Celeribacter phage P12053L

Taxonomy: Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Zobellviridae; Cobavirinae; Siovirus; Celeribacter virus P12053L

Average proteome isoelectric point is 5.8

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 56 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|I6S6K3|I6S6K3_9CAUD Putative phage tail fiber protein OS=Celeribacter phage P12053L OX=1197951 GN=P12053L_55 PE=4 SV=1
MM1 pKa = 7.59AKK3 pKa = 10.07KK4 pKa = 8.81PTVTTLQSGFNSTEE18 pKa = 3.77VLNSNFEE25 pKa = 4.19KK26 pKa = 10.87LRR28 pKa = 11.84DD29 pKa = 3.79AFDD32 pKa = 3.51NTLSLDD38 pKa = 3.47GSTPNAMEE46 pKa = 5.54ADD48 pKa = 3.65LDD50 pKa = 4.45LNGNNLIGAVGLLVNGTDD68 pKa = 3.62YY69 pKa = 11.12LAEE72 pKa = 4.04VEE74 pKa = 4.24AAKK77 pKa = 10.41AAALVAQAAAEE88 pKa = 4.08TAEE91 pKa = 4.5TNAEE95 pKa = 4.1TAEE98 pKa = 4.44TNAEE102 pKa = 4.16TAEE105 pKa = 4.04TAAASSASAASTSATNAATSATAASLSEE133 pKa = 3.83TAAASSEE140 pKa = 4.29ANTSASEE147 pKa = 4.06TAAGLSEE154 pKa = 4.03TAAATSEE161 pKa = 4.02TAAALSEE168 pKa = 4.36ANASASATAAATSATNASTSEE189 pKa = 4.07TNAAASATEE198 pKa = 3.99AATSEE203 pKa = 4.32ANAATSATNASTSEE217 pKa = 4.12TNAATSATAALASQTAAATSEE238 pKa = 4.72SNASTSAANAATSEE252 pKa = 4.61TNASTSASTASTKK265 pKa = 9.68ATEE268 pKa = 4.37AATSATNASTSEE280 pKa = 4.12TNAATSATSAATSATSAQASKK301 pKa = 10.94DD302 pKa = 3.5AALAALDD309 pKa = 4.23SFDD312 pKa = 5.84DD313 pKa = 4.23RR314 pKa = 11.84YY315 pKa = 10.94LGQKK319 pKa = 8.42ATDD322 pKa = 3.64PTLDD326 pKa = 3.42NDD328 pKa = 3.56GDD330 pKa = 4.24ALVTGALYY338 pKa = 10.63FNTADD343 pKa = 3.92DD344 pKa = 3.68VMKK347 pKa = 10.64VYY349 pKa = 10.56EE350 pKa = 4.21GSVWVAAYY358 pKa = 10.26ASLSGALLSANSLSDD373 pKa = 3.66VLNAAAARR381 pKa = 11.84TNLGLGTAATTASTDD396 pKa = 3.38YY397 pKa = 9.88ATAAQGSLADD407 pKa = 4.0SALQSGDD414 pKa = 3.82NISALTNDD422 pKa = 3.7AGYY425 pKa = 6.08TTNVGDD431 pKa = 3.89ITNVSAGTGLSGGGASGTVTISHH454 pKa = 7.61ADD456 pKa = 3.35TSSQGSVNNSGATVIQDD473 pKa = 3.54VTLDD477 pKa = 3.63TYY479 pKa = 11.63GHH481 pKa = 5.06VTGLASKK488 pKa = 8.75TLTAADD494 pKa = 3.44VGAITGNQTITLSGDD509 pKa = 3.19VSGSGTTSIVVTVADD524 pKa = 4.61DD525 pKa = 3.6SHH527 pKa = 7.82NHH529 pKa = 5.91VISNVDD535 pKa = 3.46GLQTALDD542 pKa = 3.83AKK544 pKa = 10.07LASSSYY550 pKa = 8.92TASDD554 pKa = 3.35VLTKK558 pKa = 10.85VKK560 pKa = 9.75TVDD563 pKa = 3.49GSGSGLDD570 pKa = 3.96ADD572 pKa = 5.38LLDD575 pKa = 4.65GQHH578 pKa = 5.85GSYY581 pKa = 10.51YY582 pKa = 10.04YY583 pKa = 10.89SPSNPPAASAPSSAQVGSATAGLSVGAVGTYY614 pKa = 10.32AYY616 pKa = 10.46LYY618 pKa = 8.5YY619 pKa = 10.53YY620 pKa = 9.91PRR622 pKa = 11.84TTTSPGTTRR631 pKa = 11.84AGSDD635 pKa = 2.95LRR637 pKa = 11.84YY638 pKa = 9.69ANGYY642 pKa = 8.54AAHH645 pKa = 6.57TGYY648 pKa = 9.18TGGGTPSGTWRR659 pKa = 11.84CMGYY663 pKa = 9.72IFDD666 pKa = 4.01QAGGTGTDD674 pKa = 3.37TTTVWLRR681 pKa = 11.84ISS683 pKa = 3.26

Molecular weight: 66.57 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|I6RT32|I6RT32_9CAUD Uncharacterized protein OS=Celeribacter phage P12053L OX=1197951 GN=P12053L_48 PE=4 SV=1
MM1 pKa = 7.87AIFTAIGAALTAATGAAAFTAGVATVGAVVGVGGTIASGKK41 pKa = 8.38AARR44 pKa = 11.84RR45 pKa = 11.84AASAQQKK52 pKa = 9.68SQDD55 pKa = 3.76LQAKK59 pKa = 6.99RR60 pKa = 11.84QRR62 pKa = 11.84RR63 pKa = 11.84AAIRR67 pKa = 11.84SNILASARR75 pKa = 11.84ARR77 pKa = 11.84ASAQSAGTAQSSGLSGAIGAGRR99 pKa = 11.84SQLGAEE105 pKa = 4.56LGFGTQMSGLSANISKK121 pKa = 10.64FNMQAQTYY129 pKa = 10.35GDD131 pKa = 3.44IAKK134 pKa = 10.27LGFSAAGNAPALGGYY149 pKa = 10.03AEE151 pKa = 4.58EE152 pKa = 4.65FGLFNKK158 pKa = 10.19

Molecular weight: 15.47 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

56

0

56

12540

46

1487

223.9

24.86

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

9.123 ± 0.833

0.949 ± 0.192

6.818 ± 0.212

7.073 ± 0.28

3.596 ± 0.224

7.121 ± 0.301

1.595 ± 0.167

4.777 ± 0.308

6.643 ± 0.442

8.094 ± 0.182

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.576 ± 0.167

4.609 ± 0.195

3.246 ± 0.179

3.517 ± 0.204

4.617 ± 0.321

6.89 ± 0.499

6.834 ± 0.516

6.722 ± 0.278

1.38 ± 0.18

3.82 ± 0.243
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski