys
Leu
6.549 ± 0.014
1.795 ± 0.018
5.519 ± 0.013
6.572 ± 0.019
3.532 ± 0.013
5.887 ± 0.017
2.629 ± 0.011
5.285 ± 0.012
5.995 ± 0.018
8.577 ± 0.025
Met
Asn
Gln
Pro
Arg
Ser
Thr
Val
Trp
Tyr
2.313 ± 0.007
5.031 ± 0.014
5.527 ± 0.024
4.835 ± 0.023
5.321 ± 0.012
8.812 ± 0.027
5.95 ± 0.019
5.989 ± 0.012
0.943 ± 0.005
2.94 ± 0.011
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level
Most of the basic statistics you can see at this page can be downloaded from this CSV file
For dipeptide frequency statistics click here